RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 LILRB2Q8N423 598 aa7.18□□□□□ -1.26
TMEM39A-210ENST00000490099 OR4X1Q8NH49 305 aa7.18□□□□□ -1.26
TMEM39A-210ENST00000490099 LHFPL5Q8TAF8 219 aa7.18□□□□□ -1.26
TMEM39A-210ENST00000490099 FNDC4Q9H6D8 234 aaPredicted RBP7.18□□□□□ -1.26
TMEM39A-210ENST00000490099 NAA60Q9H7X0 242 aa7.18□□□□□ -1.26
TMEM39A-210ENST00000490099 MAP6D1Q9H9H5 199 aa7.18□□□□□ -1.26
TMEM39A-210ENST00000490099 MRPL36Q9P0J6 103 aaKnown RBP7.18□□□□□ -1.26
TMEM39A-210ENST00000490099 TRAV2A0A0B4J234 112 aa7.17□□□□□ -1.26
TMEM39A-210ENST00000490099 CRYM-AS1A6NIL9 109 aa7.17□□□□□ -1.26
TMEM39A-210ENST00000490099 SPRY2O43597 315 aa7.17□□□□□ -1.26
TMEM39A-210ENST00000490099 GNG7O60262 68 aa7.17□□□□□ -1.26
TMEM39A-210ENST00000490099 IFNA17P01571 189 aa7.17□□□□□ -1.26
TMEM39A-210ENST00000490099 IGKV1-17P01599 117 aa7.17□□□□□ -1.26
TMEM39A-210ENST00000490099 IL5P05113 134 aa7.17□□□□□ -1.26
TMEM39A-210ENST00000490099 OR5AC1P0C628 307 aa7.17□□□□□ -1.26
TMEM39A-210ENST00000490099 AKR1C4P17516 323 aa7.17□□□□□ -1.26
TMEM39A-210ENST00000490099 BMI1P35226 326 aa7.17□□□□□ -1.26
TMEM39A-210ENST00000490099 AKR1C2P52895 323 aa7.17□□□□□ -1.26
TMEM39A-210ENST00000490099 SUB1P53999 127 aaKnown RBP eCLIP7.17□□□□□ -1.26
TMEM39A-210ENST00000490099 SPCS3P61009 180 aa7.17□□□□□ -1.26
TMEM39A-210ENST00000490099 DHODHQ02127 395 aa7.17□□□□□ -1.26
TMEM39A-210ENST00000490099 MLANAQ16655 118 aa7.17□□□□□ -1.26
TMEM39A-210ENST00000490099 C4orf46Q504U0 113 aa7.17□□□□□ -1.26
TMEM39A-210ENST00000490099 SPINK9Q5DT21 86 aa7.17□□□□□ -1.26
TMEM39A-210ENST00000490099 ZNF600Q6ZNG1 722 aa7.17□□□□□ -1.26
TMEM39A-210ENST00000490099 SELENOHQ8IZQ5 122 aaKnown RBP7.17□□□□□ -1.26
TMEM39A-210ENST00000490099 RBPMSQ93062 196 aaKnown RBP7.17□□□□□ -1.26
TMEM39A-210ENST00000490099 RNF183Q96D59 192 aa7.17□□□□□ -1.26
TMEM39A-210ENST00000490099 RRNAD1Q96FB5 475 aaKnown RBP7.17□□□□□ -1.26
TMEM39A-210ENST00000490099 GALNT14Q96FL9 552 aa7.17□□□□□ -1.26
TMEM39A-210ENST00000490099 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.17□□□□□ -1.26
TMEM39A-210ENST00000490099 KCNIP3Q9Y2W7 256 aa7.17□□□□□ -1.26
TMEM39A-210ENST00000490099 U3KQE9 123 aa7.17□□□□□ -1.26
TMEM39A-210ENST00000490099 IGHV3-49A0A0A0MS15 119 aa7.16□□□□□ -1.26
TMEM39A-210ENST00000490099 TMEM238LA0A1B0GVL6 79 aa7.16□□□□□ -1.26
TMEM39A-210ENST00000490099 SNRPGP15A8MWD9 76 aa7.16□□□□□ -1.26
TMEM39A-210ENST00000490099 CLN5O75503 358 aa7.16□□□□□ -1.26
TMEM39A-210ENST00000490099 YIF1AO95070 293 aa7.16□□□□□ -1.26
TMEM39A-210ENST00000490099 APOHP02749 345 aaPredicted RBP7.16□□□□□ -1.26
TMEM39A-210ENST00000490099 OR4E1P0C645 316 aa7.16□□□□□ -1.26
TMEM39A-210ENST00000490099 ANXA7P20073 488 aaKnown RBP7.16□□□□□ -1.26
TMEM39A-210ENST00000490099 VAMP1P23763 118 aa7.16□□□□□ -1.26
TMEM39A-210ENST00000490099 CRYBB3P26998 211 aa7.16□□□□□ -1.26
TMEM39A-210ENST00000490099 SRPXP78539 464 aa7.16□□□□□ -1.26
TMEM39A-210ENST00000490099 C2orf83Q53S99 150 aa7.16□□□□□ -1.26
TMEM39A-210ENST00000490099 NMSQ5H8A3 153 aa7.16□□□□□ -1.26
TMEM39A-210ENST00000490099 Q6ZNX1 250 aa7.16□□□□□ -1.26
TMEM39A-210ENST00000490099 SLC35G3Q8N808 338 aa7.16□□□□□ -1.26
TMEM39A-210ENST00000490099 TMEM170AQ8WVE7 144 aa7.16□□□□□ -1.26
TMEM39A-210ENST00000490099 IL22RA2Q969J5 263 aa7.16□□□□□ -1.26
TMEM39A-210ENST00000490099 TMEM230Q96A57 120 aa7.16□□□□□ -1.26
TMEM39A-210ENST00000490099 PINX1Q96BK5 328 aaKnown RBP7.16□□□□□ -1.26
TMEM39A-210ENST00000490099 GPR146Q96CH1 333 aa7.16□□□□□ -1.26
TMEM39A-210ENST00000490099 GINS3Q9BRX5 216 aa7.16□□□□□ -1.26
TMEM39A-210ENST00000490099 UBQLN2Q9UHD9 624 aa7.16□□□□□ -1.26
TMEM39A-210ENST00000490099 FLVCR2Q9UPI3 526 aa7.16□□□□□ -1.26
TMEM39A-210ENST00000490099 PUS1Q9Y606 427 aaKnown RBP eCLIP7.16□□□□□ -1.26
TMEM39A-210ENST00000490099 DFFBO76075 338 aa7.15□□□□□ -1.26
TMEM39A-210ENST00000490099 HTR2BP41595 481 aa7.15□□□□□ -1.26
TMEM39A-210ENST00000490099 SUPT4H1P63272 117 aaKnown RBP7.15□□□□□ -1.26
TMEM39A-210ENST00000490099 EWSR1Q01844 656 aaKnown RBP eCLIP7.15□□□□□ -1.26
TMEM39A-210ENST00000490099 DHRS2Q13268 280 aa7.15□□□□□ -1.26
TMEM39A-210ENST00000490099 TMEM187Q14656 261 aa7.15□□□□□ -1.26
TMEM39A-210ENST00000490099 TCF24Q7RTU0 167 aa7.15□□□□□ -1.26
TMEM39A-210ENST00000490099 LYG2Q86SG7 212 aa7.15□□□□□ -1.26
TMEM39A-210ENST00000490099 STPG3Q8N7X2 389 aa7.15□□□□□ -1.26
TMEM39A-210ENST00000490099 COQ8AQ8NI60 647 aa7.15□□□□□ -1.26
TMEM39A-210ENST00000490099 ZNF431Q8TF32 576 aaPredicted RBP7.15□□□□□ -1.26
TMEM39A-210ENST00000490099 ST8SIA2Q92186 375 aa7.15□□□□□ -1.26
TMEM39A-210ENST00000490099 CACFD1Q9UGQ2 172 aa7.15□□□□□ -1.26
TMEM39A-210ENST00000490099 LYSTQ99698 3801 aa7.14□□□□□ -1.27
TMEM39A-210ENST00000490099 TRAV30A0A087WSZ9 112 aa7.14□□□□□ -1.27
TMEM39A-210ENST00000490099 C9orf170A2RU37 121 aa7.14□□□□□ -1.27
TMEM39A-210ENST00000490099 C7orf66A4D0T2 115 aa7.14□□□□□ -1.27
TMEM39A-210ENST00000490099 SFT2D2O95562 160 aa7.14□□□□□ -1.27
TMEM39A-210ENST00000490099 IGLC1P0CG04 106 aa7.14□□□□□ -1.27
TMEM39A-210ENST00000490099 PAFAH1B2P68402 229 aa7.14□□□□□ -1.27
TMEM39A-210ENST00000490099 PPP1R1AQ13522 171 aa7.14□□□□□ -1.27
TMEM39A-210ENST00000490099 ZNF124Q15973 351 aa7.14□□□□□ -1.27
TMEM39A-210ENST00000490099 DEFB135Q30KP9 77 aa7.14□□□□□ -1.27
TMEM39A-210ENST00000490099 PRSS54Q6PEW0 395 aa7.14□□□□□ -1.27
TMEM39A-210ENST00000490099 APRG1Q8IVJ8 170 aa7.14□□□□□ -1.27
TMEM39A-210ENST00000490099 RNASEH2CQ8TDP1 164 aaKnown RBP7.14□□□□□ -1.27
TMEM39A-210ENST00000490099 PDCD10Q9BUL8 212 aa7.14□□□□□ -1.27
TMEM39A-210ENST00000490099 CSTL1Q9H114 145 aa7.14□□□□□ -1.27
TMEM39A-210ENST00000490099 MS4A6AQ9H2W1 248 aa7.14□□□□□ -1.27
TMEM39A-210ENST00000490099 CACNG5Q9UF02 275 aa7.14□□□□□ -1.27
TMEM39A-210ENST00000490099 ALG5Q9Y673 324 aa7.14□□□□□ -1.27
TMEM39A-210ENST00000490099 IGHV3OR16-13A0A075B7E8 117 aa7.13□□□□□ -1.27
TMEM39A-210ENST00000490099 IGHV3-74A0A0B4J1X5 117 aa7.13□□□□□ -1.27
TMEM39A-210ENST00000490099 A0A0B4J2A0 478 aa7.13□□□□□ -1.27
TMEM39A-210ENST00000490099 A0A0J9YWU9 116 aa7.13□□□□□ -1.27
TMEM39A-210ENST00000490099 DUXBA0A1W2PPF3 345 aa7.13□□□□□ -1.27
TMEM39A-210ENST00000490099 MPTX1A8MV57 137 aa7.13□□□□□ -1.27
TMEM39A-210ENST00000490099 SSNA1O43805 119 aa7.13□□□□□ -1.27
TMEM39A-210ENST00000490099 SLC25A4P12235 298 aa7.13□□□□□ -1.27
TMEM39A-210ENST00000490099 RPL35AP18077 110 aaKnown RBP7.13□□□□□ -1.27
TMEM39A-210ENST00000490099 NPPCP23582 126 aa7.13□□□□□ -1.27
TMEM39A-210ENST00000490099 HOXA1P49639 335 aaPredicted RBP7.13□□□□□ -1.27
TMEM39A-210ENST00000490099 YPEL3P61236 119 aaPredicted RBP7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms