RNA–Protein interactions for RNA: ENST00000476739.5

HDAC3-208, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 422 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-208ENST00000476739 OR1L6Q8NGR2 347 aa7.37□□□□□ -1.23
HDAC3-208ENST00000476739 MRAPQ8TCY5 172 aa7.37□□□□□ -1.23
HDAC3-208ENST00000476739 OR4C12Q96R67 309 aa7.37□□□□□ -1.23
HDAC3-208ENST00000476739 RBKSQ9H477 322 aa7.37□□□□□ -1.23
HDAC3-208ENST00000476739 FNDC4Q9H6D8 234 aaPredicted RBP7.37□□□□□ -1.23
HDAC3-208ENST00000476739 ENY2Q9NPA8 101 aa7.37□□□□□ -1.23
HDAC3-208ENST00000476739 MRPL36Q9P0J6 103 aaKnown RBP7.37□□□□□ -1.23
HDAC3-208ENST00000476739 HSPB7Q9UBY9 170 aa7.37□□□□□ -1.23
HDAC3-208ENST00000476739 SELENOKQ9Y6D0 94 aa7.37□□□□□ -1.23
HDAC3-208ENST00000476739 IGHV3OR16-8A0A075B7F1 116 aa7.36□□□□□ -1.23
HDAC3-208ENST00000476739 A0A1B0GU03 582 aa7.36□□□□□ -1.23
HDAC3-208ENST00000476739 DUXBA0A1W2PPF3 345 aa7.36□□□□□ -1.23
HDAC3-208ENST00000476739 HMSDA8MTL9 139 aa7.36□□□□□ -1.23
HDAC3-208ENST00000476739 CEBPZOSA8MTT3 80 aa7.36□□□□□ -1.23
HDAC3-208ENST00000476739 LGALS9O00182 355 aa7.36□□□□□ -1.23
HDAC3-208ENST00000476739 CYB5BO43169 146 aa7.36□□□□□ -1.23
HDAC3-208ENST00000476739 IGLV1-51P01701 117 aa7.36□□□□□ -1.23
HDAC3-208ENST00000476739 CTSGP08311 255 aa7.36□□□□□ -1.23
HDAC3-208ENST00000476739 RAB4AP20338 218 aa7.36□□□□□ -1.23
HDAC3-208ENST00000476739 RAP2BP61225 183 aa7.36□□□□□ -1.23
HDAC3-208ENST00000476739 TNFRSF9Q07011 255 aa7.36□□□□□ -1.23
HDAC3-208ENST00000476739 FCN2Q15485 313 aa7.36□□□□□ -1.23
HDAC3-208ENST00000476739 LGALSLQ3ZCW2 172 aaPredicted RBP7.36□□□□□ -1.23
HDAC3-208ENST00000476739 C4orf46Q504U0 113 aa7.36□□□□□ -1.23
HDAC3-208ENST00000476739 Q56UQ5 140 aa7.36□□□□□ -1.23
HDAC3-208ENST00000476739 DNLZQ5SXM8 178 aa7.36□□□□□ -1.23
HDAC3-208ENST00000476739 REC114Q7Z4M0 266 aa7.36□□□□□ -1.23
HDAC3-208ENST00000476739 SVBPQ8N300 66 aa7.36□□□□□ -1.23
HDAC3-208ENST00000476739 OR1S1Q8NH92 325 aa7.36□□□□□ -1.23
HDAC3-208ENST00000476739 CACNG8Q8WXS5 425 aa7.36□□□□□ -1.23
HDAC3-208ENST00000476739 LINC00052Q96N35 136 aa7.36□□□□□ -1.23
HDAC3-208ENST00000476739 ELOVL1Q9BW60 279 aa7.36□□□□□ -1.23
HDAC3-208ENST00000476739 NKX6-2Q9C056 277 aaPredicted RBP7.36□□□□□ -1.23
HDAC3-208ENST00000476739 HEYLQ9NQ87 328 aaPredicted RBP7.36□□□□□ -1.23
HDAC3-208ENST00000476739 NUDT15Q9NV35 164 aa7.36□□□□□ -1.23
HDAC3-208ENST00000476739 ZNF256Q9Y2P7 627 aaPredicted RBP7.36□□□□□ -1.23
HDAC3-208ENST00000476739 SORL1Q92673 2214 aa7.35□□□□□ -1.23
HDAC3-208ENST00000476739 ZNF320A2RRD8 509 aa7.35□□□□□ -1.23
HDAC3-208ENST00000476739 TMEM213A2RRL7 107 aa7.35□□□□□ -1.23
HDAC3-208ENST00000476739 IZUMO1RA6ND01 250 aa7.35□□□□□ -1.23
HDAC3-208ENST00000476739 C2orf70A6NJV1 201 aa7.35□□□□□ -1.23
HDAC3-208ENST00000476739 FOLR2P14207 255 aa7.35□□□□□ -1.23
HDAC3-208ENST00000476739 RAB5BP61020 215 aa7.35□□□□□ -1.23
HDAC3-208ENST00000476739 TM4SF20Q53R12 229 aa7.35□□□□□ -1.23
HDAC3-208ENST00000476739 C2orf83Q53S99 150 aa7.35□□□□□ -1.23
HDAC3-208ENST00000476739 SFT2D1Q8WV19 159 aa7.35□□□□□ -1.23
HDAC3-208ENST00000476739 BSCL2Q96G97 398 aaPredicted RBP7.35□□□□□ -1.23
HDAC3-208ENST00000476739 PEMTQ9UBM1 199 aa7.35□□□□□ -1.23
HDAC3-208ENST00000476739 TMED3Q9Y3Q3 217 aa7.35□□□□□ -1.23
HDAC3-208ENST00000476739 RAB19A4D1S5 217 aa7.34□□□□□ -1.23
HDAC3-208ENST00000476739 A8MWP6 167 aa7.34□□□□□ -1.23
HDAC3-208ENST00000476739 L7N2F9 121 aa7.34□□□□□ -1.23
HDAC3-208ENST00000476739 CLN5O75503 358 aa7.34□□□□□ -1.23
HDAC3-208ENST00000476739 LY86O95711 162 aa7.34□□□□□ -1.23
HDAC3-208ENST00000476739 GIPP09681 153 aaPredicted RBP7.34□□□□□ -1.23
HDAC3-208ENST00000476739 IAPPP10997 89 aa7.34□□□□□ -1.23
HDAC3-208ENST00000476739 SLC25A6P12236 298 aa7.34□□□□□ -1.23
HDAC3-208ENST00000476739 GP9P14770 177 aa7.34□□□□□ -1.23
HDAC3-208ENST00000476739 PVALBP20472 110 aaPredicted RBP7.34□□□□□ -1.23
HDAC3-208ENST00000476739 FCGR2BP31994 310 aaPredicted RBP7.34□□□□□ -1.23
HDAC3-208ENST00000476739 OPRK1P41145 380 aa7.34□□□□□ -1.23
HDAC3-208ENST00000476739 SUB1P53999 127 aaKnown RBP eCLIP7.34□□□□□ -1.23
HDAC3-208ENST00000476739 MFAP4P55083 255 aa7.34□□□□□ -1.23
HDAC3-208ENST00000476739 FAM106AQ4KMX7 169 aa7.34□□□□□ -1.23
HDAC3-208ENST00000476739 DEFB121Q5J5C9 76 aa7.34□□□□□ -1.23
HDAC3-208ENST00000476739 SLC24A4Q8NFF2 622 aa7.34□□□□□ -1.23
HDAC3-208ENST00000476739 COQ8AQ8NI60 647 aa7.34□□□□□ -1.23
HDAC3-208ENST00000476739 DTD1Q8TEA8 209 aa7.34□□□□□ -1.23
HDAC3-208ENST00000476739 MITD1Q8WV92 249 aa7.34□□□□□ -1.23
HDAC3-208ENST00000476739 NARS2Q96I59 477 aaKnown RBP7.34□□□□□ -1.23
HDAC3-208ENST00000476739 MAGT1Q9H0U3 335 aa7.34□□□□□ -1.23
HDAC3-208ENST00000476739 HIPK2Q9H2X6 1198 aa7.34□□□□□ -1.23
HDAC3-208ENST00000476739 GSN-AS1Q9NRJ2 163 aa7.34□□□□□ -1.23
HDAC3-208ENST00000476739 SIGLEC8Q9NYZ4 499 aa7.34□□□□□ -1.23
HDAC3-208ENST00000476739 LSM4Q9Y4Z0 139 aaKnown RBP7.34□□□□□ -1.23
HDAC3-208ENST00000476739 ZNF207O43670 478 aaKnown RBP7.33□□□□□ -1.24
HDAC3-208ENST00000476739 IFNA10P01566 189 aa7.33□□□□□ -1.24
HDAC3-208ENST00000476739 NMBP08949 121 aa7.33□□□□□ -1.24
HDAC3-208ENST00000476739 CBLN1P23435 193 aa7.33□□□□□ -1.24
HDAC3-208ENST00000476739 NPY1RP25929 384 aa7.33□□□□□ -1.24
HDAC3-208ENST00000476739 DEFB114Q30KQ6 69 aa7.33□□□□□ -1.24
HDAC3-208ENST00000476739 CD300EQ496F6 205 aaPredicted RBP7.33□□□□□ -1.24
HDAC3-208ENST00000476739 SPSB3Q6PJ21 355 aa7.33□□□□□ -1.24
HDAC3-208ENST00000476739 OR4D5Q8NGN0 318 aa7.33□□□□□ -1.24
HDAC3-208ENST00000476739 TMEM190Q8WZ59 177 aa7.33□□□□□ -1.24
HDAC3-208ENST00000476739 OR10C1Q96KK4 312 aa7.33□□□□□ -1.24
HDAC3-208ENST00000476739 ATP6V0BQ99437 205 aa7.33□□□□□ -1.24
HDAC3-208ENST00000476739 TXN2Q99757 166 aa7.33□□□□□ -1.24
HDAC3-208ENST00000476739 GPN1Q9HCN4 374 aaPredicted RBP7.33□□□□□ -1.24
HDAC3-208ENST00000476739 PIGBOS1A0A0B4J2F0 54 aa7.32□□□□□ -1.24
HDAC3-208ENST00000476739 C15orf62A8K5M9 175 aa7.32□□□□□ -1.24
HDAC3-208ENST00000476739 LINC00587B1AMM8 73 aa7.32□□□□□ -1.24
HDAC3-208ENST00000476739 CORTO00230 105 aa7.32□□□□□ -1.24
HDAC3-208ENST00000476739 NDUFA4O00483 81 aa7.32□□□□□ -1.24
HDAC3-208ENST00000476739 CCSO14618 274 aa7.32□□□□□ -1.24
HDAC3-208ENST00000476739 GNG7O60262 68 aa7.32□□□□□ -1.24
HDAC3-208ENST00000476739 MPC2O95563 127 aa7.32□□□□□ -1.24
HDAC3-208ENST00000476739 TMEM50AO95807 157 aa7.32□□□□□ -1.24
HDAC3-208ENST00000476739 APOC3P02656 99 aa7.32□□□□□ -1.24
HDAC3-208ENST00000476739 C8orf88P0DMB2 117 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms