RNA–Protein interactions for RNA: ENST00000506163.5

SMN1-204, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN1, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-204ENST00000506163 RHPN1-AS1Q9BWJ2 59 aa13.36□□□□□ -0.27
SMN1-204ENST00000506163 TRAV14DV4A0A0A6YYC5 116 aa13.35□□□□□ -0.27
SMN1-204ENST00000506163 TRAV25A0A0B4J276 109 aa13.35□□□□□ -0.27
SMN1-204ENST00000506163 WRBO00258 174 aa13.35□□□□□ -0.27
SMN1-204ENST00000506163 MED6O75586 246 aa13.35□□□□□ -0.27
SMN1-204ENST00000506163 IFNA4P05014 189 aa13.35□□□□□ -0.27
SMN1-204ENST00000506163 SLC16A13Q7RTY0 426 aa13.35□□□□□ -0.27
SMN1-204ENST00000506163 GTSCR1Q86UQ5 136 aa13.35□□□□□ -0.27
SMN1-204ENST00000506163 NOXA1Q86UR1 476 aa13.35□□□□□ -0.27
SMN1-204ENST00000506163 IFNA21P01568 189 aa13.34□□□□□ -0.27
SMN1-204ENST00000506163 OR10J1P30954 320 aa13.34□□□□□ -0.27
SMN1-204ENST00000506163 ATP5IP56385 69 aaPredicted RBP13.34□□□□□ -0.27
SMN1-204ENST00000506163 MZT2BQ6NZ67 158 aa13.34□□□□□ -0.27
SMN1-204ENST00000506163 DEFB125Q8N687 156 aa13.34□□□□□ -0.27
SMN1-204ENST00000506163 ZNF431Q8TF32 576 aaPredicted RBP13.34□□□□□ -0.27
SMN1-204ENST00000506163 ACY3Q96HD9 319 aa13.34□□□□□ -0.27
SMN1-204ENST00000506163 TENM3Q9P273 2699 aa13.34□□□□□ -0.27
SMN1-204ENST00000506163 IGKV1D-37A0A075B6S9 117 aa13.33□□□□□ -0.28
SMN1-204ENST00000506163 TRAV30A0A087WSZ9 112 aa13.33□□□□□ -0.28
SMN1-204ENST00000506163 PRSS46E5RG02 174 aa13.33□□□□□ -0.28
SMN1-204ENST00000506163 CCSO14618 274 aa13.33□□□□□ -0.28
SMN1-204ENST00000506163 TSPAN4O14817 238 aa13.33□□□□□ -0.28
SMN1-204ENST00000506163 PAX9P55771 341 aa13.33□□□□□ -0.28
SMN1-204ENST00000506163 GAMTQ14353 236 aa13.33□□□□□ -0.28
SMN1-204ENST00000506163 IAH1Q2TAA2 248 aaPredicted RBP13.33□□□□□ -0.28
SMN1-204ENST00000506163 FAM90A2PQ658T7 463 aa13.33□□□□□ -0.28
SMN1-204ENST00000506163 ETFRF1Q6IPR1 90 aa13.33□□□□□ -0.28
SMN1-204ENST00000506163 RBPMS2Q6ZRY4 209 aaKnown RBP13.33□□□□□ -0.28
SMN1-204ENST00000506163 ST8SIA2Q92186 375 aa13.33□□□□□ -0.28
SMN1-204ENST00000506163 IGHV3-66A0A0C4DH42 116 aa13.32□□□□□ -0.28
SMN1-204ENST00000506163 GPX4P36969 197 aaPredicted RBP13.32□□□□□ -0.28
SMN1-204ENST00000506163 NKX2-1P43699 371 aaPredicted RBP13.32□□□□□ -0.28
SMN1-204ENST00000506163 YPEL3P61236 119 aaPredicted RBP13.32□□□□□ -0.28
SMN1-204ENST00000506163 LINC00322Q6ZN03 302 aaPredicted RBP13.32□□□□□ -0.28
SMN1-204ENST00000506163 NRARPQ7Z6K4 114 aa13.32□□□□□ -0.28
SMN1-204ENST00000506163 ZBTB8BQ8NAP8 495 aaPredicted RBP13.32□□□□□ -0.28
SMN1-204ENST00000506163 OR1S2Q8NGQ3 325 aa13.32□□□□□ -0.28
SMN1-204ENST00000506163 VSIRQ9H7M9 311 aa13.32□□□□□ -0.28
SMN1-204ENST00000506163 OR11H12B2RN74 326 aa13.31□□□□□ -0.28
SMN1-204ENST00000506163 H3BP45 60 aa13.31□□□□□ -0.28
SMN1-204ENST00000506163 NHLRC4P0CG21 123 aaPredicted RBP13.31□□□□□ -0.28
SMN1-204ENST00000506163 SPANXN5Q5MJ07 72 aa13.31□□□□□ -0.28
SMN1-204ENST00000506163 CIB3Q96Q77 187 aaPredicted RBP13.31□□□□□ -0.28
SMN1-204ENST00000506163 PAIP2BQ9ULR5 123 aaKnown RBP13.31□□□□□ -0.28
SMN1-204ENST00000506163 NBEAL2Q6ZNJ1 2754 aa13.31□□□□□ -0.28
SMN1-204ENST00000506163 RBMY1BA6NDE4 496 aaKnown RBP13.3□□□□□ -0.28
SMN1-204ENST00000506163 RBMY1EA6NEQ0 496 aaKnown RBP13.3□□□□□ -0.28
SMN1-204ENST00000506163 RBMY1DP0C7P1 496 aaKnown RBP13.3□□□□□ -0.28
SMN1-204ENST00000506163 CRYBB3P26998 211 aa13.3□□□□□ -0.28
SMN1-204ENST00000506163 C12orf45Q8N5I9 185 aaPredicted RBP13.3□□□□□ -0.28
SMN1-204ENST00000506163 CITED4Q96RK1 184 aa13.3□□□□□ -0.28
SMN1-204ENST00000506163 SPAG8Q99932 426 aaPredicted RBP13.3□□□□□ -0.28
SMN1-204ENST00000506163 GINS3Q9BRX5 216 aa13.3□□□□□ -0.28
SMN1-204ENST00000506163 GSKIPQ9P0R6 139 aa13.3□□□□□ -0.28
SMN1-204ENST00000506163 RCL1Q9Y2P8 373 aaKnown RBP13.3□□□□□ -0.28
SMN1-204ENST00000506163 STAB2Q8WWQ8 2551 aa13.3□□□□□ -0.28
SMN1-204ENST00000506163 IGKV1OR2-108A0A075B7D4 117 aa13.3□□□□□ -0.28
SMN1-204ENST00000506163 PMS2P5A8MQ11 134 aa13.3□□□□□ -0.28
SMN1-204ENST00000506163 SSSCA1O60232 199 aa13.3□□□□□ -0.28
SMN1-204ENST00000506163 CCNKO75909 580 aa13.3□□□□□ -0.28
SMN1-204ENST00000506163 MBPP02686 304 aaPredicted RBP13.3□□□□□ -0.28
SMN1-204ENST00000506163 IL5P05113 134 aa13.3□□□□□ -0.28
SMN1-204ENST00000506163 RAB11AP62491 216 aa13.3□□□□□ -0.28
SMN1-204ENST00000506163 USF2Q15853 346 aaPredicted RBP13.3□□□□□ -0.28
SMN1-204ENST00000506163 HAGHQ16775 308 aa13.3□□□□□ -0.28
SMN1-204ENST00000506163 SMIM8Q96KF7 97 aa13.3□□□□□ -0.28
SMN1-204ENST00000506163 TUBA4BQ9H853 241 aa13.3□□□□□ -0.28
SMN1-204ENST00000506163 U3KQE9 123 aa13.3□□□□□ -0.28
SMN1-204ENST00000506163 DFFBO76075 338 aa13.29□□□□□ -0.28
SMN1-204ENST00000506163 PSG1P11464 419 aa13.29□□□□□ -0.28
SMN1-204ENST00000506163 NPPCP23582 126 aa13.29□□□□□ -0.28
SMN1-204ENST00000506163 ZNF90Q03938 601 aa13.29□□□□□ -0.28
SMN1-204ENST00000506163 LAMTOR1Q6IAA8 161 aa13.29□□□□□ -0.28
SMN1-204ENST00000506163 ENKURQ8TC29 256 aa13.29□□□□□ -0.28
SMN1-204ENST00000506163 Q8WTZ3 238 aa13.29□□□□□ -0.28
SMN1-204ENST00000506163 SRD5A3Q9H8P0 318 aa13.29□□□□□ -0.28
SMN1-204ENST00000506163 PSENENQ9NZ42 101 aa13.29□□□□□ -0.28
SMN1-204ENST00000506163 IGKV3-7A0A075B6H7 116 aa13.28□□□□□ -0.28
SMN1-204ENST00000506163 SCGB1D2O95969 90 aa13.28□□□□□ -0.28
SMN1-204ENST00000506163 TOMM40O96008 361 aa13.28□□□□□ -0.28
SMN1-204ENST00000506163 RD3LP0DJH9 198 aa13.28□□□□□ -0.28
SMN1-204ENST00000506163 IL15RAQ13261 267 aa13.28□□□□□ -0.28
SMN1-204ENST00000506163 ODF3L2Q3SX64 289 aa13.28□□□□□ -0.28
SMN1-204ENST00000506163 TCF24Q7RTU0 167 aa13.28□□□□□ -0.28
SMN1-204ENST00000506163 GBGT1Q8N5D6 347 aa13.28□□□□□ -0.28
SMN1-204ENST00000506163 SLC35E1Q96K37 410 aa13.28□□□□□ -0.28
SMN1-204ENST00000506163 METTL26Q96S19 204 aa13.28□□□□□ -0.28
SMN1-204ENST00000506163 TM2D3Q9BRN9 247 aa13.28□□□□□ -0.28
SMN1-204ENST00000506163 UBQLN2Q9UHD9 624 aa13.28□□□□□ -0.28
SMN1-204ENST00000506163 STRAPQ9Y3F4 350 aaKnown RBP13.28□□□□□ -0.28
SMN1-204ENST00000506163 U3KQK5 164 aa13.28□□□□□ -0.28
SMN1-204ENST00000506163 FAM25EA8MYX2 175 aa13.27□□□□□ -0.29
SMN1-204ENST00000506163 IL4P05112 153 aa13.27□□□□□ -0.29
SMN1-204ENST00000506163 TFPI2P48307 235 aa13.27□□□□□ -0.29
SMN1-204ENST00000506163 RPP30P78346 268 aaKnown RBP13.27□□□□□ -0.29
SMN1-204ENST00000506163 TMEM14EPQ6UXP3 125 aa13.27□□□□□ -0.29
SMN1-204ENST00000506163 C7orf66A4D0T2 115 aa13.26□□□□□ -0.29
SMN1-204ENST00000506163 SCGB2A1O75556 95 aa13.26□□□□□ -0.29
SMN1-204ENST00000506163 THAP8Q8NA92 274 aa13.26□□□□□ -0.29
SMN1-204ENST00000506163 OR51G1Q8NGK1 321 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 196.5 ms