RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 RELQ04864 619 aaPredicted RBP11.38□□□□□ -0.59
VARS-223ENST00000474643 IAH1Q2TAA2 248 aaPredicted RBP11.38□□□□□ -0.59
VARS-223ENST00000474643 TM4SF20Q53R12 229 aa11.38□□□□□ -0.59
VARS-223ENST00000474643 TMEM61Q8N0U2 210 aa11.38□□□□□ -0.59
VARS-223ENST00000474643 OR4D5Q8NGN0 318 aa11.38□□□□□ -0.59
VARS-223ENST00000474643 CHRDL1Q9BU40 450 aa11.38□□□□□ -0.59
VARS-223ENST00000474643 NMES1Q9C002 83 aa11.38□□□□□ -0.59
VARS-223ENST00000474643 PAIP2BQ9ULR5 123 aaKnown RBP11.38□□□□□ -0.59
VARS-223ENST00000474643 NDUFA4O00483 81 aa11.37□□□□□ -0.59
VARS-223ENST00000474643 IAPPP10997 89 aa11.37□□□□□ -0.59
VARS-223ENST00000474643 RRAS2P62070 204 aaPredicted RBP11.37□□□□□ -0.59
VARS-223ENST00000474643 IL15RAQ13261 267 aa11.37□□□□□ -0.59
VARS-223ENST00000474643 C2orf83Q53S99 150 aa11.37□□□□□ -0.59
VARS-223ENST00000474643 LAMTOR1Q6IAA8 161 aa11.37□□□□□ -0.59
VARS-223ENST00000474643 CIB3Q96Q77 187 aaPredicted RBP11.37□□□□□ -0.59
VARS-223ENST00000474643 MLXQ9UH92 298 aa11.37□□□□□ -0.59
VARS-223ENST00000474643 U3KQ87 197 aa11.37□□□□□ -0.59
VARS-223ENST00000474643 F8W735 103 aaPredicted RBP11.36□□□□□ -0.59
VARS-223ENST00000474643 WRBO00258 174 aa11.36□□□□□ -0.59
VARS-223ENST00000474643 JTBO76095 146 aa11.36□□□□□ -0.59
VARS-223ENST00000474643 IFNA4P05014 189 aa11.36□□□□□ -0.59
VARS-223ENST00000474643 BSXQ3C1V8 233 aa11.36□□□□□ -0.59
VARS-223ENST00000474643 ETFRF1Q6IPR1 90 aa11.36□□□□□ -0.59
VARS-223ENST00000474643 UNQ9165/PRO28630Q6UXU0 137 aa11.36□□□□□ -0.59
VARS-223ENST00000474643 ZBTB8BQ8NAP8 495 aaPredicted RBP11.36□□□□□ -0.59
VARS-223ENST00000474643 RNASEH2CQ8TDP1 164 aaKnown RBP11.36□□□□□ -0.59
VARS-223ENST00000474643 OR10C1Q96KK4 312 aa11.36□□□□□ -0.59
VARS-223ENST00000474643 GGTLC1Q9BX51 225 aa11.36□□□□□ -0.59
VARS-223ENST00000474643 ZNF436Q9C0F3 470 aaPredicted RBP11.36□□□□□ -0.59
VARS-223ENST00000474643 MAGT1Q9H0U3 335 aa11.36□□□□□ -0.59
VARS-223ENST00000474643 MRPL27Q9P0M9 148 aaKnown RBP11.36□□□□□ -0.59
VARS-223ENST00000474643 IGHV3OR16-8A0A075B7F1 116 aa11.35□□□□□ -0.59
VARS-223ENST00000474643 LOC102724200A0A096LPH7 203 aaPredicted RBP11.35□□□□□ -0.59
VARS-223ENST00000474643 LCE6AA0A183 80 aa11.35□□□□□ -0.59
VARS-223ENST00000474643 RBMY1BA6NDE4 496 aaKnown RBP11.35□□□□□ -0.59
VARS-223ENST00000474643 C5orf51A6NDU8 294 aa11.35□□□□□ -0.59
VARS-223ENST00000474643 RBMY1EA6NEQ0 496 aaKnown RBP11.35□□□□□ -0.59
VARS-223ENST00000474643 CTSGP08311 255 aa11.35□□□□□ -0.59
VARS-223ENST00000474643 RBMY1DP0C7P1 496 aaKnown RBP11.35□□□□□ -0.59
VARS-223ENST00000474643 FCGR2BP31994 310 aaPredicted RBP11.35□□□□□ -0.59
VARS-223ENST00000474643 ADMP35318 185 aa11.35□□□□□ -0.59
VARS-223ENST00000474643 NKX2-1P43699 371 aaPredicted RBP11.35□□□□□ -0.59
VARS-223ENST00000474643 ELLP55199 621 aaPredicted RBP11.35□□□□□ -0.59
VARS-223ENST00000474643 TAS2R30P59541 319 aa11.35□□□□□ -0.59
VARS-223ENST00000474643 MLANAQ16655 118 aa11.35□□□□□ -0.59
VARS-223ENST00000474643 CHAC2Q8WUX2 184 aa11.35□□□□□ -0.59
VARS-223ENST00000474643 TMEM190Q8WZ59 177 aa11.35□□□□□ -0.59
VARS-223ENST00000474643 DAZ1Q9NQZ3 744 aaKnown RBP11.35□□□□□ -0.59
VARS-223ENST00000474643 TRAV25A0A0B4J276 109 aa11.34□□□□□ -0.59
VARS-223ENST00000474643 MPTX1A8MV57 137 aa11.34□□□□□ -0.59
VARS-223ENST00000474643 GOSR2O14653 212 aa11.34□□□□□ -0.59
VARS-223ENST00000474643 ZNF207O43670 478 aaKnown RBP11.34□□□□□ -0.59
VARS-223ENST00000474643 SYNGR2O43760 224 aa11.34□□□□□ -0.59
VARS-223ENST00000474643 SCGB1D2O95969 90 aa11.34□□□□□ -0.59
VARS-223ENST00000474643 H2BFSP57053 126 aa11.34□□□□□ -0.59
VARS-223ENST00000474643 RAB11AP62491 216 aa11.34□□□□□ -0.59
VARS-223ENST00000474643 RPP30P78346 268 aaKnown RBP11.34□□□□□ -0.59
VARS-223ENST00000474643 PVRIGQ6DKI7 326 aa11.34□□□□□ -0.59
VARS-223ENST00000474643 RAB40CQ96S21 281 aa11.34□□□□□ -0.59
VARS-223ENST00000474643 FNDC4Q9H6D8 234 aaPredicted RBP11.34□□□□□ -0.59
VARS-223ENST00000474643 MGAT4CQ9UBM8 478 aa11.34□□□□□ -0.59
VARS-223ENST00000474643 FAM25EA8MYX2 175 aa11.33□□□□□ -0.6
VARS-223ENST00000474643 CLN5O75503 358 aa11.33□□□□□ -0.6
VARS-223ENST00000474643 TMEM50AO95807 157 aa11.33□□□□□ -0.6
VARS-223ENST00000474643 GIPP09681 153 aaPredicted RBP11.33□□□□□ -0.6
VARS-223ENST00000474643 SLC25A4P12235 298 aa11.33□□□□□ -0.6
VARS-223ENST00000474643 RND2P52198 227 aa11.33□□□□□ -0.6
VARS-223ENST00000474643 OR4X1Q8NH49 305 aa11.33□□□□□ -0.6
VARS-223ENST00000474643 ACY3Q96HD9 319 aa11.33□□□□□ -0.6
VARS-223ENST00000474643 SPAG8Q99932 426 aaPredicted RBP11.33□□□□□ -0.6
VARS-223ENST00000474643 GSKIPQ9P0R6 139 aa11.33□□□□□ -0.6
VARS-223ENST00000474643 TRAV30A0A087WSZ9 112 aa11.32□□□□□ -0.6
VARS-223ENST00000474643 CCSO14618 274 aa11.32□□□□□ -0.6
VARS-223ENST00000474643 MBPP02686 304 aaPredicted RBP11.32□□□□□ -0.6
VARS-223ENST00000474643 PET100P0DJ07 73 aa11.32□□□□□ -0.6
VARS-223ENST00000474643 APOC4P55056 127 aa11.32□□□□□ -0.6
VARS-223ENST00000474643 FCN2Q15485 313 aa11.32□□□□□ -0.6
VARS-223ENST00000474643 ZNF600Q6ZNG1 722 aa11.32□□□□□ -0.6
VARS-223ENST00000474643 OR11H7Q8NGC8 314 aa11.32□□□□□ -0.6
VARS-223ENST00000474643 GINS3Q9BRX5 216 aa11.32□□□□□ -0.6
VARS-223ENST00000474643 OR4C46A6NHA9 309 aa11.31□□□□□ -0.6
VARS-223ENST00000474643 C15orf62A8K5M9 175 aa11.31□□□□□ -0.6
VARS-223ENST00000474643 K7EMT4 169 aa11.31□□□□□ -0.6
VARS-223ENST00000474643 RLN2P04090 185 aa11.31□□□□□ -0.6
VARS-223ENST00000474643 CXCL3P19876 107 aa11.31□□□□□ -0.6
VARS-223ENST00000474643 RAP2BP61225 183 aa11.31□□□□□ -0.6
VARS-223ENST00000474643 FGL1Q08830 312 aa11.31□□□□□ -0.6
VARS-223ENST00000474643 SPANXN5Q5MJ07 72 aa11.31□□□□□ -0.6
VARS-223ENST00000474643 LINC00322Q6ZN03 302 aaPredicted RBP11.31□□□□□ -0.6
VARS-223ENST00000474643 TMEM170AQ8WVE7 144 aa11.31□□□□□ -0.6
VARS-223ENST00000474643 SLC35E1Q96K37 410 aa11.31□□□□□ -0.6
VARS-223ENST00000474643 SMIM8Q96KF7 97 aa11.31□□□□□ -0.6
VARS-223ENST00000474643 MRPL36Q9P0J6 103 aaKnown RBP11.31□□□□□ -0.6
VARS-223ENST00000474643 UBQLN2Q9UHD9 624 aa11.31□□□□□ -0.6
VARS-223ENST00000474643 PUS1Q9Y606 427 aaKnown RBP eCLIP11.31□□□□□ -0.6
VARS-223ENST00000474643 DYNC2H1Q8NCM8 4307 aaKnown RBP11.31□□□□□ -0.6
VARS-223ENST00000474643 TENM2Q9NT68 2774 aa11.3□□□□□ -0.6
VARS-223ENST00000474643 CSMD3Q7Z407 3707 aa11.3□□□□□ -0.6
VARS-223ENST00000474643 TRAV14DV4A0A0A6YYC5 116 aa11.3□□□□□ -0.6
VARS-223ENST00000474643 H3BP45 60 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 105.9 ms