RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 OR4C6Q8NH72 309 aa0.84□□□□□ -2.27
SMC4-205ENST00000465563 DNAJC9Q8WXX5 260 aa0.84□□□□□ -2.27
SMC4-205ENST00000465563 ADAT3Q96EY9 351 aaPredicted RBP0.84□□□□□ -2.27
SMC4-205ENST00000465563 GINS4Q9BRT9 223 aa0.84□□□□□ -2.27
SMC4-205ENST00000465563 UQCC1Q9NVA1 299 aa0.84□□□□□ -2.27
SMC4-205ENST00000465563 OR5AC2Q9NZP5 309 aa0.84□□□□□ -2.27
SMC4-205ENST00000465563 TAF1LQ8IZX4 1826 aa0.84□□□□□ -2.28
SMC4-205ENST00000465563 MED1Q15648 1581 aaPredicted RBP0.83□□□□□ -2.28
SMC4-205ENST00000465563 EML5Q05BV3 1969 aa0.83□□□□□ -2.28
SMC4-205ENST00000465563 DOCK4Q8N1I0 1966 aa0.83□□□□□ -2.28
SMC4-205ENST00000465563 LOC110117498A0A087WWA1 95 aa0.83□□□□□ -2.28
SMC4-205ENST00000465563 TMEM114B3SHH9 223 aa0.83□□□□□ -2.28
SMC4-205ENST00000465563 OR1I1O60431 355 aa0.83□□□□□ -2.28
SMC4-205ENST00000465563 SERPINE1P05121 402 aa0.83□□□□□ -2.28
SMC4-205ENST00000465563 IL9P15248 144 aa0.83□□□□□ -2.28
SMC4-205ENST00000465563 KHDC3LQ587J8 217 aa0.83□□□□□ -2.28
SMC4-205ENST00000465563 SPANXN5Q5MJ07 72 aa0.83□□□□□ -2.28
SMC4-205ENST00000465563 DPPA3Q6W0C5 159 aa0.83□□□□□ -2.28
SMC4-205ENST00000465563 PHF13Q86YI8 300 aaPredicted RBP0.83□□□□□ -2.28
SMC4-205ENST00000465563 OR13D1Q8NGV5 346 aa0.83□□□□□ -2.28
SMC4-205ENST00000465563 PPP1R14BQ96C90 147 aa0.83□□□□□ -2.28
SMC4-205ENST00000465563 C2orf50Q96LR7 162 aa0.83□□□□□ -2.28
SMC4-205ENST00000465563 CMSS1Q9BQ75 279 aaKnown RBP0.83□□□□□ -2.28
SMC4-205ENST00000465563 TMEM133Q9H2Q1 129 aa0.83□□□□□ -2.28
SMC4-205ENST00000465563 TAS2R4Q9NYW5 299 aa0.83□□□□□ -2.28
SMC4-205ENST00000465563 GLTPQ9NZD2 209 aa0.83□□□□□ -2.28
SMC4-205ENST00000465563 FBXO5Q9UKT4 447 aa0.83□□□□□ -2.28
SMC4-205ENST00000465563 MYO18AQ92614 2054 aaKnown RBP0.83□□□□□ -2.28
SMC4-205ENST00000465563 ADGRB2O60241 1585 aa0.83□□□□□ -2.28
SMC4-205ENST00000465563 CHD3Q12873 2000 aaKnown RBP0.82□□□□□ -2.28
SMC4-205ENST00000465563 TRAV1-1A0A0B4J248 108 aa0.82□□□□□ -2.28
SMC4-205ENST00000465563 IGKV1-9A0A0C4DH69 117 aa0.82□□□□□ -2.28
SMC4-205ENST00000465563 LYZL6O75951 148 aa0.82□□□□□ -2.28
SMC4-205ENST00000465563 C8GP07360 202 aa0.82□□□□□ -2.28
SMC4-205ENST00000465563 BAALC-AS2P0C853 105 aa0.82□□□□□ -2.28
SMC4-205ENST00000465563 CYBAP13498 195 aa0.82□□□□□ -2.28
SMC4-205ENST00000465563 SSR2P43308 183 aa0.82□□□□□ -2.28
SMC4-205ENST00000465563 LCA10Q71F78 164 aa0.82□□□□□ -2.28
SMC4-205ENST00000465563 OOSP2Q86WS3 158 aa0.82□□□□□ -2.28
SMC4-205ENST00000465563 OR51A2Q8NGJ7 313 aa0.82□□□□□ -2.28
SMC4-205ENST00000465563 WFDC5Q8TCV5 224 aa0.82□□□□□ -2.28
SMC4-205ENST00000465563 ODF3Q96PU9 254 aa0.82□□□□□ -2.28
SMC4-205ENST00000465563 TRIM4Q9C037 500 aa0.82□□□□□ -2.28
SMC4-205ENST00000465563 CCDC90BQ9GZT6 254 aa0.82□□□□□ -2.28
SMC4-205ENST00000465563 OSTCQ9NRP0 149 aa0.82□□□□□ -2.28
SMC4-205ENST00000465563 hCG_1818297A0A087WSY0 165 aa0.81□□□□□ -2.28
SMC4-205ENST00000465563 A8MT66 165 aa0.81□□□□□ -2.28
SMC4-205ENST00000465563 PDE6DO43924 150 aa0.81□□□□□ -2.28
SMC4-205ENST00000465563 OR2B3O76000 313 aa0.81□□□□□ -2.28
SMC4-205ENST00000465563 S100A6P06703 90 aa0.81□□□□□ -2.28
SMC4-205ENST00000465563 OR4E1P0C645 316 aa0.81□□□□□ -2.28
SMC4-205ENST00000465563 PPIBP23284 216 aaKnown RBP0.81□□□□□ -2.28
SMC4-205ENST00000465563 SRIP30626 198 aa0.81□□□□□ -2.28
SMC4-205ENST00000465563 AP3S2P59780 193 aa0.81□□□□□ -2.28
SMC4-205ENST00000465563 FADDQ13158 208 aa0.81□□□□□ -2.28
SMC4-205ENST00000465563 Q6Q795 121 aa0.81□□□□□ -2.28
SMC4-205ENST00000465563 KRT222Q8N1A0 295 aa0.81□□□□□ -2.28
SMC4-205ENST00000465563 OR10J5Q8NHC4 309 aa0.81□□□□□ -2.28
SMC4-205ENST00000465563 EPDR1Q9UM22 224 aa0.81□□□□□ -2.28
SMC4-205ENST00000465563 HS3ST2Q9Y278 367 aa0.81□□□□□ -2.28
SMC4-205ENST00000465563 PCF11O94913 1555 aaKnown RBP0.81□□□□□ -2.28
SMC4-205ENST00000465563 UBR2Q8IWV8 1755 aa0.8□□□□□ -2.28
SMC4-205ENST00000465563 TRAV12-1A0A0B4J245 112 aa0.8□□□□□ -2.28
SMC4-205ENST00000465563 GEMIN2O14893 280 aaKnown RBP0.8□□□□□ -2.28
SMC4-205ENST00000465563 OR7C1O76099 320 aaPredicted RBP0.8□□□□□ -2.28
SMC4-205ENST00000465563 UBL3O95164 117 aa0.8□□□□□ -2.28
SMC4-205ENST00000465563 BRS3P32247 399 aa0.8□□□□□ -2.28
SMC4-205ENST00000465563 YPEL3P61236 119 aaPredicted RBP0.8□□□□□ -2.28
SMC4-205ENST00000465563 CNBPP62633 177 aaKnown RBP0.8□□□□□ -2.28
SMC4-205ENST00000465563 TRAPPC6BQ86SZ2 158 aa0.8□□□□□ -2.28
SMC4-205ENST00000465563 FAM19A2Q8N3H0 131 aa0.8□□□□□ -2.28
SMC4-205ENST00000465563 LINC00471Q8N535 108 aa0.8□□□□□ -2.28
SMC4-205ENST00000465563 SLC25A40Q8TBP6 338 aa0.8□□□□□ -2.28
SMC4-205ENST00000465563 GPR146Q96CH1 333 aa0.8□□□□□ -2.28
SMC4-205ENST00000465563 PARVBQ9HBI1 364 aa0.8□□□□□ -2.28
SMC4-205ENST00000465563 C22orf24Q9Y442 160 aa0.8□□□□□ -2.28
SMC4-205ENST00000465563 SNURFQ9Y675 71 aa0.8□□□□□ -2.28
SMC4-205ENST00000465563 RTL1A6NKG5 1358 aa0.8□□□□□ -2.28
SMC4-205ENST00000465563 UNC13CQ8NB66 2214 aa0.8□□□□□ -2.28
SMC4-205ENST00000465563 AHNAKQ09666 5890 aaKnown RBP0.8□□□□□ -2.28
SMC4-205ENST00000465563 ALPK3Q96L96 1907 aa0.79□□□□□ -2.28
SMC4-205ENST00000465563 A0A087WX48 190 aa0.79□□□□□ -2.28
SMC4-205ENST00000465563 A0A087X0T9 212 aa0.79□□□□□ -2.28
SMC4-205ENST00000465563 M0R2N4 97 aa0.79□□□□□ -2.28
SMC4-205ENST00000465563 S100A4P26447 101 aaKnown RBP0.79□□□□□ -2.28
SMC4-205ENST00000465563 CASP1P29466 404 aa0.79□□□□□ -2.28
SMC4-205ENST00000465563 RNASE4P34096 147 aaKnown RBP0.79□□□□□ -2.28
SMC4-205ENST00000465563 RAB4BP61018 213 aa0.79□□□□□ -2.28
SMC4-205ENST00000465563 RHOGP84095 191 aa0.79□□□□□ -2.28
SMC4-205ENST00000465563 DEFB113Q30KQ7 82 aa0.79□□□□□ -2.28
SMC4-205ENST00000465563 RNASE10Q5GAN6 216 aaKnown RBP0.79□□□□□ -2.28
SMC4-205ENST00000465563 C3orf56Q8N813 242 aa0.79□□□□□ -2.28
SMC4-205ENST00000465563 ZNF418Q8TF45 676 aaPredicted RBP0.79□□□□□ -2.28
SMC4-205ENST00000465563 TVP23BQ9NYZ1 205 aa0.79□□□□□ -2.28
SMC4-205ENST00000465563 MYH2Q9UKX2 1941 aa0.78□□□□□ -2.28
SMC4-205ENST00000465563 FBN2P35556 2912 aa0.78□□□□□ -2.28
SMC4-205ENST00000465563 IGKV2D-26A0A0A0MRZ7 120 aa0.78□□□□□ -2.28
SMC4-205ENST00000465563 TRAV4A0A0B4J268 109 aa0.78□□□□□ -2.28
SMC4-205ENST00000465563 FAM159BA6NKW6 160 aa0.78□□□□□ -2.28
SMC4-205ENST00000465563 CST2P09228 141 aa0.78□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms