RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 TMEM170AQ8WVE7 144 aa7.54□□□□□ -1.2
SF3A3-204ENST00000462258 METTL26Q96S19 204 aa7.54□□□□□ -1.2
SF3A3-204ENST00000462258 OVOL2Q9BRP0 275 aa7.54□□□□□ -1.2
SF3A3-204ENST00000462258 MAP6D1Q9H9H5 199 aa7.54□□□□□ -1.2
SF3A3-204ENST00000462258 HSPB7Q9UBY9 170 aa7.54□□□□□ -1.2
SF3A3-204ENST00000462258 TENM2Q9NT68 2774 aa7.54□□□□□ -1.2
SF3A3-204ENST00000462258 TRAV30A0A087WSZ9 112 aa7.53□□□□□ -1.2
SF3A3-204ENST00000462258 KIR2DL5BA0A0G2JN68 375 aa7.53□□□□□ -1.2
SF3A3-204ENST00000462258 KIR2DL5BA0A0G2JPC4 375 aa7.53□□□□□ -1.2
SF3A3-204ENST00000462258 DUXBA0A1W2PPF3 345 aa7.53□□□□□ -1.2
SF3A3-204ENST00000462258 DFFBO76075 338 aa7.53□□□□□ -1.2
SF3A3-204ENST00000462258 IGLC1P0CG04 106 aa7.53□□□□□ -1.2
SF3A3-204ENST00000462258 RPL35AP18077 110 aaKnown RBP7.53□□□□□ -1.2
SF3A3-204ENST00000462258 OR10J1P30954 320 aa7.53□□□□□ -1.2
SF3A3-204ENST00000462258 PAFAH1B2P68402 229 aa7.53□□□□□ -1.2
SF3A3-204ENST00000462258 ZNF124Q15973 351 aa7.53□□□□□ -1.2
SF3A3-204ENST00000462258 MLANAQ16655 118 aa7.53□□□□□ -1.2
SF3A3-204ENST00000462258 TMEM128Q5BJH2 165 aa7.53□□□□□ -1.2
SF3A3-204ENST00000462258 ETFRF1Q6IPR1 90 aa7.53□□□□□ -1.2
SF3A3-204ENST00000462258 NOXA1Q86UR1 476 aa7.53□□□□□ -1.2
SF3A3-204ENST00000462258 KIR2DL5AQ8N109 375 aa7.53□□□□□ -1.2
SF3A3-204ENST00000462258 OR1S1Q8NH92 325 aa7.53□□□□□ -1.2
SF3A3-204ENST00000462258 KIR2DL5BQ8NHK3 375 aa7.53□□□□□ -1.2
SF3A3-204ENST00000462258 NARS2Q96I59 477 aaKnown RBP7.53□□□□□ -1.2
SF3A3-204ENST00000462258 SLC25A21Q9BQT8 299 aaPredicted RBP7.53□□□□□ -1.2
SF3A3-204ENST00000462258 SRRQ9GZT4 340 aa7.53□□□□□ -1.2
SF3A3-204ENST00000462258 MS4A6AQ9H2W1 248 aa7.53□□□□□ -1.2
SF3A3-204ENST00000462258 RBKSQ9H477 322 aa7.53□□□□□ -1.2
SF3A3-204ENST00000462258 HYDINQ4G0P3 5121 aa7.53□□□□□ -1.2
SF3A3-204ENST00000462258 A0A1W2PS18 150 aa7.52□□□□□ -1.21
SF3A3-204ENST00000462258 UBE2CO00762 179 aa7.52□□□□□ -1.21
SF3A3-204ENST00000462258 IFNA10P01566 189 aa7.52□□□□□ -1.21
SF3A3-204ENST00000462258 NPPCP23582 126 aa7.52□□□□□ -1.21
SF3A3-204ENST00000462258 P2RY1P47900 373 aa7.52□□□□□ -1.21
SF3A3-204ENST00000462258 CMC4P56277 68 aaPredicted RBP7.52□□□□□ -1.21
SF3A3-204ENST00000462258 RPL11P62913 178 aaKnown RBP7.52□□□□□ -1.21
SF3A3-204ENST00000462258 PPP1R1AQ13522 171 aa7.52□□□□□ -1.21
SF3A3-204ENST00000462258 RBMS2Q15434 407 aaKnown RBP7.52□□□□□ -1.21
SF3A3-204ENST00000462258 TRIQKQ629K1 86 aa7.52□□□□□ -1.21
SF3A3-204ENST00000462258 Q6ZWC4 215 aa7.52□□□□□ -1.21
SF3A3-204ENST00000462258 WFDC3Q8IUB2 231 aa7.52□□□□□ -1.21
SF3A3-204ENST00000462258 CENPSQ8N2Z9 138 aa7.52□□□□□ -1.21
SF3A3-204ENST00000462258 LILRB2Q8N423 598 aa7.52□□□□□ -1.21
SF3A3-204ENST00000462258 STPG3Q8N7X2 389 aa7.52□□□□□ -1.21
SF3A3-204ENST00000462258 IL17DQ8TAD2 202 aa7.52□□□□□ -1.21
SF3A3-204ENST00000462258 ACY3Q96HD9 319 aa7.52□□□□□ -1.21
SF3A3-204ENST00000462258 TP53TG1Q9Y2A0 90 aa7.52□□□□□ -1.21
SF3A3-204ENST00000462258 TRAV2A0A0B4J234 112 aa7.51□□□□□ -1.21
SF3A3-204ENST00000462258 LCE6AA0A183 80 aa7.51□□□□□ -1.21
SF3A3-204ENST00000462258 DNASE2O00115 360 aaPredicted RBP7.51□□□□□ -1.21
SF3A3-204ENST00000462258 SPRY2O43597 315 aa7.51□□□□□ -1.21
SF3A3-204ENST00000462258 SFT2D2O95562 160 aa7.51□□□□□ -1.21
SF3A3-204ENST00000462258 IL4P05112 153 aa7.51□□□□□ -1.21
SF3A3-204ENST00000462258 CRYBB3P26998 211 aa7.51□□□□□ -1.21
SF3A3-204ENST00000462258 INPP1P49441 399 aa7.51□□□□□ -1.21
SF3A3-204ENST00000462258 LRTM2Q8N967 370 aa7.51□□□□□ -1.21
SF3A3-204ENST00000462258 STXBP6Q8NFX7 210 aa7.51□□□□□ -1.21
SF3A3-204ENST00000462258 Q8WTZ3 238 aa7.51□□□□□ -1.21
SF3A3-204ENST00000462258 GRAMD2BQ96HH9 432 aa7.51□□□□□ -1.21
SF3A3-204ENST00000462258 RABAC1Q9UI14 185 aa7.51□□□□□ -1.21
SF3A3-204ENST00000462258 U3KQ87 197 aa7.51□□□□□ -1.21
SF3A3-204ENST00000462258 A0A0J9YWU9 116 aa7.5□□□□□ -1.21
SF3A3-204ENST00000462258 PITX3O75364 302 aa7.5□□□□□ -1.21
SF3A3-204ENST00000462258 TOMM40O96008 361 aa7.5□□□□□ -1.21
SF3A3-204ENST00000462258 IFNA4P05014 189 aa7.5□□□□□ -1.21
SF3A3-204ENST00000462258 HNRNPCP07910 306 aaKnown RBP eCLIP7.5□□□□□ -1.21
SF3A3-204ENST00000462258 IAPPP10997 89 aa7.5□□□□□ -1.21
SF3A3-204ENST00000462258 DEFB131AP59861 70 aa7.5□□□□□ -1.21
SF3A3-204ENST00000462258 UBE2MP61081 183 aaKnown RBP7.5□□□□□ -1.21
SF3A3-204ENST00000462258 YPEL3P61236 119 aaPredicted RBP7.5□□□□□ -1.21
SF3A3-204ENST00000462258 USF2Q15853 346 aaPredicted RBP7.5□□□□□ -1.21
SF3A3-204ENST00000462258 LEMD1Q68G75 181 aa7.5□□□□□ -1.21
SF3A3-204ENST00000462258 LYG2Q86SG7 212 aa7.5□□□□□ -1.21
SF3A3-204ENST00000462258 FAM24BQ8N5W8 94 aa7.5□□□□□ -1.21
SF3A3-204ENST00000462258 NPIPB3Q92617 1050 aa7.5□□□□□ -1.21
SF3A3-204ENST00000462258 RNF183Q96D59 192 aa7.5□□□□□ -1.21
SF3A3-204ENST00000462258 SLC35E1Q96K37 410 aa7.5□□□□□ -1.21
SF3A3-204ENST00000462258 TMED3Q9Y3Q3 217 aa7.5□□□□□ -1.21
SF3A3-204ENST00000462258 HELTA6NFD8 242 aa7.49□□□□□ -1.21
SF3A3-204ENST00000462258 NAP1L6A6NFF2 107 aa7.49□□□□□ -1.21
SF3A3-204ENST00000462258 MPTX1A8MV57 137 aa7.49□□□□□ -1.21
SF3A3-204ENST00000462258 FAM90A26D6RGX4 464 aa7.49□□□□□ -1.21
SF3A3-204ENST00000462258 K7EQG2 157 aa7.49□□□□□ -1.21
SF3A3-204ENST00000462258 SLC25A6P12236 298 aa7.49□□□□□ -1.21
SF3A3-204ENST00000462258 EIF2B2P49770 351 aaKnown RBP7.49□□□□□ -1.21
SF3A3-204ENST00000462258 ATP5IP56385 69 aaPredicted RBP7.49□□□□□ -1.21
SF3A3-204ENST00000462258 BAK1Q16611 211 aa7.49□□□□□ -1.21
SF3A3-204ENST00000462258 GLMPQ8WWB7 406 aa7.49□□□□□ -1.21
SF3A3-204ENST00000462258 U3KQE9 123 aa7.49□□□□□ -1.21
SF3A3-204ENST00000462258 LINC00854A0A1B0GVQ3 168 aa7.48□□□□□ -1.21
SF3A3-204ENST00000462258 ZFP92A6NM28 416 aa7.48□□□□□ -1.21
SF3A3-204ENST00000462258 MED6O75586 246 aa7.48□□□□□ -1.21
SF3A3-204ENST00000462258 JTBO76095 146 aa7.48□□□□□ -1.21
SF3A3-204ENST00000462258 NDUFB6O95139 128 aa7.48□□□□□ -1.21
SF3A3-204ENST00000462258 CA1P00915 261 aaPredicted RBP7.48□□□□□ -1.21
SF3A3-204ENST00000462258 HOXB5P09067 269 aa7.48□□□□□ -1.21
SF3A3-204ENST00000462258 ZNF688P0C7X2 276 aa7.48□□□□□ -1.21
SF3A3-204ENST00000462258 RD3LP0DJH9 198 aa7.48□□□□□ -1.21
SF3A3-204ENST00000462258 PSG1P11464 419 aa7.48□□□□□ -1.21
SF3A3-204ENST00000462258 RAB11AP62491 216 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms