RNA–Protein interactions for RNA: ENST00000432306.5

VTI1A-202, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best) BASIC

Gene VTI1A, Length 1,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-202ENST00000432306 SIRPB1O00241 398 aa6.6□□□□□ -1.35
VTI1A-202ENST00000432306 ISLRO14498 428 aa6.6□□□□□ -1.35
VTI1A-202ENST00000432306 HSPB6O14558 160 aa6.6□□□□□ -1.35
VTI1A-202ENST00000432306 CXCL13O43927 109 aa6.6□□□□□ -1.35
VTI1A-202ENST00000432306 RAMP3O60896 148 aa6.6□□□□□ -1.35
VTI1A-202ENST00000432306 CRYAAP02489 173 aa6.6□□□□□ -1.35
VTI1A-202ENST00000432306 ARL14EPLP0DKL9 152 aa6.6□□□□□ -1.35
VTI1A-202ENST00000432306 TSPOP30536 169 aa6.6□□□□□ -1.35
VTI1A-202ENST00000432306 G6PCP35575 357 aa6.6□□□□□ -1.35
VTI1A-202ENST00000432306 HNRNPA3P51991 378 aaKnown RBP6.6□□□□□ -1.35
VTI1A-202ENST00000432306 RPL30P62888 115 aaKnown RBP6.6□□□□□ -1.35
VTI1A-202ENST00000432306 RPL31P62899 125 aaKnown RBP6.6□□□□□ -1.35
VTI1A-202ENST00000432306 TNXAQ16473 311 aa6.6□□□□□ -1.35
VTI1A-202ENST00000432306 SLC35E4Q6ICL7 350 aa6.6□□□□□ -1.35
VTI1A-202ENST00000432306 IL1F10Q8WWZ1 152 aa6.6□□□□□ -1.35
VTI1A-202ENST00000432306 HSD17B10Q99714 261 aaKnown RBP6.6□□□□□ -1.35
VTI1A-202ENST00000432306 PRRG4Q9BZD6 226 aa6.6□□□□□ -1.35
VTI1A-202ENST00000432306 TRAPPC2LQ9UL33 140 aa6.6□□□□□ -1.35
VTI1A-202ENST00000432306 POLDIP2Q9Y2S7 368 aa6.6□□□□□ -1.35
VTI1A-202ENST00000432306 KIAA2026Q5HYC2 2103 aa6.6□□□□□ -1.35
VTI1A-202ENST00000432306 TRAV30A0A087WSZ9 112 aa6.59□□□□□ -1.35
VTI1A-202ENST00000432306 TRAV38-1A0A0B4J264 116 aa6.59□□□□□ -1.35
VTI1A-202ENST00000432306 SMIM27A0A1W2PRY6 76 aa6.59□□□□□ -1.35
VTI1A-202ENST00000432306 DPRXA6NFQ7 191 aa6.59□□□□□ -1.35
VTI1A-202ENST00000432306 J3QR06 171 aa6.59□□□□□ -1.35
VTI1A-202ENST00000432306 TOX4O94842 621 aa6.59□□□□□ -1.35
VTI1A-202ENST00000432306 C3orf79P0CE67 100 aa6.59□□□□□ -1.35
VTI1A-202ENST00000432306 PMCHP20382 165 aa6.59□□□□□ -1.35
VTI1A-202ENST00000432306 GCHFRP30047 84 aa6.59□□□□□ -1.35
VTI1A-202ENST00000432306 VDAC2P45880 294 aaPredicted RBP6.59□□□□□ -1.35
VTI1A-202ENST00000432306 TFPI2P48307 235 aa6.59□□□□□ -1.35
VTI1A-202ENST00000432306 AMTP48728 403 aa6.59□□□□□ -1.35
VTI1A-202ENST00000432306 ZNF83P51522 516 aa6.59□□□□□ -1.35
VTI1A-202ENST00000432306 KLF5Q13887 457 aaPredicted RBP6.59□□□□□ -1.35
VTI1A-202ENST00000432306 MUC15Q8N387 334 aa6.59□□□□□ -1.35
VTI1A-202ENST00000432306 SCCPDHQ8NBX0 429 aa6.59□□□□□ -1.35
VTI1A-202ENST00000432306 ST6GALNAC3Q8NDV1 305 aa6.59□□□□□ -1.35
VTI1A-202ENST00000432306 OR4F17Q8NGA8 305 aa6.59□□□□□ -1.35
VTI1A-202ENST00000432306 UHRF2Q96PU4 802 aa6.59□□□□□ -1.35
VTI1A-202ENST00000432306 MGST2Q99735 147 aa6.59□□□□□ -1.35
VTI1A-202ENST00000432306 BET1LQ9NYM9 111 aa6.59□□□□□ -1.35
VTI1A-202ENST00000432306 KCNS2Q9ULS6 477 aa6.59□□□□□ -1.35
VTI1A-202ENST00000432306 RBM7Q9Y580 266 aaKnown RBP6.59□□□□□ -1.35
VTI1A-202ENST00000432306 HIVEP3Q5T1R4 2406 aa6.59□□□□□ -1.35
VTI1A-202ENST00000432306 IGHV5-10-1A0A0J9YXX1 117 aa6.59□□□□□ -1.36
VTI1A-202ENST00000432306 IGLC7A0M8Q6 106 aa6.59□□□□□ -1.36
VTI1A-202ENST00000432306 C5orf49A4QMS7 147 aa6.59□□□□□ -1.36
VTI1A-202ENST00000432306 F2Z2F3 143 aa6.59□□□□□ -1.36
VTI1A-202ENST00000432306 H0YJW9 148 aa6.59□□□□□ -1.36
VTI1A-202ENST00000432306 BMPR1BO00238 502 aa6.59□□□□□ -1.36
VTI1A-202ENST00000432306 RRHO14718 337 aa6.59□□□□□ -1.36
VTI1A-202ENST00000432306 CRXO43186 299 aaPredicted RBP6.59□□□□□ -1.36
VTI1A-202ENST00000432306 KLF7O75840 302 aaPredicted RBP6.59□□□□□ -1.36
VTI1A-202ENST00000432306 WT1P19544 449 aaPredicted RBP6.59□□□□□ -1.36
VTI1A-202ENST00000432306 REG1BP48304 166 aa6.59□□□□□ -1.36
VTI1A-202ENST00000432306 FOXE3Q13461 319 aa6.59□□□□□ -1.36
VTI1A-202ENST00000432306 RTL8BQ17RB0 113 aa6.59□□□□□ -1.36
VTI1A-202ENST00000432306 LRRC10Q5BKY1 277 aa6.59□□□□□ -1.36
VTI1A-202ENST00000432306 GCSAMLQ5JQS6 135 aa6.59□□□□□ -1.36
VTI1A-202ENST00000432306 Q6ZN92 141 aa6.59□□□□□ -1.36
VTI1A-202ENST00000432306 MYPOPQ86VE0 399 aaPredicted RBP6.59□□□□□ -1.36
VTI1A-202ENST00000432306 GALMQ96C23 342 aa6.59□□□□□ -1.36
VTI1A-202ENST00000432306 YTHDF2Q9Y5A9 579 aaKnown RBP6.59□□□□□ -1.36
VTI1A-202ENST00000432306 KIAA1549Q9HCM3 1950 aa6.58□□□□□ -1.36
VTI1A-202ENST00000432306 RELNP78509 3460 aa6.58□□□□□ -1.36
VTI1A-202ENST00000432306 UTP20O75691 2785 aaKnown RBP6.58□□□□□ -1.36
VTI1A-202ENST00000432306 TRAV9-2A0A087WT02 112 aa6.58□□□□□ -1.36
VTI1A-202ENST00000432306 TMEM30CPA0ZSE6 113 aa6.58□□□□□ -1.36
VTI1A-202ENST00000432306 C17orf98A8MV24 154 aa6.58□□□□□ -1.36
VTI1A-202ENST00000432306 M0QXV9 152 aa6.58□□□□□ -1.36
VTI1A-202ENST00000432306 SH2D1BO14796 132 aa6.58□□□□□ -1.36
VTI1A-202ENST00000432306 MRPL33O75394 65 aaKnown RBP6.58□□□□□ -1.36
VTI1A-202ENST00000432306 NGFP01138 241 aa6.58□□□□□ -1.36
VTI1A-202ENST00000432306 DEFA4P12838 97 aa6.58□□□□□ -1.36
VTI1A-202ENST00000432306 ARG2P78540 354 aa6.58□□□□□ -1.36
VTI1A-202ENST00000432306 KLRB1Q12918 225 aa6.58□□□□□ -1.36
VTI1A-202ENST00000432306 FAM231DQ6ZW35 169 aa6.58□□□□□ -1.36
VTI1A-202ENST00000432306 LYG1Q8N1E2 194 aa6.58□□□□□ -1.36
VTI1A-202ENST00000432306 APH1AQ96BI3 265 aa6.58□□□□□ -1.36
VTI1A-202ENST00000432306 ZNF488Q96MN9 340 aa6.58□□□□□ -1.36
VTI1A-202ENST00000432306 C19orf24Q9BVV8 132 aa6.58□□□□□ -1.36
VTI1A-202ENST00000432306 RTL8AQ9BWD3 113 aa6.58□□□□□ -1.36
VTI1A-202ENST00000432306 COMMD5Q9GZQ3 224 aa6.58□□□□□ -1.36
VTI1A-202ENST00000432306 OR2D2Q9H210 308 aa6.58□□□□□ -1.36
VTI1A-202ENST00000432306 NPVFQ9HCQ7 196 aa6.58□□□□□ -1.36
VTI1A-202ENST00000432306 ZNF71Q9NQZ8 489 aaPredicted RBP6.58□□□□□ -1.36
VTI1A-202ENST00000432306 NAT8BQ9UHF3 227 aa6.58□□□□□ -1.36
VTI1A-202ENST00000432306 CENPEQ02224 2701 aa6.58□□□□□ -1.36
VTI1A-202ENST00000432306 CHD3Q12873 2000 aaKnown RBP6.58□□□□□ -1.36
VTI1A-202ENST00000432306 ZNF503-AS2A6NEH8 195 aa6.57□□□□□ -1.36
VTI1A-202ENST00000432306 C12orf77C9JDV5 145 aa6.57□□□□□ -1.36
VTI1A-202ENST00000432306 SLC17A3O00476 420 aa6.57□□□□□ -1.36
VTI1A-202ENST00000432306 CA2P00918 260 aa6.57□□□□□ -1.36
VTI1A-202ENST00000432306 SP1P08047 785 aa6.57□□□□□ -1.36
VTI1A-202ENST00000432306 CELA2AP08217 269 aa6.57□□□□□ -1.36
VTI1A-202ENST00000432306 LINC00869P0C866 280 aa6.57□□□□□ -1.36
VTI1A-202ENST00000432306 KRTDAPP60985 99 aa6.57□□□□□ -1.36
VTI1A-202ENST00000432306 PLGLB1Q02325 96 aa6.57□□□□□ -1.36
VTI1A-202ENST00000432306 OR1C1Q15619 314 aa6.57□□□□□ -1.36
VTI1A-202ENST00000432306 GABRA6Q16445 453 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 121.6 ms