RNA–Protein interactions for RNA: ENST00000442625.2

MCF2L-218, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-218ENST00000442625 MGST3O14880 152 aa11.5□□□□□ -0.57
MCF2L-218ENST00000442625 IGKV1-16P04430 117 aa11.5□□□□□ -0.57
MCF2L-218ENST00000442625 TSPOP30536 169 aa11.5□□□□□ -0.57
MCF2L-218ENST00000442625 MFAP2P55001 183 aa11.5□□□□□ -0.57
MCF2L-218ENST00000442625 HSPE1P61604 102 aaKnown RBP11.5□□□□□ -0.57
MCF2L-218ENST00000442625 OR10J3Q5JRS4 329 aa11.5□□□□□ -0.57
MCF2L-218ENST00000442625 GUCD1Q96NT3 240 aa11.5□□□□□ -0.57
MCF2L-218ENST00000442625 CSMD1Q96PZ7 3565 aa11.5□□□□□ -0.57
MCF2L-218ENST00000442625 TRBV9A0A0B4J1U6 114 aa11.5□□□□□ -0.57
MCF2L-218ENST00000442625 SPRY3O43610 288 aa11.5□□□□□ -0.57
MCF2L-218ENST00000442625 PLAUP00749 431 aa11.5□□□□□ -0.57
MCF2L-218ENST00000442625 PRB4P10163 310 aaPredicted RBP11.5□□□□□ -0.57
MCF2L-218ENST00000442625 GUSBP1Q15486 140 aa11.5□□□□□ -0.57
MCF2L-218ENST00000442625 RNASEKQ6P5S7 137 aaKnown RBP11.5□□□□□ -0.57
MCF2L-218ENST00000442625 FDCSPQ8NFU4 85 aa11.5□□□□□ -0.57
MCF2L-218ENST00000442625 DDB2Q92466 427 aa11.5□□□□□ -0.57
MCF2L-218ENST00000442625 SNRNP40Q96DI7 357 aaKnown RBP11.5□□□□□ -0.57
MCF2L-218ENST00000442625 FAM90A9PA6NNJ1 464 aa11.49□□□□□ -0.57
MCF2L-218ENST00000442625 SRRM4A7MD48 611 aaKnown RBP11.49□□□□□ -0.57
MCF2L-218ENST00000442625 SPACA3Q8IXA5 215 aa11.49□□□□□ -0.57
MCF2L-218ENST00000442625 DEFB108BQ8NET1 73 aa11.49□□□□□ -0.57
MCF2L-218ENST00000442625 OR2T6Q8NHC8 308 aa11.49□□□□□ -0.57
MCF2L-218ENST00000442625 RND1Q92730 232 aa11.49□□□□□ -0.57
MCF2L-218ENST00000442625 NEUROG1Q92886 237 aa11.49□□□□□ -0.57
MCF2L-218ENST00000442625 MCRIP2Q9BUT9 160 aaKnown RBP11.49□□□□□ -0.57
MCF2L-218ENST00000442625 RAB1BQ9H0U4 201 aa11.49□□□□□ -0.57
MCF2L-218ENST00000442625 OSTCQ9NRP0 149 aa11.49□□□□□ -0.57
MCF2L-218ENST00000442625 DYSFO75923 2080 aa11.49□□□□□ -0.57
MCF2L-218ENST00000442625 TANC2Q9HCD6 1990 aa11.49□□□□□ -0.57
MCF2L-218ENST00000442625 PLCE1Q9P212 2302 aa11.49□□□□□ -0.57
MCF2L-218ENST00000442625 J3QR06 171 aa11.49□□□□□ -0.57
MCF2L-218ENST00000442625 MMP23AO75900 390 aa11.49□□□□□ -0.57
MCF2L-218ENST00000442625 STUMQ69YW2 141 aa11.49□□□□□ -0.57
MCF2L-218ENST00000442625 IGF2BP2-AS1Q96M15 143 aa11.49□□□□□ -0.57
MCF2L-218ENST00000442625 TMEM14BQ9NUH8 114 aa11.49□□□□□ -0.57
MCF2L-218ENST00000442625 LY96Q9Y6Y9 160 aa11.49□□□□□ -0.57
MCF2L-218ENST00000442625 TACC2O95359 2948 aa11.48□□□□□ -0.57
MCF2L-218ENST00000442625 ADGRG4Q8IZF6 3080 aa11.48□□□□□ -0.57
MCF2L-218ENST00000442625 SMIM27A0A1W2PRY6 76 aa11.48□□□□□ -0.57
MCF2L-218ENST00000442625 C17orf58Q2M2W7 97 aa11.48□□□□□ -0.57
MCF2L-218ENST00000442625 MBNL2Q5VZF2 373 aaKnown RBP11.48□□□□□ -0.57
MCF2L-218ENST00000442625 TCF24Q7RTU0 167 aa11.48□□□□□ -0.57
MCF2L-218ENST00000442625 ZNF331Q9NQX6 463 aaPredicted RBP11.48□□□□□ -0.57
MCF2L-218ENST00000442625 ISLRO14498 428 aa11.48□□□□□ -0.57
MCF2L-218ENST00000442625 SIVA1O15304 175 aa11.48□□□□□ -0.57
MCF2L-218ENST00000442625 MT-ND6P03923 174 aa11.48□□□□□ -0.57
MCF2L-218ENST00000442625 IGLL1P15814 213 aa11.48□□□□□ -0.57
MCF2L-218ENST00000442625 GNG5P63218 68 aa11.48□□□□□ -0.57
MCF2L-218ENST00000442625 TRGV8A0A0C4DH27 118 aa11.47□□□□□ -0.57
MCF2L-218ENST00000442625 M0R2Z0 102 aa11.47□□□□□ -0.57
MCF2L-218ENST00000442625 F2RL2O00254 374 aa11.47□□□□□ -0.57
MCF2L-218ENST00000442625 HSBP1O75506 76 aa11.47□□□□□ -0.57
MCF2L-218ENST00000442625 LINC00173Q6ZV60 143 aa11.47□□□□□ -0.57
MCF2L-218ENST00000442625 ZNF738Q8NE65 137 aa11.47□□□□□ -0.57
MCF2L-218ENST00000442625 GLMPQ8WWB7 406 aa11.47□□□□□ -0.57
MCF2L-218ENST00000442625 TMEM167BQ9NRX6 74 aa11.47□□□□□ -0.57
MCF2L-218ENST00000442625 CEP250Q9BV73 2442 aa11.47□□□□□ -0.57
MCF2L-218ENST00000442625 TRAV30A0A087WSZ9 112 aa11.47□□□□□ -0.57
MCF2L-218ENST00000442625 VWC2LB2RUY7 222 aa11.47□□□□□ -0.57
MCF2L-218ENST00000442625 IGLV1-44P01699 117 aa11.47□□□□□ -0.57
MCF2L-218ENST00000442625 HLA-DQA1P01909 254 aa11.47□□□□□ -0.57
MCF2L-218ENST00000442625 PPOXP50336 477 aa11.47□□□□□ -0.57
MCF2L-218ENST00000442625 FOXA3P55318 350 aaPredicted RBP11.47□□□□□ -0.57
MCF2L-218ENST00000442625 CKS1BP61024 79 aa11.47□□□□□ -0.57
MCF2L-218ENST00000442625 ITLN1Q8WWA0 313 aa11.47□□□□□ -0.57
MCF2L-218ENST00000442625 TPPP3Q9BW30 176 aa11.47□□□□□ -0.57
MCF2L-218ENST00000442625 FAM181BA6NEQ2 426 aa11.46□□□□□ -0.57
MCF2L-218ENST00000442625 M0R1B8 84 aa11.46□□□□□ -0.57
MCF2L-218ENST00000442625 IGHG3P01860 377 aa11.46□□□□□ -0.57
MCF2L-218ENST00000442625 UBE2L3P68036 154 aaKnown RBP11.46□□□□□ -0.57
MCF2L-218ENST00000442625 PET117Q6UWS5 81 aa11.46□□□□□ -0.57
MCF2L-218ENST00000442625 NUP35Q8NFH5 326 aa11.46□□□□□ -0.57
MCF2L-218ENST00000442625 FOXA2Q9Y261 457 aaPredicted RBP11.46□□□□□ -0.57
MCF2L-218ENST00000442625 MGAQ8IWI9 3026 aa11.46□□□□□ -0.57
MCF2L-218ENST00000442625 PPIAL4EA0A075B759 164 aa11.46□□□□□ -0.58
MCF2L-218ENST00000442625 PPIAL4CA0A0B4J2A2 164 aa11.46□□□□□ -0.58
MCF2L-218ENST00000442625 IZUMO1RA6ND01 250 aa11.46□□□□□ -0.58
MCF2L-218ENST00000442625 E7EUB6 86 aa11.46□□□□□ -0.58
MCF2L-218ENST00000442625 PPIAL4DF5H284 164 aa11.46□□□□□ -0.58
MCF2L-218ENST00000442625 CNIH1O95406 144 aa11.46□□□□□ -0.58
MCF2L-218ENST00000442625 PPIAL4FP0DN26 164 aa11.46□□□□□ -0.58
MCF2L-218ENST00000442625 ZNF71Q9NQZ8 489 aaPredicted RBP11.45□□□□□ -0.58
MCF2L-218ENST00000442625 H3BTX0 84 aa11.45□□□□□ -0.58
MCF2L-218ENST00000442625 PPIAL4GP0DN37 164 aa11.45□□□□□ -0.58
MCF2L-218ENST00000442625 WT1P19544 449 aaPredicted RBP11.45□□□□□ -0.58
MCF2L-218ENST00000442625 ZNF841Q6ZN19 808 aa11.45□□□□□ -0.58
MCF2L-218ENST00000442625 C1orf162Q8NEQ5 155 aaPredicted RBP11.45□□□□□ -0.58
MCF2L-218ENST00000442625 DAZAP1Q96EP5 407 aaKnown RBP11.45□□□□□ -0.58
MCF2L-218ENST00000442625 SLC25A33Q9BSK2 321 aa11.45□□□□□ -0.58
MCF2L-218ENST00000442625 SLC25A2Q9BXI2 301 aa11.45□□□□□ -0.58
MCF2L-218ENST00000442625 TNFRSF19Q9NS68 423 aa11.45□□□□□ -0.58
MCF2L-218ENST00000442625 SLC25A10Q9UBX3 287 aaPredicted RBP11.45□□□□□ -0.58
MCF2L-218ENST00000442625 TIMM8BQ9Y5J9 83 aaPredicted RBP11.45□□□□□ -0.58
MCF2L-218ENST00000442625 ATMQ13315 3056 aa11.45□□□□□ -0.58
MCF2L-218ENST00000442625 TEX50A0A1B0GTY4 177 aa11.44□□□□□ -0.58
MCF2L-218ENST00000442625 SP9P0CG40 484 aa11.44□□□□□ -0.58
MCF2L-218ENST00000442625 KIR2DS2P43631 304 aa11.44□□□□□ -0.58
MCF2L-218ENST00000442625 CR1LQ2VPA4 569 aa11.44□□□□□ -0.58
MCF2L-218ENST00000442625 OR8B2Q96RD0 313 aa11.44□□□□□ -0.58
MCF2L-218ENST00000442625 PROCRQ9UNN8 238 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms