RNA–Protein interactions for RNA: ENST00000492887.5

FDPS-218, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-218ENST00000492887 OR2T8A6NH00 312 aa6.29□□□□□ -1.4
FDPS-218ENST00000492887 FAM223BA6NKX1 122 aa6.29□□□□□ -1.4
FDPS-218ENST00000492887 NUPL2O15504 423 aaKnown RBP6.29□□□□□ -1.4
FDPS-218ENST00000492887 SOX15O60248 233 aa6.29□□□□□ -1.4
FDPS-218ENST00000492887 IGHV3-11P01762 117 aa6.29□□□□□ -1.4
FDPS-218ENST00000492887 OR5G3P0C626 314 aa6.29□□□□□ -1.4
FDPS-218ENST00000492887 FAM157CP0CG43 387 aa6.29□□□□□ -1.4
FDPS-218ENST00000492887 M6PRP20645 277 aa6.29□□□□□ -1.4
FDPS-218ENST00000492887 GATA2P23769 480 aaPredicted RBP6.29□□□□□ -1.4
FDPS-218ENST00000492887 GPR183P32249 361 aa6.29□□□□□ -1.4
FDPS-218ENST00000492887 CRIP2P52943 208 aaPredicted RBP6.29□□□□□ -1.4
FDPS-218ENST00000492887 CLLU1Q5K131 121 aa6.29□□□□□ -1.4
FDPS-218ENST00000492887 PXDC1Q5TGL8 231 aa6.29□□□□□ -1.4
FDPS-218ENST00000492887 CLEC19AQ6UXS0 136 aa6.29□□□□□ -1.4
FDPS-218ENST00000492887 FAM223AQ8IWN6 122 aa6.29□□□□□ -1.4
FDPS-218ENST00000492887 THAP8Q8NA92 274 aa6.29□□□□□ -1.4
FDPS-218ENST00000492887 NECAP1Q8NC96 275 aa6.29□□□□□ -1.4
FDPS-218ENST00000492887 OR1L4Q8NGR5 311 aa6.29□□□□□ -1.4
FDPS-218ENST00000492887 OR1B1Q8NGR6 318 aa6.29□□□□□ -1.4
FDPS-218ENST00000492887 OR4X1Q8NH49 305 aa6.29□□□□□ -1.4
FDPS-218ENST00000492887 TRGV9Q99603 122 aa6.29□□□□□ -1.4
FDPS-218ENST00000492887 PBDC1Q9BVG4 233 aa6.29□□□□□ -1.4
FDPS-218ENST00000492887 ACTR3CQ9C0K3 210 aaPredicted RBP6.29□□□□□ -1.4
FDPS-218ENST00000492887 HRH4Q9H3N8 390 aa6.29□□□□□ -1.4
FDPS-218ENST00000492887 VSIRQ9H7M9 311 aa6.29□□□□□ -1.4
FDPS-218ENST00000492887 SLC39A9Q9NUM3 307 aa6.29□□□□□ -1.4
FDPS-218ENST00000492887 GAR1Q9NY12 217 aaKnown RBP6.29□□□□□ -1.4
FDPS-218ENST00000492887 DMRT1Q9Y5R6 373 aa6.29□□□□□ -1.4
FDPS-218ENST00000492887 CELSR1Q9NYQ6 3014 aa6.29□□□□□ -1.4
FDPS-218ENST00000492887 ACANP16112 2415 aa6.29□□□□□ -1.4
FDPS-218ENST00000492887 HIVEP2P31629 2446 aa6.29□□□□□ -1.4
FDPS-218ENST00000492887 TLN2Q9Y4G6 2542 aa6.29□□□□□ -1.4
FDPS-218ENST00000492887 TEX15Q9BXT5 2789 aa6.29□□□□□ -1.4
FDPS-218ENST00000492887 BAHCC1Q9P281 2608 aa6.29□□□□□ -1.4
FDPS-218ENST00000492887 SVEP1Q4LDE5 3571 aa6.28□□□□□ -1.4
FDPS-218ENST00000492887 ANK3Q12955 4377 aaKnown RBP6.28□□□□□ -1.4
FDPS-218ENST00000492887 A0A0G2JLM5 398 aa6.28□□□□□ -1.4
FDPS-218ENST00000492887 ANKRD34BA5PLL1 514 aa6.28□□□□□ -1.4
FDPS-218ENST00000492887 MAP1LC3B2A6NCE7 125 aa6.28□□□□□ -1.4
FDPS-218ENST00000492887 HMGB3O15347 200 aaKnown RBP6.28□□□□□ -1.4
FDPS-218ENST00000492887 YIF1AO95070 293 aa6.28□□□□□ -1.4
FDPS-218ENST00000492887 HBE1P02100 147 aa6.28□□□□□ -1.4
FDPS-218ENST00000492887 RNASE1P07998 156 aaKnown RBP6.28□□□□□ -1.4
FDPS-218ENST00000492887 NMBP08949 121 aa6.28□□□□□ -1.4
FDPS-218ENST00000492887 H2AFB1P0C5Y9 115 aa6.28□□□□□ -1.4
FDPS-218ENST00000492887 ORM2P19652 201 aa6.28□□□□□ -1.4
FDPS-218ENST00000492887 RPL29P47914 159 aaKnown RBP6.28□□□□□ -1.4
FDPS-218ENST00000492887 FGF8P55075 233 aaPredicted RBP6.28□□□□□ -1.4
FDPS-218ENST00000492887 HILS1P60008 231 aa6.28□□□□□ -1.4
FDPS-218ENST00000492887 SELENOTP62341 195 aa6.28□□□□□ -1.4
FDPS-218ENST00000492887 RHOBP62745 196 aa6.28□□□□□ -1.4
FDPS-218ENST00000492887 ZNF90Q03938 601 aa6.28□□□□□ -1.4
FDPS-218ENST00000492887 NDUFA5Q16718 116 aa6.28□□□□□ -1.4
FDPS-218ENST00000492887 PVRIGQ6DKI7 326 aa6.28□□□□□ -1.4
FDPS-218ENST00000492887 LCN15Q6UWW0 184 aa6.28□□□□□ -1.4
FDPS-218ENST00000492887 DPPA3Q6W0C5 159 aa6.28□□□□□ -1.4
FDPS-218ENST00000492887 LCNL1Q6ZST4 164 aa6.28□□□□□ -1.4
FDPS-218ENST00000492887 Q6ZSV7 163 aa6.28□□□□□ -1.4
FDPS-218ENST00000492887 COMMD7Q86VX2 200 aa6.28□□□□□ -1.4
FDPS-218ENST00000492887 TMEM116Q8NCL8 245 aa6.28□□□□□ -1.4
FDPS-218ENST00000492887 OR4X2Q8NGF9 303 aa6.28□□□□□ -1.4
FDPS-218ENST00000492887 VN1R17PQ8TDU5 208 aa6.28□□□□□ -1.4
FDPS-218ENST00000492887 SAT2Q96F10 170 aaPredicted RBP6.28□□□□□ -1.4
FDPS-218ENST00000492887 OR5B12Q96R08 314 aa6.28□□□□□ -1.4
FDPS-218ENST00000492887 PFDN5Q99471 154 aa6.28□□□□□ -1.4
FDPS-218ENST00000492887 MAP1LC3BQ9GZQ8 125 aa6.28□□□□□ -1.4
FDPS-218ENST00000492887 LSM4Q9Y4Z0 139 aaKnown RBP6.28□□□□□ -1.4
FDPS-218ENST00000492887 IGKV1OR2-108A0A075B7D4 117 aa6.27□□□□□ -1.41
FDPS-218ENST00000492887 TRBV7-1A0A0A6YYK4 115 aa6.27□□□□□ -1.41
FDPS-218ENST00000492887 IGHV3-35A0A0C4DH35 117 aa6.27□□□□□ -1.41
FDPS-218ENST00000492887 CTXND1A0A1B0GTU2 59 aa6.27□□□□□ -1.41
FDPS-218ENST00000492887 CLDN34H7C241 214 aa6.27□□□□□ -1.41
FDPS-218ENST00000492887 EIF3GO75821 320 aaKnown RBP eCLIP6.27□□□□□ -1.41
FDPS-218ENST00000492887 IGLC1P0CG04 106 aa6.27□□□□□ -1.41
FDPS-218ENST00000492887 ARL3P36405 182 aa6.27□□□□□ -1.41
FDPS-218ENST00000492887 FHITP49789 147 aa6.27□□□□□ -1.41
FDPS-218ENST00000492887 FAM78BQ5VT40 261 aa6.27□□□□□ -1.41
FDPS-218ENST00000492887 C10orf113Q5VZT2 155 aa6.27□□□□□ -1.41
FDPS-218ENST00000492887 TEX38Q6PEX7 206 aa6.27□□□□□ -1.41
FDPS-218ENST00000492887 Q8WTZ3 238 aa6.27□□□□□ -1.41
FDPS-218ENST00000492887 SFT2D1Q8WV19 159 aa6.27□□□□□ -1.41
FDPS-218ENST00000492887 USMG5Q96IX5 58 aa6.27□□□□□ -1.41
FDPS-218ENST00000492887 RNF2Q99496 336 aa6.27□□□□□ -1.41
FDPS-218ENST00000492887 TXN2Q99757 166 aa6.27□□□□□ -1.41
FDPS-218ENST00000492887 RPRMQ9NS64 109 aa6.27□□□□□ -1.41
FDPS-218ENST00000492887 SLC45A2Q9UMX9 530 aa6.27□□□□□ -1.41
FDPS-218ENST00000492887 IGKV1D-37A0A075B6S9 117 aa6.26□□□□□ -1.41
FDPS-218ENST00000492887 TRBV9A0A0B4J1U6 114 aa6.26□□□□□ -1.41
FDPS-218ENST00000492887 NUDT19A8MXV4 375 aa6.26□□□□□ -1.41
FDPS-218ENST00000492887 PPP5D1E7EU14 171 aa6.26□□□□□ -1.41
FDPS-218ENST00000492887 TGOLN2O43493 480 aa6.26□□□□□ -1.41
FDPS-218ENST00000492887 OR7C2O60412 319 aa6.26□□□□□ -1.41
FDPS-218ENST00000492887 HYPMO75409 117 aa6.26□□□□□ -1.41
FDPS-218ENST00000492887 CRLF1O75462 422 aa6.26□□□□□ -1.41
FDPS-218ENST00000492887 TOMM40O96008 361 aa6.26□□□□□ -1.41
FDPS-218ENST00000492887 IFNA1P01562 189 aa6.26□□□□□ -1.41
FDPS-218ENST00000492887 IL4P05112 153 aa6.26□□□□□ -1.41
FDPS-218ENST00000492887 RD3LP0DJH9 198 aa6.26□□□□□ -1.41
FDPS-218ENST00000492887 PSG1P11464 419 aa6.26□□□□□ -1.41
FDPS-218ENST00000492887 MDKP21741 143 aaPredicted RBP6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms