RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 CCL25O15444 150 aa0.2□□□□□ -2.38
SMC4-227ENST00000497984 PROSCO94903 275 aa0.2□□□□□ -2.38
SMC4-227ENST00000497984 OR4E1P0C645 316 aa0.2□□□□□ -2.38
SMC4-227ENST00000497984 EFNA4P52798 201 aa0.2□□□□□ -2.38
SMC4-227ENST00000497984 SRSF6Q13247 344 aaKnown RBP0.2□□□□□ -2.38
SMC4-227ENST00000497984 BRMS1LQ5PSV4 323 aa0.2□□□□□ -2.38
SMC4-227ENST00000497984 CCDC122Q5T0U0 273 aa0.2□□□□□ -2.38
SMC4-227ENST00000497984 CLECL1Q8IZS7 167 aa0.2□□□□□ -2.38
SMC4-227ENST00000497984 WFDC5Q8TCV5 224 aa0.2□□□□□ -2.38
SMC4-227ENST00000497984 ADAT3Q96EY9 351 aaPredicted RBP0.2□□□□□ -2.38
SMC4-227ENST00000497984 C8orf76Q96K31 380 aa0.2□□□□□ -2.38
SMC4-227ENST00000497984 VPS29Q9UBQ0 182 aa0.2□□□□□ -2.38
SMC4-227ENST00000497984 SLC35A3Q9Y2D2 325 aa0.2□□□□□ -2.38
SMC4-227ENST00000497984 CLDN24A6NM45 220 aa0.19□□□□□ -2.38
SMC4-227ENST00000497984 PIRO00625 290 aa0.19□□□□□ -2.38
SMC4-227ENST00000497984 CNIH1O95406 144 aa0.19□□□□□ -2.38
SMC4-227ENST00000497984 TTRP02766 147 aa0.19□□□□□ -2.38
SMC4-227ENST00000497984 SERPINA6P08185 405 aa0.19□□□□□ -2.38
SMC4-227ENST00000497984 S100A4P26447 101 aaKnown RBP0.19□□□□□ -2.38
SMC4-227ENST00000497984 ESRGQ1W209 222 aa0.19□□□□□ -2.38
SMC4-227ENST00000497984 SPATA8Q6RVD6 105 aa0.19□□□□□ -2.38
SMC4-227ENST00000497984 TRAPPC6BQ86SZ2 158 aa0.19□□□□□ -2.38
SMC4-227ENST00000497984 C12orf45Q8N5I9 185 aaPredicted RBP0.19□□□□□ -2.38
SMC4-227ENST00000497984 CLDN22Q8N7P3 220 aa0.19□□□□□ -2.38
SMC4-227ENST00000497984 OR8D4Q8NGM9 314 aa0.19□□□□□ -2.38
SMC4-227ENST00000497984 C10orf95Q9H7T3 257 aa0.19□□□□□ -2.38
SMC4-227ENST00000497984 CYSLTR1Q9Y271 337 aa0.19□□□□□ -2.38
SMC4-227ENST00000497984 TNRC6BQ9UPQ9 1833 aaKnown RBP0.19□□□□□ -2.38
SMC4-227ENST00000497984 SSPOA2VEC9 5147 aa0.19□□□□□ -2.38
SMC4-227ENST00000497984 A0A1W2PPM0 123 aa0.18□□□□□ -2.38
SMC4-227ENST00000497984 ZNF682O95780 498 aa0.18□□□□□ -2.38
SMC4-227ENST00000497984 DNAL4O96015 105 aa0.18□□□□□ -2.38
SMC4-227ENST00000497984 PRH1P02810 166 aa0.18□□□□□ -2.38
SMC4-227ENST00000497984 RBP1P09455 135 aa0.18□□□□□ -2.38
SMC4-227ENST00000497984 YPEL3P61236 119 aaPredicted RBP0.18□□□□□ -2.38
SMC4-227ENST00000497984 PSG9Q00887 426 aa0.18□□□□□ -2.38
SMC4-227ENST00000497984 TSNQ15631 228 aaKnown RBP0.18□□□□□ -2.38
SMC4-227ENST00000497984 IMPG1Q17R60 797 aa0.18□□□□□ -2.38
SMC4-227ENST00000497984 C12orf74Q32Q52 190 aa0.18□□□□□ -2.38
SMC4-227ENST00000497984 Q8IYB0 196 aa0.18□□□□□ -2.38
SMC4-227ENST00000497984 LINC00301Q8NCQ3 95 aa0.18□□□□□ -2.38
SMC4-227ENST00000497984 PATE1Q8WXA2 126 aa0.18□□□□□ -2.38
SMC4-227ENST00000497984 DCUN1D1Q96GG9 259 aa0.18□□□□□ -2.38
SMC4-227ENST00000497984 NHP2Q9NX24 153 aaKnown RBP0.18□□□□□ -2.38
SMC4-227ENST00000497984 UTP11Q9Y3A2 253 aaKnown RBP0.18□□□□□ -2.38
SMC4-227ENST00000497984 CHCHD2Q9Y6H1 151 aaPredicted RBP0.18□□□□□ -2.38
SMC4-227ENST00000497984 LAMA4Q16363 1823 aa0.17□□□□□ -2.38
SMC4-227ENST00000497984 SPTBN4Q9H254 2564 aa0.17□□□□□ -2.38
SMC4-227ENST00000497984 APCP25054 2843 aa0.17□□□□□ -2.38
SMC4-227ENST00000497984 A0A087WUJ7 227 aa0.17□□□□□ -2.38
SMC4-227ENST00000497984 A0A087X0T9 212 aa0.17□□□□□ -2.38
SMC4-227ENST00000497984 TRBV6-4A0A1B0GX49 114 aa0.17□□□□□ -2.38
SMC4-227ENST00000497984 C7orf71A4D174 169 aa0.17□□□□□ -2.38
SMC4-227ENST00000497984 C1orf196B1AJZ1 125 aa0.17□□□□□ -2.38
SMC4-227ENST00000497984 M0R036 132 aa0.17□□□□□ -2.38
SMC4-227ENST00000497984 CCL16O15467 120 aa0.17□□□□□ -2.38
SMC4-227ENST00000497984 CASP1P29466 404 aa0.17□□□□□ -2.38
SMC4-227ENST00000497984 LCA10Q71F78 164 aa0.17□□□□□ -2.38
SMC4-227ENST00000497984 KRT222Q8N1A0 295 aa0.17□□□□□ -2.38
SMC4-227ENST00000497984 C4orf3Q8WVX3 66 aa0.17□□□□□ -2.38
SMC4-227ENST00000497984 HIST1H2BLQ99880 126 aa0.17□□□□□ -2.38
SMC4-227ENST00000497984 CCDC90BQ9GZT6 254 aa0.17□□□□□ -2.38
SMC4-227ENST00000497984 C6orf62Q9GZU0 229 aaPredicted RBP0.17□□□□□ -2.38
SMC4-227ENST00000497984 RNASE7Q9H1E1 156 aaKnown RBP0.17□□□□□ -2.38
SMC4-227ENST00000497984 C14orf105Q9NVL8 296 aa0.17□□□□□ -2.38
SMC4-227ENST00000497984 MYO3BQ8WXR4 1341 aa0.16□□□□□ -2.38
SMC4-227ENST00000497984 RALGAPA2Q2PPJ7 1873 aa0.16□□□□□ -2.38
SMC4-227ENST00000497984 MED1Q15648 1581 aaPredicted RBP0.16□□□□□ -2.38
SMC4-227ENST00000497984 hADV38S2A0JD32 116 aa0.16□□□□□ -2.38
SMC4-227ENST00000497984 KPNA3O00505 521 aaPredicted RBP0.16□□□□□ -2.38
SMC4-227ENST00000497984 KLF7O75840 302 aaPredicted RBP0.16□□□□□ -2.38
SMC4-227ENST00000497984 LYPLA2O95372 231 aa0.16□□□□□ -2.38
SMC4-227ENST00000497984 SMIM17P0DL12 118 aa0.16□□□□□ -2.38
SMC4-227ENST00000497984 SRIP30626 198 aa0.16□□□□□ -2.38
SMC4-227ENST00000497984 DEFA3P59666 94 aa0.16□□□□□ -2.38
SMC4-227ENST00000497984 IAH1Q2TAA2 248 aaPredicted RBP0.16□□□□□ -2.38
SMC4-227ENST00000497984 LINC00322Q6ZN03 302 aaPredicted RBP0.16□□□□□ -2.38
SMC4-227ENST00000497984 GKN2Q86XP6 184 aa0.16□□□□□ -2.38
SMC4-227ENST00000497984 GDPD1Q8N9F7 314 aa0.16□□□□□ -2.38
SMC4-227ENST00000497984 TEX47Q8TBZ9 253 aa0.16□□□□□ -2.38
SMC4-227ENST00000497984 TLNRD1Q9H1K6 362 aa0.16□□□□□ -2.38
SMC4-227ENST00000497984 BCL2L10Q9HD36 194 aa0.16□□□□□ -2.38
SMC4-227ENST00000497984 C14orf132Q9NPU4 83 aa0.16□□□□□ -2.38
SMC4-227ENST00000497984 E9PCH4 1651 aa0.15□□□□□ -2.39
SMC4-227ENST00000497984 hCG_1818297A0A087WSY0 165 aa0.15□□□□□ -2.39
SMC4-227ENST00000497984 A8MT66 165 aa0.15□□□□□ -2.39
SMC4-227ENST00000497984 GADD45GO95257 159 aa0.15□□□□□ -2.39
SMC4-227ENST00000497984 SERPINE1P05121 402 aa0.15□□□□□ -2.39
SMC4-227ENST00000497984 RANP62826 216 aaKnown RBP0.15□□□□□ -2.39
SMC4-227ENST00000497984 DYNLT1P63172 113 aa0.15□□□□□ -2.39
SMC4-227ENST00000497984 FAM74A1Q5RGS3 127 aa0.15□□□□□ -2.39
SMC4-227ENST00000497984 OR2T10Q8NGZ9 312 aa0.15□□□□□ -2.39
SMC4-227ENST00000497984 SLC25A40Q8TBP6 338 aa0.15□□□□□ -2.39
SMC4-227ENST00000497984 CT55Q8WUE5 264 aa0.15□□□□□ -2.39
SMC4-227ENST00000497984 ITFG2Q969R8 447 aa0.15□□□□□ -2.39
SMC4-227ENST00000497984 SLAMF6Q96DU3 332 aa0.15□□□□□ -2.39
SMC4-227ENST00000497984 C2orf50Q96LR7 162 aa0.15□□□□□ -2.39
SMC4-227ENST00000497984 CCDC42Q96M95 316 aa0.15□□□□□ -2.39
SMC4-227ENST00000497984 SMR3AQ99954 134 aa0.15□□□□□ -2.39
SMC4-227ENST00000497984 TMEM133Q9H2Q1 129 aa0.15□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 102.5 ms