RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 SIGLEC9Q9Y336 463 aa14.9□□□□□ -0.02
CLK1-205ENST00000434813 C22orf46C9J442 243 aa14.9□□□□□ -0.02
CLK1-205ENST00000434813 GATCO43716 136 aaKnown RBP14.9□□□□□ -0.02
CLK1-205ENST00000434813 COMPP49747 757 aaPredicted RBP14.9□□□□□ -0.02
CLK1-205ENST00000434813 MFAP2P55001 183 aa14.9□□□□□ -0.02
CLK1-205ENST00000434813 PAX2Q02962 417 aa14.9□□□□□ -0.02
CLK1-205ENST00000434813 ZNF672Q499Z4 452 aaPredicted RBP14.9□□□□□ -0.02
CLK1-205ENST00000434813 MRPL18Q9H0U6 180 aaKnown RBP14.9□□□□□ -0.02
CLK1-205ENST00000434813 RNASE7Q9H1E1 156 aaKnown RBP14.9□□□□□ -0.02
CLK1-205ENST00000434813 INSIG2Q9Y5U4 225 aa14.9□□□□□ -0.02
CLK1-205ENST00000434813 RELNP78509 3460 aa14.9□□□□□ -0.02
CLK1-205ENST00000434813 PAX1P15863 534 aa14.89□□□□□ -0.03
CLK1-205ENST00000434813 CNTFRP26992 372 aa14.89□□□□□ -0.03
CLK1-205ENST00000434813 DLX1P56177 255 aa14.89□□□□□ -0.03
CLK1-205ENST00000434813 HCP5Q6MZN7 132 aa14.89□□□□□ -0.03
CLK1-205ENST00000434813 OR8I2Q8N0Y5 310 aa14.89□□□□□ -0.03
CLK1-205ENST00000434813 C22orf15Q8WYQ4 148 aa14.89□□□□□ -0.03
CLK1-205ENST00000434813 MISP3Q96FF7 219 aa14.89□□□□□ -0.03
CLK1-205ENST00000434813 TRGV9Q99603 122 aa14.89□□□□□ -0.03
CLK1-205ENST00000434813 TNFRSF19Q9NS68 423 aa14.89□□□□□ -0.03
CLK1-205ENST00000434813 PPIAL4CA0A0B4J2A2 164 aa14.88□□□□□ -0.03
CLK1-205ENST00000434813 PPIAL4GP0DN37 164 aa14.88□□□□□ -0.03
CLK1-205ENST00000434813 GRNP28799 593 aaKnown RBP14.88□□□□□ -0.03
CLK1-205ENST00000434813 DEFA6Q01524 100 aa14.88□□□□□ -0.03
CLK1-205ENST00000434813 ZNF329Q86UD4 541 aa14.88□□□□□ -0.03
CLK1-205ENST00000434813 TMEM256Q8N2U0 113 aa14.88□□□□□ -0.03
CLK1-205ENST00000434813 FXYD5Q96DB9 178 aa14.88□□□□□ -0.03
CLK1-205ENST00000434813 AMMECR1Q9Y4X0 333 aaPredicted RBP14.88□□□□□ -0.03
CLK1-205ENST00000434813 A0A1B0GUS0 222 aa14.88□□□□□ -0.03
CLK1-205ENST00000434813 CORTO00230 105 aa14.88□□□□□ -0.03
CLK1-205ENST00000434813 MOSP00540 346 aa14.88□□□□□ -0.03
CLK1-205ENST00000434813 CX3CL1P78423 397 aa14.88□□□□□ -0.03
CLK1-205ENST00000434813 RPL19P84098 196 aaKnown RBP14.88□□□□□ -0.03
CLK1-205ENST00000434813 IBA57Q5T440 356 aaKnown RBP14.88□□□□□ -0.03
CLK1-205ENST00000434813 LINC00305Q7Z4B0 112 aa14.88□□□□□ -0.03
CLK1-205ENST00000434813 TMEM116Q8NCL8 245 aa14.88□□□□□ -0.03
CLK1-205ENST00000434813 GNB1LQ9BYB4 327 aa14.88□□□□□ -0.03
CLK1-205ENST00000434813 STXBP6Q8NFX7 210 aa14.87□□□□□ -0.03
CLK1-205ENST00000434813 PERPQ96FX8 193 aa14.87□□□□□ -0.03
CLK1-205ENST00000434813 GRIFINA4D1Z8 144 aa14.87□□□□□ -0.03
CLK1-205ENST00000434813 SNURFLB1AK76 121 aa14.87□□□□□ -0.03
CLK1-205ENST00000434813 FCN1O00602 326 aa14.87□□□□□ -0.03
CLK1-205ENST00000434813 PEX7O00628 323 aa14.87□□□□□ -0.03
CLK1-205ENST00000434813 MT-ND6P03923 174 aa14.87□□□□□ -0.03
CLK1-205ENST00000434813 DDTP30046 118 aa14.87□□□□□ -0.03
CLK1-205ENST00000434813 IER3P46695 156 aa14.87□□□□□ -0.03
CLK1-205ENST00000434813 PRB3Q04118 309 aaPredicted RBP14.87□□□□□ -0.03
CLK1-205ENST00000434813 RUSC1-AS1Q66K80 236 aa14.87□□□□□ -0.03
CLK1-205ENST00000434813 PPP1R27Q86WC6 154 aa14.87□□□□□ -0.03
CLK1-205ENST00000434813 LURAP1LQ8IV03 231 aa14.87□□□□□ -0.03
CLK1-205ENST00000434813 RPEQ96AT9 228 aa14.87□□□□□ -0.03
CLK1-205ENST00000434813 TEX22C9J3V5 150 aa14.86□□□□□ -0.03
CLK1-205ENST00000434813 MGST1P10620 155 aaKnown RBP14.86□□□□□ -0.03
CLK1-205ENST00000434813 ESDP10768 282 aa14.86□□□□□ -0.03
CLK1-205ENST00000434813 COX7A1P24310 79 aa14.86□□□□□ -0.03
CLK1-205ENST00000434813 FXYD3Q14802 87 aa14.86□□□□□ -0.03
CLK1-205ENST00000434813 COX19Q49B96 90 aa14.86□□□□□ -0.03
CLK1-205ENST00000434813 WDR73Q6P4I2 378 aa14.86□□□□□ -0.03
CLK1-205ENST00000434813 OR8B3Q8NGG8 313 aa14.86□□□□□ -0.03
CLK1-205ENST00000434813 CMTM2Q8TAZ6 248 aa14.86□□□□□ -0.03
CLK1-205ENST00000434813 OR8B2Q96RD0 313 aa14.86□□□□□ -0.03
CLK1-205ENST00000434813 PRO1933Q9H354 126 aa14.86□□□□□ -0.03
CLK1-205ENST00000434813 TP53TG3Q9ULZ0 132 aa14.86□□□□□ -0.03
CLK1-205ENST00000434813 F11RQ9Y624 299 aaKnown RBP14.86□□□□□ -0.03
CLK1-205ENST00000434813 SMIM27A0A1W2PRY6 76 aa14.85□□□□□ -0.03
CLK1-205ENST00000434813 NUPR1O60356 82 aa14.85□□□□□ -0.03
CLK1-205ENST00000434813 MYCNOSP40205 109 aa14.85□□□□□ -0.03
CLK1-205ENST00000434813 CDSNQ15517 529 aa14.85□□□□□ -0.03
CLK1-205ENST00000434813 LY6LH3BQJ8 138 aa14.85□□□□□ -0.03
CLK1-205ENST00000434813 FRMD6-AS1P0C7T7 363 aa14.85□□□□□ -0.03
CLK1-205ENST00000434813 CRISP2P16562 243 aa14.85□□□□□ -0.03
CLK1-205ENST00000434813 IQCJQ1A5X6 159 aa14.85□□□□□ -0.03
CLK1-205ENST00000434813 C19orf35Q6ZS72 473 aa14.85□□□□□ -0.03
CLK1-205ENST00000434813 LY6G5BQ8NDX9 201 aa14.85□□□□□ -0.03
CLK1-205ENST00000434813 OR1B1Q8NGR6 318 aa14.85□□□□□ -0.03
CLK1-205ENST00000434813 RNF5Q99942 180 aa14.85□□□□□ -0.03
CLK1-205ENST00000434813 ORM2P19652 201 aa14.84□□□□□ -0.03
CLK1-205ENST00000434813 LINC00310P59036 64 aa14.84□□□□□ -0.03
CLK1-205ENST00000434813 FAM231DQ6ZW35 169 aa14.84□□□□□ -0.03
CLK1-205ENST00000434813 LINC00479Q96M42 142 aa14.84□□□□□ -0.03
CLK1-205ENST00000434813 ZNF705GA8MUZ8 300 aaPredicted RBP14.83□□□□□ -0.03
CLK1-205ENST00000434813 LIPFP07098 398 aa14.83□□□□□ -0.03
CLK1-205ENST00000434813 PLP1P60201 277 aa14.83□□□□□ -0.03
CLK1-205ENST00000434813 ZNF664Q8N3J9 261 aa14.83□□□□□ -0.03
CLK1-205ENST00000434813 C14orf144Q96I85 54 aa14.83□□□□□ -0.03
CLK1-205ENST00000434813 NOL4LQ96MY1 436 aaPredicted RBP14.83□□□□□ -0.03
CLK1-205ENST00000434813 NBASA2RRP1 2371 aa14.83□□□□□ -0.04
CLK1-205ENST00000434813 MALRD1Q5VYJ5 2156 aa14.83□□□□□ -0.04
CLK1-205ENST00000434813 APELAP0DMC3 54 aa14.83□□□□□ -0.04
CLK1-205ENST00000434813 RAB4BP61018 213 aa14.83□□□□□ -0.04
CLK1-205ENST00000434813 Q0VG73 95 aa14.83□□□□□ -0.04
CLK1-205ENST00000434813 SRSF12Q8WXF0 261 aaKnown RBP14.83□□□□□ -0.04
CLK1-205ENST00000434813 FBXL15Q9H469 300 aa14.83□□□□□ -0.04
CLK1-205ENST00000434813 PLXNB1O43157 2135 aa14.82□□□□□ -0.04
CLK1-205ENST00000434813 HYPMO75409 117 aa14.82□□□□□ -0.04
CLK1-205ENST00000434813 TCL1AP56279 114 aa14.82□□□□□ -0.04
CLK1-205ENST00000434813 TMEM136Q6ZRR5 245 aa14.82□□□□□ -0.04
CLK1-205ENST00000434813 REC114Q7Z4M0 266 aa14.82□□□□□ -0.04
CLK1-205ENST00000434813 NHLRC2Q8NBF2 726 aa14.82□□□□□ -0.04
CLK1-205ENST00000434813 ONECUT1Q9UBC0 465 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms