RNA–Protein interactions for RNA: ENST00000495554.1

CHTOP-206, Transcript of chromatin target of PRMT1, humanhuman

TSL 2

Gene CHTOP, Length 2,553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-206ENST00000495554 LYNX1G3V0Z9 82 aa11.93□□□□□ -0.5
CHTOP-206ENST00000495554 LYNX1P0DP58 116 aa11.93□□□□□ -0.5
CHTOP-206ENST00000495554 LGALS7P47929 136 aa11.93□□□□□ -0.5
CHTOP-206ENST00000495554 ACTL10Q5JWF8 245 aa11.93□□□□□ -0.5
CHTOP-206ENST00000495554 TMEM183AQ8IXX5 376 aa11.93□□□□□ -0.5
CHTOP-206ENST00000495554 VPS25Q9BRG1 176 aa11.93□□□□□ -0.5
CHTOP-206ENST00000495554 LY96Q9Y6Y9 160 aa11.93□□□□□ -0.5
CHTOP-206ENST00000495554 TPRP12270 2363 aaKnown RBP11.93□□□□□ -0.5
CHTOP-206ENST00000495554 CGB1A6NKQ9 187 aa11.93□□□□□ -0.5
CHTOP-206ENST00000495554 FABP4P15090 132 aa11.93□□□□□ -0.5
CHTOP-206ENST00000495554 COL8A2P25067 703 aa11.93□□□□□ -0.5
CHTOP-206ENST00000495554 MUC15Q8N387 334 aa11.93□□□□□ -0.5
CHTOP-206ENST00000495554 STXBP6Q8NFX7 210 aa11.93□□□□□ -0.5
CHTOP-206ENST00000495554 OR2D3Q8NGH3 330 aa11.93□□□□□ -0.5
CHTOP-206ENST00000495554 ACY3Q96HD9 319 aa11.93□□□□□ -0.5
CHTOP-206ENST00000495554 DCHS2Q6V1P9 2916 aa11.93□□□□□ -0.5
CHTOP-206ENST00000495554 OR7C2O60412 319 aa11.92□□□□□ -0.5
CHTOP-206ENST00000495554 FSTL3O95633 263 aa11.92□□□□□ -0.5
CHTOP-206ENST00000495554 PPOXP50336 477 aa11.92□□□□□ -0.5
CHTOP-206ENST00000495554 COA6Q5JTJ3 125 aaKnown RBP11.92□□□□□ -0.5
CHTOP-206ENST00000495554 TEX38Q6PEX7 206 aa11.92□□□□□ -0.5
CHTOP-206ENST00000495554 OR2T6Q8NHC8 308 aa11.92□□□□□ -0.5
CHTOP-206ENST00000495554 SGMS2Q8NHU3 365 aa11.92□□□□□ -0.5
CHTOP-206ENST00000495554 C10orf55Q5SWW7 151 aa11.92□□□□□ -0.5
CHTOP-206ENST00000495554 OR10G8Q8NGN5 311 aa11.92□□□□□ -0.5
CHTOP-206ENST00000495554 TMEM37Q8WXS4 190 aa11.92□□□□□ -0.5
CHTOP-206ENST00000495554 ZNF503Q96F45 646 aa11.92□□□□□ -0.5
CHTOP-206ENST00000495554 SLC25A33Q9BSK2 321 aa11.92□□□□□ -0.5
CHTOP-206ENST00000495554 MRPL32Q9BYC8 188 aaKnown RBP11.92□□□□□ -0.5
CHTOP-206ENST00000495554 C8orf88P0DMB2 117 aa11.91□□□□□ -0.5
CHTOP-206ENST00000495554 ZNF672Q499Z4 452 aaPredicted RBP11.91□□□□□ -0.5
CHTOP-206ENST00000495554 OR1P1Q8NH06 330 aa11.91□□□□□ -0.5
CHTOP-206ENST00000495554 HIST1H2BLQ99880 126 aa11.91□□□□□ -0.5
CHTOP-206ENST00000495554 DNAJC4Q9NNZ3 241 aa11.91□□□□□ -0.5
CHTOP-206ENST00000495554 OR5R1Q8NH85 324 aa11.91□□□□□ -0.5
CHTOP-206ENST00000495554 IGHV2-26A0A0B4J1V2 119 aa11.9□□□□□ -0.5
CHTOP-206ENST00000495554 ENSAO43768 121 aaKnown RBP11.9□□□□□ -0.5
CHTOP-206ENST00000495554 RITA1Q96K30 269 aa11.9□□□□□ -0.5
CHTOP-206ENST00000495554 FNDC4Q9H6D8 234 aaPredicted RBP11.9□□□□□ -0.5
CHTOP-206ENST00000495554 MALRD1Q5VYJ5 2156 aa11.9□□□□□ -0.5
CHTOP-206ENST00000495554 PSMB11A5LHX3 300 aa11.9□□□□□ -0.5
CHTOP-206ENST00000495554 IGLV1-47P01700 117 aa11.9□□□□□ -0.5
CHTOP-206ENST00000495554 LY6DQ14210 128 aa11.9□□□□□ -0.5
CHTOP-206ENST00000495554 MRPL41Q8IXM3 137 aaKnown RBP11.9□□□□□ -0.5
CHTOP-206ENST00000495554 TEX45Q8NA69 505 aa11.9□□□□□ -0.5
CHTOP-206ENST00000495554 EAF1Q96JC9 268 aaPredicted RBP11.9□□□□□ -0.5
CHTOP-206ENST00000495554 A0A1W2PRE2 83 aa11.89□□□□□ -0.51
CHTOP-206ENST00000495554 HELTA6NFD8 242 aa11.89□□□□□ -0.51
CHTOP-206ENST00000495554 K7EN84 100 aa11.89□□□□□ -0.51
CHTOP-206ENST00000495554 COMPP49747 757 aaPredicted RBP11.89□□□□□ -0.51
CHTOP-206ENST00000495554 PDLIM4P50479 330 aa11.89□□□□□ -0.51
CHTOP-206ENST00000495554 ZNF841Q6ZN19 808 aa11.89□□□□□ -0.51
CHTOP-206ENST00000495554 TPSG1Q9NRR2 321 aa11.89□□□□□ -0.51
CHTOP-206ENST00000495554 A0A1W2PPI3 338 aa11.89□□□□□ -0.51
CHTOP-206ENST00000495554 OR10J4P0C629 311 aa11.89□□□□□ -0.51
CHTOP-206ENST00000495554 CRYBB3P26998 211 aa11.89□□□□□ -0.51
CHTOP-206ENST00000495554 RPL15P61313 204 aaKnown RBP11.89□□□□□ -0.51
CHTOP-206ENST00000495554 MRGPRG-AS1Q2M3A8 158 aa11.89□□□□□ -0.51
CHTOP-206ENST00000495554 NPIPB3Q92617 1050 aa11.89□□□□□ -0.51
CHTOP-206ENST00000495554 IGHV3-72A0A0B4J1Y9 119 aa11.88□□□□□ -0.51
CHTOP-206ENST00000495554 TCRBV4S1A1TA0A5B7 111 aa11.88□□□□□ -0.51
CHTOP-206ENST00000495554 RBP4P02753 201 aa11.88□□□□□ -0.51
CHTOP-206ENST00000495554 GNG4P50150 75 aa11.88□□□□□ -0.51
CHTOP-206ENST00000495554 SELENOTP62341 195 aa11.88□□□□□ -0.51
CHTOP-206ENST00000495554 MMD2Q8IY49 270 aa11.88□□□□□ -0.51
CHTOP-206ENST00000495554 TRAPPC1Q9Y5R8 145 aa11.88□□□□□ -0.51
CHTOP-206ENST00000495554 ITPR1Q14643 2758 aa11.88□□□□□ -0.51
CHTOP-206ENST00000495554 TRAV9-1A0A075B6T8 112 aa11.88□□□□□ -0.51
CHTOP-206ENST00000495554 THAP8Q8NA92 274 aa11.88□□□□□ -0.51
CHTOP-206ENST00000495554 OR1L4Q8NGR5 311 aa11.88□□□□□ -0.51
CHTOP-206ENST00000495554 FAM167A-AS1Q96KT0 104 aa11.88□□□□□ -0.51
CHTOP-206ENST00000495554 CLEC7AQ9BXN2 247 aa11.88□□□□□ -0.51
CHTOP-206ENST00000495554 PRORYQ9H606 182 aa11.88□□□□□ -0.51
CHTOP-206ENST00000495554 INSIG2Q9Y5U4 225 aa11.88□□□□□ -0.51
CHTOP-206ENST00000495554 HRNRQ86YZ3 2850 aaPredicted RBP11.88□□□□□ -0.51
CHTOP-206ENST00000495554 GGTLC3B5MD39 225 aa11.87□□□□□ -0.51
CHTOP-206ENST00000495554 BUB1B-PAK6H3BSN5 160 aa11.87□□□□□ -0.51
CHTOP-206ENST00000495554 COX7A2P2O60397 106 aa11.87□□□□□ -0.51
CHTOP-206ENST00000495554 PRSS8Q16651 343 aa11.87□□□□□ -0.51
CHTOP-206ENST00000495554 SLC25A2Q9BXI2 301 aa11.87□□□□□ -0.51
CHTOP-206ENST00000495554 LPAR2Q9HBW0 351 aa11.87□□□□□ -0.51
CHTOP-206ENST00000495554 IL36BQ9NZH7 164 aa11.87□□□□□ -0.51
CHTOP-206ENST00000495554 PPIAL4CA0A0B4J2A2 164 aa11.87□□□□□ -0.51
CHTOP-206ENST00000495554 IGLC7A0M8Q6 106 aa11.87□□□□□ -0.51
CHTOP-206ENST00000495554 PPIAL4GP0DN37 164 aa11.87□□□□□ -0.51
CHTOP-206ENST00000495554 SUMO1P63165 101 aaKnown RBP11.87□□□□□ -0.51
CHTOP-206ENST00000495554 SSBP2P81877 361 aaPredicted RBP11.87□□□□□ -0.51
CHTOP-206ENST00000495554 CENPWQ5EE01 88 aa11.87□□□□□ -0.51
CHTOP-206ENST00000495554 HIVEP3Q5T1R4 2406 aa11.87□□□□□ -0.51
CHTOP-206ENST00000495554 IGKV1D-37A0A075B6S9 117 aa11.86□□□□□ -0.51
CHTOP-206ENST00000495554 IGHV1-3A0A0C4DH29 117 aa11.86□□□□□ -0.51
CHTOP-206ENST00000495554 AMBPP02760 352 aa11.86□□□□□ -0.51
CHTOP-206ENST00000495554 CNN1P51911 297 aaKnown RBP11.86□□□□□ -0.51
CHTOP-206ENST00000495554 ZNF90Q03938 601 aa11.86□□□□□ -0.51
CHTOP-206ENST00000495554 C10orf113Q5VZT2 155 aa11.86□□□□□ -0.51
CHTOP-206ENST00000495554 PVRIGQ6DKI7 326 aa11.86□□□□□ -0.51
CHTOP-206ENST00000495554 ZNF664Q8N3J9 261 aa11.86□□□□□ -0.51
CHTOP-206ENST00000495554 SPTBN1Q01082 2364 aaKnown RBP11.86□□□□□ -0.51
CHTOP-206ENST00000495554 REG1AP05451 166 aa11.86□□□□□ -0.51
CHTOP-206ENST00000495554 CRYGBP07316 175 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms