RNA–Protein interactions for RNA: ENST00000458748.1

SCARNA2-201, small Cajal body-specific RNA 2, humanhuman

BASIC

Gene SCARNA2, Length 420 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA2-201ENST00000458748 PRSS54Q6PEW0 395 aa13.08□□□□□ -0.32
SCARNA2-201ENST00000458748 GRAMD2BQ96HH9 432 aa13.08□□□□□ -0.32
SCARNA2-201ENST00000458748 CIB3Q96Q77 187 aaPredicted RBP13.08□□□□□ -0.32
SCARNA2-201ENST00000458748 VSIRQ9H7M9 311 aa13.08□□□□□ -0.32
SCARNA2-201ENST00000458748 ZFAND3Q9H8U3 227 aa13.08□□□□□ -0.32
SCARNA2-201ENST00000458748 IGHV3-49A0A0A0MS15 119 aa13.07□□□□□ -0.32
SCARNA2-201ENST00000458748 DNASE2O00115 360 aaPredicted RBP13.07□□□□□ -0.32
SCARNA2-201ENST00000458748 LYL1P12980 280 aa13.07□□□□□ -0.32
SCARNA2-201ENST00000458748 YPEL3P61236 119 aaPredicted RBP13.07□□□□□ -0.32
SCARNA2-201ENST00000458748 RAB11AP62491 216 aa13.07□□□□□ -0.32
SCARNA2-201ENST00000458748 RPL11P62913 178 aaKnown RBP13.07□□□□□ -0.32
SCARNA2-201ENST00000458748 MLANAQ16655 118 aa13.07□□□□□ -0.32
SCARNA2-201ENST00000458748 TCF24Q7RTU0 167 aa13.07□□□□□ -0.32
SCARNA2-201ENST00000458748 COQ8AQ8NI60 647 aa13.07□□□□□ -0.32
SCARNA2-201ENST00000458748 FABP1P07148 127 aa13.06□□□□□ -0.32
SCARNA2-201ENST00000458748 TIGITQ495A1 244 aa13.06□□□□□ -0.32
SCARNA2-201ENST00000458748 CASC10Q5T4H9 136 aa13.06□□□□□ -0.32
SCARNA2-201ENST00000458748 IL17DQ8TAD2 202 aa13.06□□□□□ -0.32
SCARNA2-201ENST00000458748 EDA2RQ9HAV5 297 aa13.06□□□□□ -0.32
SCARNA2-201ENST00000458748 UBQLN2Q9UHD9 624 aa13.06□□□□□ -0.32
SCARNA2-201ENST00000458748 IGHV3OR16-13A0A075B7E8 117 aa13.05□□□□□ -0.32
SCARNA2-201ENST00000458748 IGHV3-74A0A0B4J1X5 117 aa13.05□□□□□ -0.32
SCARNA2-201ENST00000458748 TRAV2A0A0B4J234 112 aa13.05□□□□□ -0.32
SCARNA2-201ENST00000458748 LINC00854A0A1B0GVQ3 168 aa13.05□□□□□ -0.32
SCARNA2-201ENST00000458748 UBE2CO00762 179 aa13.05□□□□□ -0.32
SCARNA2-201ENST00000458748 PITX3O75364 302 aa13.05□□□□□ -0.32
SCARNA2-201ENST00000458748 IFNA21P01568 189 aa13.05□□□□□ -0.32
SCARNA2-201ENST00000458748 IGKV1-17P01599 117 aa13.05□□□□□ -0.32
SCARNA2-201ENST00000458748 IGLC1P0CG04 106 aa13.05□□□□□ -0.32
SCARNA2-201ENST00000458748 IL7P13232 177 aa13.05□□□□□ -0.32
SCARNA2-201ENST00000458748 GPX4P36969 197 aaPredicted RBP13.05□□□□□ -0.32
SCARNA2-201ENST00000458748 ST8SIA2Q92186 375 aa13.05□□□□□ -0.32
SCARNA2-201ENST00000458748 ACY3Q96HD9 319 aa13.05□□□□□ -0.32
SCARNA2-201ENST00000458748 ZNF414Q96IQ9 312 aa13.05□□□□□ -0.32
SCARNA2-201ENST00000458748 SLC35E1Q96K37 410 aa13.05□□□□□ -0.32
SCARNA2-201ENST00000458748 MRPL36Q9P0J6 103 aaKnown RBP13.05□□□□□ -0.32
SCARNA2-201ENST00000458748 PFDN2Q9UHV9 154 aa13.05□□□□□ -0.32
SCARNA2-201ENST00000458748 IGKV3-7A0A075B6H7 116 aa13.04□□□□□ -0.32
SCARNA2-201ENST00000458748 C9orf170A2RU37 121 aa13.04□□□□□ -0.32
SCARNA2-201ENST00000458748 HOXB5P09067 269 aa13.04□□□□□ -0.32
SCARNA2-201ENST00000458748 RD3LP0DJH9 198 aa13.04□□□□□ -0.32
SCARNA2-201ENST00000458748 CRYBB3P26998 211 aa13.04□□□□□ -0.32
SCARNA2-201ENST00000458748 TFPI2P48307 235 aa13.04□□□□□ -0.32
SCARNA2-201ENST00000458748 ODF3L2Q3SX64 289 aa13.04□□□□□ -0.32
SCARNA2-201ENST00000458748 C4orf46Q504U0 113 aa13.04□□□□□ -0.32
SCARNA2-201ENST00000458748 FAM90A2PQ658T7 463 aa13.04□□□□□ -0.32
SCARNA2-201ENST00000458748 LINC00299Q6ZSB3 139 aa13.04□□□□□ -0.32
SCARNA2-201ENST00000458748 STPG3Q8N7X2 389 aa13.04□□□□□ -0.32
SCARNA2-201ENST00000458748 NPIPB3Q92617 1050 aa13.04□□□□□ -0.32
SCARNA2-201ENST00000458748 KIR2DL5BA0A0G2JN68 375 aa13.03□□□□□ -0.32
SCARNA2-201ENST00000458748 KIR2DL5BA0A0G2JPC4 375 aa13.03□□□□□ -0.32
SCARNA2-201ENST00000458748 HELTA6NFD8 242 aa13.03□□□□□ -0.32
SCARNA2-201ENST00000458748 SYNGR2O43760 224 aa13.03□□□□□ -0.32
SCARNA2-201ENST00000458748 DFFBO76075 338 aa13.03□□□□□ -0.32
SCARNA2-201ENST00000458748 NUP62P37198 522 aaPredicted RBP13.03□□□□□ -0.32
SCARNA2-201ENST00000458748 AP2S1P53680 142 aaPredicted RBP13.03□□□□□ -0.32
SCARNA2-201ENST00000458748 GGNBP1Q5YKI7 109 aa13.03□□□□□ -0.32
SCARNA2-201ENST00000458748 KIR2DL5AQ8N109 375 aa13.03□□□□□ -0.32
SCARNA2-201ENST00000458748 GBGT1Q8N5D6 347 aa13.03□□□□□ -0.32
SCARNA2-201ENST00000458748 KIR2DL5BQ8NHK3 375 aa13.03□□□□□ -0.32
SCARNA2-201ENST00000458748 TMEM170AQ8WVE7 144 aa13.03□□□□□ -0.32
SCARNA2-201ENST00000458748 PAIP2BQ9ULR5 123 aaKnown RBP13.03□□□□□ -0.32
SCARNA2-201ENST00000458748 TENM2Q9NT68 2774 aa13.02□□□□□ -0.32
SCARNA2-201ENST00000458748 IGHV3-66A0A0C4DH42 116 aa13.02□□□□□ -0.33
SCARNA2-201ENST00000458748 ZFP92A6NM28 416 aa13.02□□□□□ -0.33
SCARNA2-201ENST00000458748 TOMM40O96008 361 aa13.02□□□□□ -0.33
SCARNA2-201ENST00000458748 APOHP02749 345 aaPredicted RBP13.02□□□□□ -0.33
SCARNA2-201ENST00000458748 HNRNPCP07910 306 aaKnown RBP eCLIP13.02□□□□□ -0.33
SCARNA2-201ENST00000458748 OR4E1P0C645 316 aa13.02□□□□□ -0.33
SCARNA2-201ENST00000458748 P2RY1P47900 373 aa13.02□□□□□ -0.33
SCARNA2-201ENST00000458748 Q6ZWC4 215 aa13.02□□□□□ -0.33
SCARNA2-201ENST00000458748 LYG2Q86SG7 212 aa13.02□□□□□ -0.33
SCARNA2-201ENST00000458748 SDHCQ99643 169 aaPredicted RBP13.02□□□□□ -0.33
SCARNA2-201ENST00000458748 MS4A6AQ9H2W1 248 aa13.02□□□□□ -0.33
SCARNA2-201ENST00000458748 RETNQ9HD89 108 aa13.02□□□□□ -0.33
SCARNA2-201ENST00000458748 RABAC1Q9UI14 185 aa13.02□□□□□ -0.33
SCARNA2-201ENST00000458748 WRBO00258 174 aa13.01□□□□□ -0.33
SCARNA2-201ENST00000458748 IL4P05112 153 aa13.01□□□□□ -0.33
SCARNA2-201ENST00000458748 IAPPP10997 89 aa13.01□□□□□ -0.33
SCARNA2-201ENST00000458748 DHRS2Q13268 280 aa13.01□□□□□ -0.33
SCARNA2-201ENST00000458748 S100ZQ8WXG8 99 aa13.01□□□□□ -0.33
SCARNA2-201ENST00000458748 CCDC32Q9BV29 185 aa13.01□□□□□ -0.33
SCARNA2-201ENST00000458748 TP53TG1Q9Y2A0 90 aa13.01□□□□□ -0.33
SCARNA2-201ENST00000458748 LYRM1O43325 122 aa13□□□□□ -0.33
SCARNA2-201ENST00000458748 ZFAND6Q6FIF0 208 aa13□□□□□ -0.33
SCARNA2-201ENST00000458748 WFDC3Q8IUB2 231 aa13□□□□□ -0.33
SCARNA2-201ENST00000458748 OR51G1Q8NGK1 321 aa13□□□□□ -0.33
SCARNA2-201ENST00000458748 MAP6D1Q9H9H5 199 aa13□□□□□ -0.33
SCARNA2-201ENST00000458748 FLVCR2Q9UPI3 526 aa13□□□□□ -0.33
SCARNA2-201ENST00000458748 GAMTQ14353 236 aa12.99□□□□□ -0.33
SCARNA2-201ENST00000458748 APRG1Q8IVJ8 170 aa12.99□□□□□ -0.33
SCARNA2-201ENST00000458748 STXBP6Q8NFX7 210 aa12.99□□□□□ -0.33
SCARNA2-201ENST00000458748 MAGT1Q9H0U3 335 aa12.99□□□□□ -0.33
SCARNA2-201ENST00000458748 STRAPQ9Y3F4 350 aaKnown RBP12.99□□□□□ -0.33
SCARNA2-201ENST00000458748 DNAH7Q8WXX0 4024 aa12.99□□□□□ -0.33
SCARNA2-201ENST00000458748 SPRY2O43597 315 aa12.98□□□□□ -0.33
SCARNA2-201ENST00000458748 CFDP00746 253 aaPredicted RBP12.98□□□□□ -0.33
SCARNA2-201ENST00000458748 PSG1P11464 419 aa12.98□□□□□ -0.33
SCARNA2-201ENST00000458748 RPL35AP18077 110 aaKnown RBP12.98□□□□□ -0.33
SCARNA2-201ENST00000458748 ANXA7P20073 488 aaKnown RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms