RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 LOC389332A0A1B0GUA5 103 aa10.96□□□□□ -0.65
GPC1-209ENST00000495100 JOSD1Q15040 202 aaPredicted RBP10.96□□□□□ -0.65
GPC1-209ENST00000495100 VMA21Q3ZAQ7 101 aa10.96□□□□□ -0.65
GPC1-209ENST00000495100 ELOVL5Q9NYP7 299 aa10.96□□□□□ -0.65
GPC1-209ENST00000495100 TBL2Q9Y4P3 447 aaKnown RBP10.96□□□□□ -0.65
GPC1-209ENST00000495100 NACAE9PAV3 2078 aa10.96□□□□□ -0.66
GPC1-209ENST00000495100 NPIPB11E5RHQ5 1161 aa10.96□□□□□ -0.66
GPC1-209ENST00000495100 IGHG3P01860 377 aa10.96□□□□□ -0.66
GPC1-209ENST00000495100 C8orf88P0DMB2 117 aa10.96□□□□□ -0.66
GPC1-209ENST00000495100 VDAC2P45880 294 aaPredicted RBP10.96□□□□□ -0.66
GPC1-209ENST00000495100 Q6ZVH6 145 aa10.96□□□□□ -0.66
GPC1-209ENST00000495100 PNKDQ8N490 385 aa10.96□□□□□ -0.66
GPC1-209ENST00000495100 RAB9BQ9NP90 201 aa10.96□□□□□ -0.66
GPC1-209ENST00000495100 C17orf100A8MU93 164 aa10.95□□□□□ -0.66
GPC1-209ENST00000495100 ISLRO14498 428 aa10.95□□□□□ -0.66
GPC1-209ENST00000495100 TMEM106BQ9NUM4 274 aa10.95□□□□□ -0.66
GPC1-209ENST00000495100 DSCAML1Q8TD84 2053 aa10.95□□□□□ -0.66
GPC1-209ENST00000495100 HINT1P49773 126 aaPredicted RBP10.95□□□□□ -0.66
GPC1-209ENST00000495100 SUB1P53999 127 aaKnown RBP eCLIP10.95□□□□□ -0.66
GPC1-209ENST00000495100 Q6ZN92 141 aa10.95□□□□□ -0.66
GPC1-209ENST00000495100 WFDC3Q8IUB2 231 aa10.95□□□□□ -0.66
GPC1-209ENST00000495100 MTORP42345 2549 aa10.95□□□□□ -0.66
GPC1-209ENST00000495100 GGTLC3B5MD39 225 aa10.95□□□□□ -0.66
GPC1-209ENST00000495100 UPK2O00526 184 aa10.95□□□□□ -0.66
GPC1-209ENST00000495100 SRP14P37108 136 aaKnown RBP10.95□□□□□ -0.66
GPC1-209ENST00000495100 EXOC3-AS1Q8N2X6 119 aa10.95□□□□□ -0.66
GPC1-209ENST00000495100 DEFB104AQ8WTQ1 72 aa10.95□□□□□ -0.66
GPC1-209ENST00000495100 LOXL4Q96JB6 756 aa10.95□□□□□ -0.66
GPC1-209ENST00000495100 M0R2Z0 102 aa10.94□□□□□ -0.66
GPC1-209ENST00000495100 CHEK1O14757 476 aa10.94□□□□□ -0.66
GPC1-209ENST00000495100 KLRD1Q13241 179 aa10.94□□□□□ -0.66
GPC1-209ENST00000495100 ADIPOQQ15848 244 aa10.94□□□□□ -0.66
GPC1-209ENST00000495100 GOLT1AQ6ZVE7 132 aa10.94□□□□□ -0.66
GPC1-209ENST00000495100 REC114Q7Z4M0 266 aa10.94□□□□□ -0.66
GPC1-209ENST00000495100 CLEC5AQ9NY25 188 aa10.94□□□□□ -0.66
GPC1-209ENST00000495100 MRPL36Q9P0J6 103 aaKnown RBP10.94□□□□□ -0.66
GPC1-209ENST00000495100 CCL21O00585 134 aa10.94□□□□□ -0.66
GPC1-209ENST00000495100 APCSP02743 223 aa10.94□□□□□ -0.66
GPC1-209ENST00000495100 MAJINQ3KP22 176 aa10.94□□□□□ -0.66
GPC1-209ENST00000495100 KDF1Q8NAX2 398 aaPredicted RBP10.94□□□□□ -0.66
GPC1-209ENST00000495100 TMEM167BQ9NRX6 74 aa10.94□□□□□ -0.66
GPC1-209ENST00000495100 RPUSD1Q9UJJ7 312 aaKnown RBP10.94□□□□□ -0.66
GPC1-209ENST00000495100 MPDU1O75352 247 aa10.93□□□□□ -0.66
GPC1-209ENST00000495100 TP73-AS1Q9UF72 201 aa10.93□□□□□ -0.66
GPC1-209ENST00000495100 NAV2Q8IVL1 2488 aa10.93□□□□□ -0.66
GPC1-209ENST00000495100 EPG5Q9HCE0 2579 aa10.93□□□□□ -0.66
GPC1-209ENST00000495100 COL8A1P27658 744 aa10.93□□□□□ -0.66
GPC1-209ENST00000495100 BPIFB3P59826 476 aa10.93□□□□□ -0.66
GPC1-209ENST00000495100 MBNL2Q5VZF2 373 aaKnown RBP10.93□□□□□ -0.66
GPC1-209ENST00000495100 RCHY1Q96PM5 261 aa10.93□□□□□ -0.66
GPC1-209ENST00000495100 SCNM1Q9BWG6 230 aa10.93□□□□□ -0.66
GPC1-209ENST00000495100 RPL27AP46776 148 aaKnown RBP10.93□□□□□ -0.66
GPC1-209ENST00000495100 WT1-ASQ06250 92 aa10.93□□□□□ -0.66
GPC1-209ENST00000495100 YPEL4Q96NS1 127 aa10.93□□□□□ -0.66
GPC1-209ENST00000495100 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.92□□□□□ -0.66
GPC1-209ENST00000495100 ZNF207O43670 478 aaKnown RBP10.92□□□□□ -0.66
GPC1-209ENST00000495100 TMEM177Q53S58 311 aa10.92□□□□□ -0.66
GPC1-209ENST00000495100 OR4C13Q8NGP0 309 aa10.92□□□□□ -0.66
GPC1-209ENST00000495100 RNF2Q99496 336 aa10.92□□□□□ -0.66
GPC1-209ENST00000495100 IL36BQ9NZH7 164 aa10.92□□□□□ -0.66
GPC1-209ENST00000495100 LINC00527Q9UJ94 153 aa10.92□□□□□ -0.66
GPC1-209ENST00000495100 ACTL10Q5JWF8 245 aa10.92□□□□□ -0.66
GPC1-209ENST00000495100 SSX8Q7RTT4 187 aa10.92□□□□□ -0.66
GPC1-209ENST00000495100 PRR7Q8TB68 274 aa10.92□□□□□ -0.66
GPC1-209ENST00000495100 ADTRPQ96IZ2 230 aa10.92□□□□□ -0.66
GPC1-209ENST00000495100 FNDC4Q9H6D8 234 aaPredicted RBP10.92□□□□□ -0.66
GPC1-209ENST00000495100 HIGD1CA8MV81 97 aa10.92□□□□□ -0.66
GPC1-209ENST00000495100 M0R143 59 aa10.92□□□□□ -0.66
GPC1-209ENST00000495100 GBGT1Q8N5D6 347 aa10.92□□□□□ -0.66
GPC1-209ENST00000495100 J3QW42 95 aa10.91□□□□□ -0.66
GPC1-209ENST00000495100 VENTXO95231 258 aa10.91□□□□□ -0.66
GPC1-209ENST00000495100 FCGR2BP31994 310 aaPredicted RBP10.91□□□□□ -0.66
GPC1-209ENST00000495100 KIR2DS2P43631 304 aa10.91□□□□□ -0.66
GPC1-209ENST00000495100 TMEM144Q7Z5S9 345 aa10.91□□□□□ -0.66
GPC1-209ENST00000495100 NOL4LQ96MY1 436 aaPredicted RBP10.91□□□□□ -0.66
GPC1-209ENST00000495100 IGHV1-69-2A0A0G2JMI3 117 aa10.91□□□□□ -0.66
GPC1-209ENST00000495100 CD3EP07766 207 aa10.91□□□□□ -0.66
GPC1-209ENST00000495100 RPL11P62913 178 aaKnown RBP10.91□□□□□ -0.66
GPC1-209ENST00000495100 CD69Q07108 199 aa10.91□□□□□ -0.66
GPC1-209ENST00000495100 C1orf162Q8NEQ5 155 aaPredicted RBP10.91□□□□□ -0.66
GPC1-209ENST00000495100 DLL1O00548 723 aa10.9□□□□□ -0.66
GPC1-209ENST00000495100 HNRNPA3P51991 378 aaKnown RBP10.9□□□□□ -0.66
GPC1-209ENST00000495100 PRCDQ00LT1 54 aa10.9□□□□□ -0.66
GPC1-209ENST00000495100 SPATA45Q537H7 98 aa10.9□□□□□ -0.66
GPC1-209ENST00000495100 ZNF788Q6ZQV5 615 aa10.9□□□□□ -0.66
GPC1-209ENST00000495100 Q6ZWC4 215 aa10.9□□□□□ -0.66
GPC1-209ENST00000495100 CIARTQ8N365 385 aaPredicted RBP10.9□□□□□ -0.66
GPC1-209ENST00000495100 NGBQ9NPG2 151 aa10.9□□□□□ -0.66
GPC1-209ENST00000495100 TMEM242Q9NWH2 141 aa10.9□□□□□ -0.66
GPC1-209ENST00000495100 FOXA2Q9Y261 457 aaPredicted RBP10.9□□□□□ -0.66
GPC1-209ENST00000495100 POLR3KQ9Y2Y1 108 aaPredicted RBP10.9□□□□□ -0.66
GPC1-209ENST00000495100 WASHC3Q9Y3C0 194 aa10.9□□□□□ -0.66
GPC1-209ENST00000495100 PPIAL4CA0A0B4J2A2 164 aa10.9□□□□□ -0.66
GPC1-209ENST00000495100 M0R3E3 92 aa10.9□□□□□ -0.66
GPC1-209ENST00000495100 IGLV1-44P01699 117 aa10.9□□□□□ -0.66
GPC1-209ENST00000495100 NBEAP1P0C6P0 100 aa10.9□□□□□ -0.66
GPC1-209ENST00000495100 PPIAL4GP0DN37 164 aa10.9□□□□□ -0.66
GPC1-209ENST00000495100 RNASE2P10153 161 aaKnown RBP10.9□□□□□ -0.66
GPC1-209ENST00000495100 BRS3P32247 399 aa10.9□□□□□ -0.66
GPC1-209ENST00000495100 NRN1Q9NPD7 142 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms