RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 OTORQ9NRC9 128 aa14.27□□□□□ -0.13
HMGXB3-201ENST00000502717 GAGE12BA1L429 117 aa14.27□□□□□ -0.13
HMGXB3-201ENST00000502717 PDLIM4P50479 330 aa14.27□□□□□ -0.13
HMGXB3-201ENST00000502717 CFHR1Q03591 330 aa14.27□□□□□ -0.13
HMGXB3-201ENST00000502717 UNQ6494/PRO21346Q6UXR6 183 aa14.27□□□□□ -0.13
HMGXB3-201ENST00000502717 SAA2-SAA4A0A096LPE2 208 aa14.26□□□□□ -0.13
HMGXB3-201ENST00000502717 SAA2P0DJI9 122 aaPredicted RBP14.26□□□□□ -0.13
HMGXB3-201ENST00000502717 PSG1P11464 419 aa14.26□□□□□ -0.13
HMGXB3-201ENST00000502717 SYS1-DBNDD2H3BUS1 97 aa14.26□□□□□ -0.13
HMGXB3-201ENST00000502717 FOXH1O75593 365 aa14.26□□□□□ -0.13
HMGXB3-201ENST00000502717 DMRTC2Q8IXT2 367 aaPredicted RBP14.26□□□□□ -0.13
HMGXB3-201ENST00000502717 SPTBN1Q01082 2364 aaKnown RBP14.26□□□□□ -0.13
HMGXB3-201ENST00000502717 TCRBV4S1A1TA0A5B7 111 aa14.26□□□□□ -0.13
HMGXB3-201ENST00000502717 TMEM8BA6NDV4 472 aa14.26□□□□□ -0.13
HMGXB3-201ENST00000502717 HBDP02042 147 aa14.26□□□□□ -0.13
HMGXB3-201ENST00000502717 MFAP4P55083 255 aa14.26□□□□□ -0.13
HMGXB3-201ENST00000502717 TPTE2P1Q5T6R2 138 aa14.26□□□□□ -0.13
HMGXB3-201ENST00000502717 LHX2P50458 406 aa14.26□□□□□ -0.13
HMGXB3-201ENST00000502717 TTC32Q5I0X7 151 aa14.26□□□□□ -0.13
HMGXB3-201ENST00000502717 LYPD6Q86Y78 171 aa14.26□□□□□ -0.13
HMGXB3-201ENST00000502717 FDCSPQ8NFU4 85 aa14.26□□□□□ -0.13
HMGXB3-201ENST00000502717 WDR82Q6UXN9 313 aa14.25□□□□□ -0.13
HMGXB3-201ENST00000502717 GGNQ86UU5 652 aa14.25□□□□□ -0.13
HMGXB3-201ENST00000502717 TMUB1Q9BVT8 246 aa14.25□□□□□ -0.13
HMGXB3-201ENST00000502717 FOXA2Q9Y261 457 aaPredicted RBP14.25□□□□□ -0.13
HMGXB3-201ENST00000502717 FOXI3A8MTJ6 420 aaPredicted RBP14.25□□□□□ -0.13
HMGXB3-201ENST00000502717 Q6P435 159 aa14.25□□□□□ -0.13
HMGXB3-201ENST00000502717 TRBV20OR9-2A0A075B6H5 130 aa14.25□□□□□ -0.13
HMGXB3-201ENST00000502717 hDV102S1A0JD36 115 aa14.25□□□□□ -0.13
HMGXB3-201ENST00000502717 SAA1P0DJI8 122 aaPredicted RBP14.25□□□□□ -0.13
HMGXB3-201ENST00000502717 OCIAD2Q56VL3 154 aa14.25□□□□□ -0.13
HMGXB3-201ENST00000502717 C20orf204Q6ZNR8 217 aa14.25□□□□□ -0.13
HMGXB3-201ENST00000502717 TEX45Q8NA69 505 aa14.25□□□□□ -0.13
HMGXB3-201ENST00000502717 NUP35Q8NFH5 326 aa14.25□□□□□ -0.13
HMGXB3-201ENST00000502717 WISP1O95388 367 aa14.25□□□□□ -0.13
HMGXB3-201ENST00000502717 ZNF788Q6ZQV5 615 aa14.25□□□□□ -0.13
HMGXB3-201ENST00000502717 OR5AN1Q8NGI8 311 aa14.25□□□□□ -0.13
HMGXB3-201ENST00000502717 VCX2Q9H322 139 aa14.25□□□□□ -0.13
HMGXB3-201ENST00000502717 CCL19Q99731 98 aa14.24□□□□□ -0.13
HMGXB3-201ENST00000502717 CST9LQ9H4G1 147 aa14.24□□□□□ -0.13
HMGXB3-201ENST00000502717 LRRK1Q38SD2 2015 aa14.24□□□□□ -0.13
HMGXB3-201ENST00000502717 CECR9P0C854 216 aa14.24□□□□□ -0.13
HMGXB3-201ENST00000502717 MRPL16Q9NX20 251 aaKnown RBP14.24□□□□□ -0.13
HMGXB3-201ENST00000502717 IGKV1D-33P01593 117 aa14.24□□□□□ -0.13
HMGXB3-201ENST00000502717 IGKV1-33P01594 117 aa14.24□□□□□ -0.13
HMGXB3-201ENST00000502717 GFRA1P56159 465 aa14.24□□□□□ -0.13
HMGXB3-201ENST00000502717 COX6CP09669 75 aa14.24□□□□□ -0.13
HMGXB3-201ENST00000502717 FOXC2Q99958 501 aa14.24□□□□□ -0.13
HMGXB3-201ENST00000502717 A0A0G2JLM5 398 aa14.23□□□□□ -0.13
HMGXB3-201ENST00000502717 PSPNO60542 156 aa14.23□□□□□ -0.13
HMGXB3-201ENST00000502717 CELA3BP08861 270 aa14.23□□□□□ -0.13
HMGXB3-201ENST00000502717 ATP1A1-AS1Q5TC04 95 aa14.23□□□□□ -0.13
HMGXB3-201ENST00000502717 ANAPC1Q9H1A4 1944 aa14.23□□□□□ -0.13
HMGXB3-201ENST00000502717 MUC21A0A0G2JKD1 596 aa14.23□□□□□ -0.13
HMGXB3-201ENST00000502717 MUC21A0A140T8X8 626 aa14.23□□□□□ -0.13
HMGXB3-201ENST00000502717 CACNG7P62955 275 aa14.23□□□□□ -0.13
HMGXB3-201ENST00000502717 MUC21Q5SSG8 566 aa14.23□□□□□ -0.13
HMGXB3-201ENST00000502717 SAMD5Q5TGI4 173 aa14.23□□□□□ -0.13
HMGXB3-201ENST00000502717 C1orf162Q8NEQ5 155 aaPredicted RBP14.23□□□□□ -0.13
HMGXB3-201ENST00000502717 DYNLRB2Q8TF09 96 aa14.23□□□□□ -0.13
HMGXB3-201ENST00000502717 NHP2Q9NX24 153 aaKnown RBP14.23□□□□□ -0.13
HMGXB3-201ENST00000502717 DOCK11Q5JSL3 2073 aa14.23□□□□□ -0.13
HMGXB3-201ENST00000502717 TTC28Q96AY4 2481 aa14.23□□□□□ -0.13
HMGXB3-201ENST00000502717 A0A087X0K7 114 aa14.23□□□□□ -0.13
HMGXB3-201ENST00000502717 GLRXP35754 106 aa14.22□□□□□ -0.13
HMGXB3-201ENST00000502717 J3KRW8 73 aa14.22□□□□□ -0.13
HMGXB3-201ENST00000502717 SLC25A48Q6ZT89 311 aaKnown RBP14.22□□□□□ -0.13
HMGXB3-201ENST00000502717 IGLV3-1P01715 115 aa14.22□□□□□ -0.13
HMGXB3-201ENST00000502717 SPACA3Q8IXA5 215 aa14.22□□□□□ -0.13
HMGXB3-201ENST00000502717 TRAV5A0A0B4J249 113 aa14.22□□□□□ -0.13
HMGXB3-201ENST00000502717 C18orf32Q8TCD1 76 aa14.22□□□□□ -0.13
HMGXB3-201ENST00000502717 MRPL20Q9BYC9 149 aaKnown RBP14.22□□□□□ -0.13
HMGXB3-201ENST00000502717 RABAC1Q9UI14 185 aa14.22□□□□□ -0.13
HMGXB3-201ENST00000502717 HELZP42694 1942 aaKnown RBP14.21□□□□□ -0.13
HMGXB3-201ENST00000502717 LINC00473A8K010 186 aa14.21□□□□□ -0.13
HMGXB3-201ENST00000502717 Q5PR19 223 aa14.21□□□□□ -0.13
HMGXB3-201ENST00000502717 ZNF256Q9Y2P7 627 aaPredicted RBP14.21□□□□□ -0.13
HMGXB3-201ENST00000502717 PLXNB3Q9ULL4 1909 aa14.21□□□□□ -0.13
HMGXB3-201ENST00000502717 COL4A6Q14031 1691 aa14.21□□□□□ -0.13
HMGXB3-201ENST00000502717 ESPL1Q14674 2120 aa14.21□□□□□ -0.13
HMGXB3-201ENST00000502717 ESDP10768 282 aa14.21□□□□□ -0.13
HMGXB3-201ENST00000502717 ERVK11-1P61568 191 aa14.21□□□□□ -0.13
HMGXB3-201ENST00000502717 DENND4AQ7Z401 1863 aa14.21□□□□□ -0.13
HMGXB3-201ENST00000502717 FNDC10F2Z333 226 aa14.21□□□□□ -0.13
HMGXB3-201ENST00000502717 ZNF418Q8TF45 676 aaPredicted RBP14.21□□□□□ -0.13
HMGXB3-201ENST00000502717 IFI27L1Q96BM0 104 aa14.21□□□□□ -0.13
HMGXB3-201ENST00000502717 IGHV1-2P23083 117 aa14.21□□□□□ -0.14
HMGXB3-201ENST00000502717 FRMPD3Q5JV73 1810 aa14.2□□□□□ -0.14
HMGXB3-201ENST00000502717 RAB9AP51151 201 aa14.2□□□□□ -0.14
HMGXB3-201ENST00000502717 RPL15P61313 204 aaKnown RBP14.2□□□□□ -0.14
HMGXB3-201ENST00000502717 IGKV1-39P01597 117 aa14.2□□□□□ -0.14
HMGXB3-201ENST00000502717 IGKV1D-39P04432 117 aa14.2□□□□□ -0.14
HMGXB3-201ENST00000502717 SMAGPQ0VAQ4 97 aa14.2□□□□□ -0.14
HMGXB3-201ENST00000502717 HAPLN4Q86UW8 402 aa14.2□□□□□ -0.14
HMGXB3-201ENST00000502717 FER1L6-AS1Q8NA97 138 aa14.2□□□□□ -0.14
HMGXB3-201ENST00000502717 EP400Q96L91 3159 aa14.2□□□□□ -0.14
HMGXB3-201ENST00000502717 SMAD7O15105 426 aaKnown RBP14.2□□□□□ -0.14
HMGXB3-201ENST00000502717 ZFP36L1Q07352 338 aaKnown RBP14.2□□□□□ -0.14
HMGXB3-201ENST00000502717 TMEM190Q8WZ59 177 aa14.2□□□□□ -0.14
HMGXB3-201ENST00000502717 MEF2CQ06413 473 aaPredicted RBP14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms