RNA–Protein interactions for RNA: ENST00000443896.5

PIKFYVE-206, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 1 (best)

Gene PIKFYVE, Length 3,282 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-206ENST00000443896 C2orf83Q53S99 150 aa13.17□□□□□ -0.3
PIKFYVE-206ENST00000443896 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.16□□□□□ -0.3
PIKFYVE-206ENST00000443896 B9A039 149 aa13.16□□□□□ -0.3
PIKFYVE-206ENST00000443896 CD3EP07766 207 aa13.16□□□□□ -0.3
PIKFYVE-206ENST00000443896 PRR20EP86478 221 aa13.16□□□□□ -0.3
PIKFYVE-206ENST00000443896 PRR20CP86479 221 aa13.16□□□□□ -0.3
PIKFYVE-206ENST00000443896 PRR20DP86480 221 aa13.16□□□□□ -0.3
PIKFYVE-206ENST00000443896 PRR20BP86481 221 aa13.16□□□□□ -0.3
PIKFYVE-206ENST00000443896 PRR20AP86496 221 aa13.16□□□□□ -0.3
PIKFYVE-206ENST00000443896 OR10X1Q8NGY0 326 aa13.16□□□□□ -0.3
PIKFYVE-206ENST00000443896 TMEM186Q96B77 213 aa13.16□□□□□ -0.3
PIKFYVE-206ENST00000443896 TXNDC17Q9BRA2 123 aa13.16□□□□□ -0.3
PIKFYVE-206ENST00000443896 IGHV1-69-2A0A0G2JMI3 117 aa13.16□□□□□ -0.3
PIKFYVE-206ENST00000443896 GNB1P62873 340 aa13.16□□□□□ -0.3
PIKFYVE-206ENST00000443896 TMEM155Q4W5P6 130 aa13.16□□□□□ -0.3
PIKFYVE-206ENST00000443896 COL25A1Q9BXS0 654 aaPredicted RBP13.16□□□□□ -0.3
PIKFYVE-206ENST00000443896 SNURFLB1AK76 121 aa13.15□□□□□ -0.3
PIKFYVE-206ENST00000443896 IGFBP2P18065 325 aa13.15□□□□□ -0.3
PIKFYVE-206ENST00000443896 REG1BP48304 166 aa13.15□□□□□ -0.3
PIKFYVE-206ENST00000443896 PRR27Q6MZM9 219 aa13.15□□□□□ -0.3
PIKFYVE-206ENST00000443896 OR1L8Q8NGR8 309 aa13.15□□□□□ -0.3
PIKFYVE-206ENST00000443896 FLYWCH2Q96CP2 140 aaKnown RBP13.15□□□□□ -0.3
PIKFYVE-206ENST00000443896 UHRF2Q96PU4 802 aa13.15□□□□□ -0.3
PIKFYVE-206ENST00000443896 NABP2Q9BQ15 211 aa13.15□□□□□ -0.3
PIKFYVE-206ENST00000443896 SEPSECSQ9HD40 501 aaKnown RBP13.15□□□□□ -0.3
PIKFYVE-206ENST00000443896 ZNF137PP52743 207 aa13.15□□□□□ -0.3
PIKFYVE-206ENST00000443896 PAFAH1B2P68402 229 aa13.15□□□□□ -0.3
PIKFYVE-206ENST00000443896 TMEM144Q7Z5S9 345 aa13.15□□□□□ -0.3
PIKFYVE-206ENST00000443896 MRPL52Q86TS9 123 aaKnown RBP13.15□□□□□ -0.3
PIKFYVE-206ENST00000443896 PDPNQ86YL7 162 aa13.15□□□□□ -0.3
PIKFYVE-206ENST00000443896 Q8N976 141 aa13.15□□□□□ -0.3
PIKFYVE-206ENST00000443896 GNB4Q9HAV0 340 aa13.15□□□□□ -0.3
PIKFYVE-206ENST00000443896 RHOBP62745 196 aa13.15□□□□□ -0.3
PIKFYVE-206ENST00000443896 Q56UQ5 140 aa13.15□□□□□ -0.3
PIKFYVE-206ENST00000443896 OR4C13Q8NGP0 309 aa13.15□□□□□ -0.3
PIKFYVE-206ENST00000443896 NDUFA4L2Q9NRX3 87 aa13.15□□□□□ -0.3
PIKFYVE-206ENST00000443896 ROS1P08922 2347 aa13.14□□□□□ -0.31
PIKFYVE-206ENST00000443896 KALRNO60229 2985 aa13.14□□□□□ -0.31
PIKFYVE-206ENST00000443896 A0A1W2PN81 502 aa13.14□□□□□ -0.31
PIKFYVE-206ENST00000443896 PPBPP02775 128 aa13.14□□□□□ -0.31
PIKFYVE-206ENST00000443896 TYMSP04818 313 aa13.14□□□□□ -0.31
PIKFYVE-206ENST00000443896 RNASE2P10153 161 aaKnown RBP13.14□□□□□ -0.31
PIKFYVE-206ENST00000443896 CTRLP40313 264 aa13.14□□□□□ -0.31
PIKFYVE-206ENST00000443896 TCL1AP56279 114 aa13.14□□□□□ -0.31
PIKFYVE-206ENST00000443896 TOMM40O96008 361 aa13.14□□□□□ -0.31
PIKFYVE-206ENST00000443896 LINC00869P0C866 280 aa13.14□□□□□ -0.31
PIKFYVE-206ENST00000443896 RPL8P62917 257 aaKnown RBP13.14□□□□□ -0.31
PIKFYVE-206ENST00000443896 DIAPH2-AS1Q14236 149 aa13.14□□□□□ -0.31
PIKFYVE-206ENST00000443896 FBXL19-AS1Q494R0 122 aa13.14□□□□□ -0.31
PIKFYVE-206ENST00000443896 MPV17L2Q567V2 206 aa13.14□□□□□ -0.31
PIKFYVE-206ENST00000443896 OR4A5Q8NH83 315 aa13.14□□□□□ -0.31
PIKFYVE-206ENST00000443896 WASHC3Q9Y3C0 194 aa13.14□□□□□ -0.31
PIKFYVE-206ENST00000443896 INS-IGF2F8WCM5 200 aa13.14□□□□□ -0.31
PIKFYVE-206ENST00000443896 PLAUP00749 431 aa13.14□□□□□ -0.31
PIKFYVE-206ENST00000443896 USF1P22415 310 aaPredicted RBP13.14□□□□□ -0.31
PIKFYVE-206ENST00000443896 CA7P43166 264 aa13.14□□□□□ -0.31
PIKFYVE-206ENST00000443896 COMMD5Q9GZQ3 224 aa13.14□□□□□ -0.31
PIKFYVE-206ENST00000443896 C3orf79P0CE67 100 aa13.13□□□□□ -0.31
PIKFYVE-206ENST00000443896 GCHFRP30047 84 aa13.13□□□□□ -0.31
PIKFYVE-206ENST00000443896 HLA-DRB5Q30154 266 aa13.13□□□□□ -0.31
PIKFYVE-206ENST00000443896 SPATA31B1PQ5VZV4 182 aa13.13□□□□□ -0.31
PIKFYVE-206ENST00000443896 OR10W1Q8NGF6 305 aa13.13□□□□□ -0.31
PIKFYVE-206ENST00000443896 OR9G1Q8NH87 305 aa13.13□□□□□ -0.31
PIKFYVE-206ENST00000443896 TMEM167AQ8TBQ9 72 aa13.13□□□□□ -0.31
PIKFYVE-206ENST00000443896 PTPRQQ9UMZ3 2332 aa13.13□□□□□ -0.31
PIKFYVE-206ENST00000443896 MDFIC2A0A1B0GVS7 189 aa13.13□□□□□ -0.31
PIKFYVE-206ENST00000443896 GPX1P07203 203 aa13.13□□□□□ -0.31
PIKFYVE-206ENST00000443896 IGHV1-8P0DP01 117 aa13.13□□□□□ -0.31
PIKFYVE-206ENST00000443896 MOB3BQ86TA1 216 aa13.13□□□□□ -0.31
PIKFYVE-206ENST00000443896 VSTM2AQ8TAG5 236 aa13.13□□□□□ -0.31
PIKFYVE-206ENST00000443896 LINC01560Q8TB33 94 aa13.13□□□□□ -0.31
PIKFYVE-206ENST00000443896 CHTOPQ9Y3Y2 248 aaKnown RBP13.13□□□□□ -0.31
PIKFYVE-206ENST00000443896 ARFGEF3Q5TH69 2177 aa13.13□□□□□ -0.31
PIKFYVE-206ENST00000443896 IGKV1OR2-108A0A075B7D4 117 aa13.12□□□□□ -0.31
PIKFYVE-206ENST00000443896 UCNP55089 124 aa13.12□□□□□ -0.31
PIKFYVE-206ENST00000443896 NAA38Q9BRA0 125 aaKnown RBP13.12□□□□□ -0.31
PIKFYVE-206ENST00000443896 TNCP24821 2201 aa13.12□□□□□ -0.31
PIKFYVE-206ENST00000443896 CEP295Q9C0D2 2601 aa13.12□□□□□ -0.31
PIKFYVE-206ENST00000443896 IGLV2-23P01705 113 aa13.12□□□□□ -0.31
PIKFYVE-206ENST00000443896 SFRP2Q96HF1 295 aa13.12□□□□□ -0.31
PIKFYVE-206ENST00000443896 HSBP1L1C9JCN9 74 aa13.11□□□□□ -0.31
PIKFYVE-206ENST00000443896 LCN2P80188 198 aa13.11□□□□□ -0.31
PIKFYVE-206ENST00000443896 CD69Q07108 199 aa13.11□□□□□ -0.31
PIKFYVE-206ENST00000443896 YTHDF2Q9Y5A9 579 aaKnown RBP13.11□□□□□ -0.31
PIKFYVE-206ENST00000443896 FAM90A27PA6NNH2 459 aa13.11□□□□□ -0.31
PIKFYVE-206ENST00000443896 E7EUB6 86 aa13.11□□□□□ -0.31
PIKFYVE-206ENST00000443896 ZNF253O75346 499 aa13.11□□□□□ -0.31
PIKFYVE-206ENST00000443896 NAT8BQ9UHF3 227 aa13.11□□□□□ -0.31
PIKFYVE-206ENST00000443896 PKDREJQ9NTG1 2253 aa13.11□□□□□ -0.31
PIKFYVE-206ENST00000443896 GNG7O60262 68 aa13.1□□□□□ -0.31
PIKFYVE-206ENST00000443896 ERHP84090 104 aaKnown RBP13.1□□□□□ -0.31
PIKFYVE-206ENST00000443896 TMEM133Q9H2Q1 129 aa13.1□□□□□ -0.31
PIKFYVE-206ENST00000443896 TRBV20OR9-2A0A075B6H5 130 aa13.1□□□□□ -0.31
PIKFYVE-206ENST00000443896 DLL1O00548 723 aa13.1□□□□□ -0.31
PIKFYVE-206ENST00000443896 FOXH1O75593 365 aa13.1□□□□□ -0.31
PIKFYVE-206ENST00000443896 MT-CO2P00403 227 aa13.1□□□□□ -0.31
PIKFYVE-206ENST00000443896 CD99P14209 185 aa13.1□□□□□ -0.31
PIKFYVE-206ENST00000443896 ZNF841Q6ZN19 808 aa13.1□□□□□ -0.31
PIKFYVE-206ENST00000443896 LHFPL4Q7Z7J7 247 aa13.1□□□□□ -0.31
PIKFYVE-206ENST00000443896 CACNG8Q8WXS5 425 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 120.5 ms