RNA–Protein interactions for RNA: ENST00000488128.6

COL16A1-214, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 2,854 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-214ENST00000488128 LINC00322Q6ZN03 302 aaPredicted RBP11.53□□□□□ -0.56
COL16A1-214ENST00000488128 PNKDQ8N490 385 aa11.53□□□□□ -0.56
COL16A1-214ENST00000488128 SLC25A2Q9BXI2 301 aa11.53□□□□□ -0.56
COL16A1-214ENST00000488128 SLC25A10Q9UBX3 287 aaPredicted RBP11.53□□□□□ -0.56
COL16A1-214ENST00000488128 TRAV8-6A0A0B4J262 113 aa11.53□□□□□ -0.56
COL16A1-214ENST00000488128 IGHV1-24A0A0C4DH33 117 aa11.53□□□□□ -0.56
COL16A1-214ENST00000488128 SAP30O75446 220 aa11.53□□□□□ -0.56
COL16A1-214ENST00000488128 LEPROTL1O95214 131 aa11.53□□□□□ -0.56
COL16A1-214ENST00000488128 APELAP0DMC3 54 aa11.53□□□□□ -0.56
COL16A1-214ENST00000488128 UQCRFS1P47985 274 aa11.53□□□□□ -0.56
COL16A1-214ENST00000488128 CALYQ9NYX4 217 aa11.53□□□□□ -0.56
COL16A1-214ENST00000488128 ZZEF1O43149 2961 aa11.53□□□□□ -0.56
COL16A1-214ENST00000488128 TRGV8A0A0C4DH27 118 aa11.53□□□□□ -0.56
COL16A1-214ENST00000488128 PSG9Q00887 426 aa11.53□□□□□ -0.56
COL16A1-214ENST00000488128 COX19Q49B96 90 aa11.53□□□□□ -0.56
COL16A1-214ENST00000488128 LRRC10Q5BKY1 277 aa11.53□□□□□ -0.56
COL16A1-214ENST00000488128 Q71RC1 249 aaPredicted RBP11.53□□□□□ -0.56
COL16A1-214ENST00000488128 MBD6Q96DN6 1003 aa11.53□□□□□ -0.56
COL16A1-214ENST00000488128 FER1L6-AS2Q96M78 137 aa11.53□□□□□ -0.56
COL16A1-214ENST00000488128 E7EUB6 86 aa11.52□□□□□ -0.57
COL16A1-214ENST00000488128 SYS1-DBNDD2H3BUS1 97 aa11.52□□□□□ -0.57
COL16A1-214ENST00000488128 REG1BP48304 166 aa11.52□□□□□ -0.57
COL16A1-214ENST00000488128 PLA2G2CQ5R387 149 aa11.52□□□□□ -0.57
COL16A1-214ENST00000488128 DDB2Q92466 427 aa11.52□□□□□ -0.57
COL16A1-214ENST00000488128 FAM167A-AS1Q96KT0 104 aa11.52□□□□□ -0.57
COL16A1-214ENST00000488128 OR2V2Q96R30 315 aa11.52□□□□□ -0.57
COL16A1-214ENST00000488128 JPT1Q9UK76 154 aa11.52□□□□□ -0.57
COL16A1-214ENST00000488128 A0A1W2PRE2 83 aa11.52□□□□□ -0.57
COL16A1-214ENST00000488128 C10orf55Q5SWW7 151 aa11.52□□□□□ -0.57
COL16A1-214ENST00000488128 FAM120AOSQ5T036 256 aa11.52□□□□□ -0.57
COL16A1-214ENST00000488128 SLC25A34Q6PIV7 304 aa11.52□□□□□ -0.57
COL16A1-214ENST00000488128 IGHV3-21A0A0B4J1V1 117 aa11.51□□□□□ -0.57
COL16A1-214ENST00000488128 GAGE12BA1L429 117 aa11.51□□□□□ -0.57
COL16A1-214ENST00000488128 PEX7O00628 323 aa11.51□□□□□ -0.57
COL16A1-214ENST00000488128 PRR7Q8TB68 274 aa11.51□□□□□ -0.57
COL16A1-214ENST00000488128 CORO2AQ92828 525 aa11.51□□□□□ -0.57
COL16A1-214ENST00000488128 SARAFQ96BY9 339 aa11.51□□□□□ -0.57
COL16A1-214ENST00000488128 FOXA2Q9Y261 457 aaPredicted RBP11.51□□□□□ -0.57
COL16A1-214ENST00000488128 PPIAL4DF5H284 164 aa11.51□□□□□ -0.57
COL16A1-214ENST00000488128 COX7A2P2O60397 106 aa11.51□□□□□ -0.57
COL16A1-214ENST00000488128 MOGAT3Q86VF5 341 aa11.51□□□□□ -0.57
COL16A1-214ENST00000488128 PAXXQ9BUH6 204 aa11.51□□□□□ -0.57
COL16A1-214ENST00000488128 CNOT1A5YKK6 2376 aaKnown RBP11.5□□□□□ -0.57
COL16A1-214ENST00000488128 TEX50A0A1B0GTY4 177 aa11.5□□□□□ -0.57
COL16A1-214ENST00000488128 FAM90A9PA6NNJ1 464 aa11.5□□□□□ -0.57
COL16A1-214ENST00000488128 KLK10O43240 276 aa11.5□□□□□ -0.57
COL16A1-214ENST00000488128 APOA2P02652 100 aa11.5□□□□□ -0.57
COL16A1-214ENST00000488128 CECR9P0C854 216 aa11.5□□□□□ -0.57
COL16A1-214ENST00000488128 ORM2P19652 201 aa11.5□□□□□ -0.57
COL16A1-214ENST00000488128 VWA1Q6PCB0 445 aa11.5□□□□□ -0.57
COL16A1-214ENST00000488128 GRAMD2BQ96HH9 432 aa11.5□□□□□ -0.57
COL16A1-214ENST00000488128 CACNA1HO95180 2353 aa11.5□□□□□ -0.57
COL16A1-214ENST00000488128 NKX2-8O15522 239 aa11.5□□□□□ -0.57
COL16A1-214ENST00000488128 HOXC12P31275 282 aa11.5□□□□□ -0.57
COL16A1-214ENST00000488128 CCL11P51671 97 aa11.5□□□□□ -0.57
COL16A1-214ENST00000488128 ZNF329Q86UD4 541 aa11.5□□□□□ -0.57
COL16A1-214ENST00000488128 WFDC8Q8IUA0 241 aa11.5□□□□□ -0.57
COL16A1-214ENST00000488128 GCSAMQ8N6F7 178 aa11.5□□□□□ -0.57
COL16A1-214ENST00000488128 TEX45Q8NA69 505 aa11.5□□□□□ -0.57
COL16A1-214ENST00000488128 TMEM116Q8NCL8 245 aa11.5□□□□□ -0.57
COL16A1-214ENST00000488128 NPIPB3Q92617 1050 aa11.5□□□□□ -0.57
COL16A1-214ENST00000488128 COMMD5Q9GZQ3 224 aa11.5□□□□□ -0.57
COL16A1-214ENST00000488128 SVEP1Q4LDE5 3571 aa11.5□□□□□ -0.57
COL16A1-214ENST00000488128 SPRY3O43610 288 aa11.5□□□□□ -0.57
COL16A1-214ENST00000488128 SLC25A5P05141 298 aaKnown RBP11.5□□□□□ -0.57
COL16A1-214ENST00000488128 MSMPQ1L6U9 139 aa11.5□□□□□ -0.57
COL16A1-214ENST00000488128 TRAV8-1A0A0A6YYK1 113 aa11.49□□□□□ -0.57
COL16A1-214ENST00000488128 HSBP1L1C9JCN9 74 aa11.49□□□□□ -0.57
COL16A1-214ENST00000488128 GTSF1Q8WW33 167 aa11.49□□□□□ -0.57
COL16A1-214ENST00000488128 MEGF9Q9H1U4 602 aa11.49□□□□□ -0.57
COL16A1-214ENST00000488128 FNDC4Q9H6D8 234 aaPredicted RBP11.49□□□□□ -0.57
COL16A1-214ENST00000488128 MRPL36Q9P0J6 103 aaKnown RBP11.49□□□□□ -0.57
COL16A1-214ENST00000488128 PGPA6NDG6 321 aa11.49□□□□□ -0.57
COL16A1-214ENST00000488128 MGST3O14880 152 aa11.49□□□□□ -0.57
COL16A1-214ENST00000488128 MOSP00540 346 aa11.49□□□□□ -0.57
COL16A1-214ENST00000488128 RUSC1-AS1Q66K80 236 aa11.49□□□□□ -0.57
COL16A1-214ENST00000488128 PATE2Q6UY27 113 aa11.49□□□□□ -0.57
COL16A1-214ENST00000488128 C17orf58Q2M2W7 97 aa11.48□□□□□ -0.57
COL16A1-214ENST00000488128 DEFB125Q8N687 156 aa11.48□□□□□ -0.57
COL16A1-214ENST00000488128 SAA1P0DJI8 122 aaPredicted RBP11.48□□□□□ -0.57
COL16A1-214ENST00000488128 RNASE2P10153 161 aaKnown RBP11.48□□□□□ -0.57
COL16A1-214ENST00000488128 HIST1H1EP10412 219 aaKnown RBP11.48□□□□□ -0.57
COL16A1-214ENST00000488128 FXYD7P58549 80 aa11.48□□□□□ -0.57
COL16A1-214ENST00000488128 PRCDQ00LT1 54 aa11.48□□□□□ -0.57
COL16A1-214ENST00000488128 KLF5Q13887 457 aaPredicted RBP11.48□□□□□ -0.57
COL16A1-214ENST00000488128 C10orf113Q5VZT2 155 aa11.48□□□□□ -0.57
COL16A1-214ENST00000488128 HBBP68871 147 aa11.47□□□□□ -0.57
COL16A1-214ENST00000488128 RHOGP84095 191 aa11.47□□□□□ -0.57
COL16A1-214ENST00000488128 CD69Q07108 199 aa11.47□□□□□ -0.57
COL16A1-214ENST00000488128 TMEM177Q53S58 311 aa11.47□□□□□ -0.57
COL16A1-214ENST00000488128 SMIM15Q7Z3B0 74 aa11.47□□□□□ -0.57
COL16A1-214ENST00000488128 WIPF2Q8TF74 440 aaPredicted RBP11.47□□□□□ -0.57
COL16A1-214ENST00000488128 LINC00305Q7Z4B0 112 aa11.47□□□□□ -0.57
COL16A1-214ENST00000488128 TPPP3Q9BW30 176 aa11.47□□□□□ -0.57
COL16A1-214ENST00000488128 GSX1Q9H4S2 264 aaPredicted RBP11.47□□□□□ -0.57
COL16A1-214ENST00000488128 ST20Q9HBF5 79 aa11.47□□□□□ -0.57
COL16A1-214ENST00000488128 PPBPP02775 128 aa11.46□□□□□ -0.57
COL16A1-214ENST00000488128 TMUB1Q9BVT8 246 aa11.46□□□□□ -0.57
COL16A1-214ENST00000488128 HILPDAQ9Y5L2 63 aa11.46□□□□□ -0.57
COL16A1-214ENST00000488128 UPK2O00526 184 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms