RNA–Protein interactions for RNA: ENST00000454323.1

CUL3-208, Transcript of cullin 3, humanhuman

TSL 3

Gene CUL3, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-208ENST00000454323 LYZL2Q7Z4W2 148 aa2.78□□□□□ -1.96
CUL3-208ENST00000454323 RNF182Q8N6D2 247 aa2.78□□□□□ -1.96
CUL3-208ENST00000454323 SLC35B4Q969S0 331 aa2.78□□□□□ -1.96
CUL3-208ENST00000454323 MS4A6EQ96DS6 147 aa2.78□□□□□ -1.96
CUL3-208ENST00000454323 TBX5Q99593 518 aa2.78□□□□□ -1.96
CUL3-208ENST00000454323 TMEM109Q9BVC6 243 aa2.78□□□□□ -1.96
CUL3-208ENST00000454323 WASHC3Q9Y3C0 194 aa2.78□□□□□ -1.96
CUL3-208ENST00000454323 MDC1Q14676 2089 aaKnown RBP2.78□□□□□ -1.96
CUL3-208ENST00000454323 MYH10P35580 1976 aa2.78□□□□□ -1.97
CUL3-208ENST00000454323 SVEP1Q4LDE5 3571 aa2.77□□□□□ -1.97
CUL3-208ENST00000454323 TMED7-TICAM2A0A0A6YYA0 188 aa2.77□□□□□ -1.97
CUL3-208ENST00000454323 A0A1B0GX78 115 aa2.77□□□□□ -1.97
CUL3-208ENST00000454323 CLDN24A6NM45 220 aa2.77□□□□□ -1.97
CUL3-208ENST00000454323 DISC1C4P0D8 188 aa2.77□□□□□ -1.97
CUL3-208ENST00000454323 UBFD1O14562 309 aaKnown RBP2.77□□□□□ -1.97
CUL3-208ENST00000454323 EEF1E1O43324 174 aaKnown RBP2.77□□□□□ -1.97
CUL3-208ENST00000454323 FADS1O60427 444 aa2.77□□□□□ -1.97
CUL3-208ENST00000454323 CD7P09564 240 aa2.77□□□□□ -1.97
CUL3-208ENST00000454323 OR5G3P0C626 314 aa2.77□□□□□ -1.97
CUL3-208ENST00000454323 CRABP2P29373 138 aa2.77□□□□□ -1.97
CUL3-208ENST00000454323 CASP1P29466 404 aa2.77□□□□□ -1.97
CUL3-208ENST00000454323 KLF3P57682 345 aaPredicted RBP2.77□□□□□ -1.97
CUL3-208ENST00000454323 PRDX4Q13162 271 aa2.77□□□□□ -1.97
CUL3-208ENST00000454323 DHRS2Q13268 280 aa2.77□□□□□ -1.97
CUL3-208ENST00000454323 BIKQ13323 160 aa2.77□□□□□ -1.97
CUL3-208ENST00000454323 BATFQ16520 125 aa2.77□□□□□ -1.97
CUL3-208ENST00000454323 AKIRIN2Q53H80 203 aa2.77□□□□□ -1.97
CUL3-208ENST00000454323 C1orf174Q8IYL3 243 aa2.77□□□□□ -1.97
CUL3-208ENST00000454323 LRRC25Q8N386 305 aaPredicted RBP2.77□□□□□ -1.97
CUL3-208ENST00000454323 DEFB125Q8N687 156 aa2.77□□□□□ -1.97
CUL3-208ENST00000454323 CLDN22Q8N7P3 220 aa2.77□□□□□ -1.97
CUL3-208ENST00000454323 LY6G5BQ8NDX9 201 aa2.77□□□□□ -1.97
CUL3-208ENST00000454323 OR4E2Q8NGC2 313 aa2.77□□□□□ -1.97
CUL3-208ENST00000454323 HIST1H2BAQ96A08 127 aa2.77□□□□□ -1.97
CUL3-208ENST00000454323 RMI2Q96E14 147 aa2.77□□□□□ -1.97
CUL3-208ENST00000454323 DIRAS2Q96HU8 199 aa2.77□□□□□ -1.97
CUL3-208ENST00000454323 ZNF2Q9BSG1 426 aaPredicted RBP2.77□□□□□ -1.97
CUL3-208ENST00000454323 C1QTNF6Q9BXI9 259 aa2.77□□□□□ -1.97
CUL3-208ENST00000454323 RSPO3Q9BXY4 272 aaPredicted RBP2.77□□□□□ -1.97
CUL3-208ENST00000454323 TAS2R1Q9NYW7 299 aa2.77□□□□□ -1.97
CUL3-208ENST00000454323 VPS29Q9UBQ0 182 aa2.77□□□□□ -1.97
CUL3-208ENST00000454323 MARCOQ9UEW3 520 aaPredicted RBP2.77□□□□□ -1.97
CUL3-208ENST00000454323 CARHSP1Q9Y2V2 147 aaKnown RBP2.77□□□□□ -1.97
CUL3-208ENST00000454323 FAM215AQ9Y5M1 114 aa2.77□□□□□ -1.97
CUL3-208ENST00000454323 CHD3Q12873 2000 aaKnown RBP2.76□□□□□ -1.97
CUL3-208ENST00000454323 SMIM9A6NGZ8 99 aa2.76□□□□□ -1.97
CUL3-208ENST00000454323 EEF1E1-BLOC1S5C9J1V9 151 aa2.76□□□□□ -1.97
CUL3-208ENST00000454323 CHP2O43745 196 aa2.76□□□□□ -1.97
CUL3-208ENST00000454323 NSA2O95478 260 aaKnown RBP2.76□□□□□ -1.97
CUL3-208ENST00000454323 PRPS1L1P21108 318 aa2.76□□□□□ -1.97
CUL3-208ENST00000454323 MAP2K4P45985 399 aa2.76□□□□□ -1.97
CUL3-208ENST00000454323 FOXA1P55317 472 aa2.76□□□□□ -1.97
CUL3-208ENST00000454323 TMEM33P57088 247 aa2.76□□□□□ -1.97
CUL3-208ENST00000454323 SPCS3P61009 180 aa2.76□□□□□ -1.97
CUL3-208ENST00000454323 AP1S1P61966 158 aa2.76□□□□□ -1.97
CUL3-208ENST00000454323 SPIN3Q5JUX0 258 aa2.76□□□□□ -1.97
CUL3-208ENST00000454323 ZNF660Q6AZW8 331 aaPredicted RBP2.76□□□□□ -1.97
CUL3-208ENST00000454323 OR51D1Q8NGF3 324 aa2.76□□□□□ -1.97
CUL3-208ENST00000454323 CPNE2Q96FN4 548 aaPredicted RBP2.76□□□□□ -1.97
CUL3-208ENST00000454323 UPK3BQ9BT76 320 aa2.76□□□□□ -1.97
CUL3-208ENST00000454323 PECRQ9BY49 303 aa2.76□□□□□ -1.97
CUL3-208ENST00000454323 LCE3DQ9BYE3 92 aa2.76□□□□□ -1.97
CUL3-208ENST00000454323 TLNRD1Q9H1K6 362 aa2.76□□□□□ -1.97
CUL3-208ENST00000454323 CHD5Q8TDI0 1954 aa2.76□□□□□ -1.97
CUL3-208ENST00000454323 SEC16AO15027 2179 aa2.76□□□□□ -1.97
CUL3-208ENST00000454323 ZANQ9Y493 2812 aa2.75□□□□□ -1.97
CUL3-208ENST00000454323 USF3Q68DE3 2245 aa2.75□□□□□ -1.97
CUL3-208ENST00000454323 DEFB108AA8MXU0 73 aa2.75□□□□□ -1.97
CUL3-208ENST00000454323 H3BQV1 296 aa2.75□□□□□ -1.97
CUL3-208ENST00000454323 GSTZ1O43708 216 aaPredicted RBP2.75□□□□□ -1.97
CUL3-208ENST00000454323 SLC25A20O43772 301 aa2.75□□□□□ -1.97
CUL3-208ENST00000454323 APOMO95445 188 aa2.75□□□□□ -1.97
CUL3-208ENST00000454323 IGHV3-30-3P0DP02 117 aa2.75□□□□□ -1.97
CUL3-208ENST00000454323 PPP1CCP36873 323 aaKnown RBP2.75□□□□□ -1.97
CUL3-208ENST00000454323 GABRA4P48169 554 aa2.75□□□□□ -1.97
CUL3-208ENST00000454323 AKR1C2P52895 323 aa2.75□□□□□ -1.97
CUL3-208ENST00000454323 OR4D2P58180 307 aa2.75□□□□□ -1.97
CUL3-208ENST00000454323 MRPS25P82663 173 aaKnown RBP2.75□□□□□ -1.97
CUL3-208ENST00000454323 LY6EQ16553 131 aa2.75□□□□□ -1.97
CUL3-208ENST00000454323 PLPPR5Q32ZL2 321 aa2.75□□□□□ -1.97
CUL3-208ENST00000454323 BAP18Q8IXM2 172 aa2.75□□□□□ -1.97
CUL3-208ENST00000454323 ZNF680Q8NEM1 530 aa2.75□□□□□ -1.97
CUL3-208ENST00000454323 OR1L8Q8NGR8 309 aa2.75□□□□□ -1.97
CUL3-208ENST00000454323 LCN9Q8WX39 176 aa2.75□□□□□ -1.97
CUL3-208ENST00000454323 ANAPC10Q9UM13 185 aa2.75□□□□□ -1.97
CUL3-208ENST00000454323 HHLA2Q9UM44 414 aa2.75□□□□□ -1.97
CUL3-208ENST00000454323 NYNRINQ9P2P1 1898 aaKnown RBP2.75□□□□□ -1.97
CUL3-208ENST00000454323 ABCA1O95477 2261 aa2.74□□□□□ -1.97
CUL3-208ENST00000454323 A0A1W2PQ67 120 aa2.74□□□□□ -1.97
CUL3-208ENST00000454323 C15orf65H3BRN8 121 aa2.74□□□□□ -1.97
CUL3-208ENST00000454323 IGHMP01871 453 aa2.74□□□□□ -1.97
CUL3-208ENST00000454323 SPINT3P49223 89 aa2.74□□□□□ -1.97
CUL3-208ENST00000454323 CDK9P50750 372 aaKnown RBP2.74□□□□□ -1.97
CUL3-208ENST00000454323 MAXP61244 160 aa2.74□□□□□ -1.97
CUL3-208ENST00000454323 MRPL51Q4U2R6 128 aaKnown RBP2.74□□□□□ -1.97
CUL3-208ENST00000454323 FAM201AQ5SY85 155 aa2.74□□□□□ -1.97
CUL3-208ENST00000454323 HIST2H3PS2Q5TEC6 136 aa2.74□□□□□ -1.97
CUL3-208ENST00000454323 HIST2H3AQ71DI3 136 aa2.74□□□□□ -1.97
CUL3-208ENST00000454323 UMODL1-AS1Q8N2C9 162 aa2.74□□□□□ -1.97
CUL3-208ENST00000454323 Q8NAQ8 132 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms