RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 OR4X1Q8NH49 305 aa9.45□□□□□ -0.9
SGCE-203ENST00000425444 TMEM231Q9H6L2 316 aa9.45□□□□□ -0.9
SGCE-203ENST00000425444 MRPL36Q9P0J6 103 aaKnown RBP9.45□□□□□ -0.9
SGCE-203ENST00000425444 TRAV30A0A087WSZ9 112 aa9.44□□□□□ -0.9
SGCE-203ENST00000425444 IGHV3-66A0A0C4DH42 116 aa9.44□□□□□ -0.9
SGCE-203ENST00000425444 A0A1B0GU03 582 aa9.44□□□□□ -0.9
SGCE-203ENST00000425444 IFNA10P01566 189 aa9.44□□□□□ -0.9
SGCE-203ENST00000425444 APOC4P55056 127 aa9.44□□□□□ -0.9
SGCE-203ENST00000425444 RPL11P62913 178 aaKnown RBP9.44□□□□□ -0.9
SGCE-203ENST00000425444 MLANAQ16655 118 aa9.44□□□□□ -0.9
SGCE-203ENST00000425444 TMEM128Q5BJH2 165 aa9.44□□□□□ -0.9
SGCE-203ENST00000425444 NMSQ5H8A3 153 aa9.44□□□□□ -0.9
SGCE-203ENST00000425444 TCF24Q7RTU0 167 aa9.44□□□□□ -0.9
SGCE-203ENST00000425444 GBGT1Q8N5D6 347 aa9.44□□□□□ -0.9
SGCE-203ENST00000425444 OR1S1Q8NH92 325 aa9.44□□□□□ -0.9
SGCE-203ENST00000425444 RNASEH2CQ8TDP1 164 aaKnown RBP9.44□□□□□ -0.9
SGCE-203ENST00000425444 DTD1Q8TEA8 209 aa9.44□□□□□ -0.9
SGCE-203ENST00000425444 DEDD2Q8WXF8 326 aa9.44□□□□□ -0.9
SGCE-203ENST00000425444 ST8SIA2Q92186 375 aa9.44□□□□□ -0.9
SGCE-203ENST00000425444 NARS2Q96I59 477 aaKnown RBP9.44□□□□□ -0.9
SGCE-203ENST00000425444 METTL26Q96S19 204 aa9.44□□□□□ -0.9
SGCE-203ENST00000425444 SLC25A21Q9BQT8 299 aaPredicted RBP9.44□□□□□ -0.9
SGCE-203ENST00000425444 ZFAND3Q9H8U3 227 aa9.44□□□□□ -0.9
SGCE-203ENST00000425444 DNAH11Q96DT5 4516 aa9.44□□□□□ -0.9
SGCE-203ENST00000425444 HERC1Q15751 4861 aa9.43□□□□□ -0.9
SGCE-203ENST00000425444 CD5P06127 495 aa9.43□□□□□ -0.9
SGCE-203ENST00000425444 SLC25A4P12235 298 aa9.43□□□□□ -0.9
SGCE-203ENST00000425444 RND2P52198 227 aa9.43□□□□□ -0.9
SGCE-203ENST00000425444 TNFRSF9Q07011 255 aa9.43□□□□□ -0.9
SGCE-203ENST00000425444 TIGITQ495A1 244 aa9.43□□□□□ -0.9
SGCE-203ENST00000425444 ETFRF1Q6IPR1 90 aa9.43□□□□□ -0.9
SGCE-203ENST00000425444 WFDC3Q8IUB2 231 aa9.43□□□□□ -0.9
SGCE-203ENST00000425444 OR1S2Q8NGQ3 325 aa9.43□□□□□ -0.9
SGCE-203ENST00000425444 SRRQ9GZT4 340 aa9.43□□□□□ -0.9
SGCE-203ENST00000425444 HSPB7Q9UBY9 170 aa9.43□□□□□ -0.9
SGCE-203ENST00000425444 DUXBA0A1W2PPF3 345 aa9.42□□□□□ -0.9
SGCE-203ENST00000425444 A0A1W2PS18 150 aa9.42□□□□□ -0.9
SGCE-203ENST00000425444 DNASE2O00115 360 aaPredicted RBP9.42□□□□□ -0.9
SGCE-203ENST00000425444 DEDDO75618 318 aa9.42□□□□□ -0.9
SGCE-203ENST00000425444 APOHP02749 345 aaPredicted RBP9.42□□□□□ -0.9
SGCE-203ENST00000425444 RPL35AP18077 110 aaKnown RBP9.42□□□□□ -0.9
SGCE-203ENST00000425444 NPPCP23582 126 aa9.42□□□□□ -0.9
SGCE-203ENST00000425444 OR10J1P30954 320 aa9.42□□□□□ -0.9
SGCE-203ENST00000425444 CMC4P56277 68 aaPredicted RBP9.42□□□□□ -0.9
SGCE-203ENST00000425444 RBMS2Q15434 407 aaKnown RBP9.42□□□□□ -0.9
SGCE-203ENST00000425444 PRSS54Q6PEW0 395 aa9.42□□□□□ -0.9
SGCE-203ENST00000425444 APRG1Q8IVJ8 170 aa9.42□□□□□ -0.9
SGCE-203ENST00000425444 CENPSQ8N2Z9 138 aa9.42□□□□□ -0.9
SGCE-203ENST00000425444 ACY3Q96HD9 319 aa9.42□□□□□ -0.9
SGCE-203ENST00000425444 RBKSQ9H477 322 aa9.42□□□□□ -0.9
SGCE-203ENST00000425444 DNAH17Q9UFH2 4485 aa9.41□□□□□ -0.9
SGCE-203ENST00000425444 DFFBO76075 338 aa9.41□□□□□ -0.9
SGCE-203ENST00000425444 IGKV1-17P01599 117 aa9.41□□□□□ -0.9
SGCE-203ENST00000425444 IFNA4P05014 189 aa9.41□□□□□ -0.9
SGCE-203ENST00000425444 IGLC1P0CG04 106 aa9.41□□□□□ -0.9
SGCE-203ENST00000425444 DEFB135Q30KP9 77 aa9.41□□□□□ -0.9
SGCE-203ENST00000425444 FAM90A2PQ658T7 463 aa9.41□□□□□ -0.9
SGCE-203ENST00000425444 STPG3Q8N7X2 389 aa9.41□□□□□ -0.9
SGCE-203ENST00000425444 Q8WTZ3 238 aa9.41□□□□□ -0.9
SGCE-203ENST00000425444 TMEM170AQ8WVE7 144 aa9.41□□□□□ -0.9
SGCE-203ENST00000425444 GRAMD2BQ96HH9 432 aa9.41□□□□□ -0.9
SGCE-203ENST00000425444 VSIRQ9H7M9 311 aa9.41□□□□□ -0.9
SGCE-203ENST00000425444 RABAC1Q9UI14 185 aa9.41□□□□□ -0.9
SGCE-203ENST00000425444 U3KQ87 197 aa9.41□□□□□ -0.9
SGCE-203ENST00000425444 LINC00854A0A1B0GVQ3 168 aa9.4□□□□□ -0.9
SGCE-203ENST00000425444 CXorf65A6NEN9 183 aa9.4□□□□□ -0.9
SGCE-203ENST00000425444 SFT2D2O95562 160 aa9.4□□□□□ -0.9
SGCE-203ENST00000425444 IAPPP10997 89 aa9.4□□□□□ -0.9
SGCE-203ENST00000425444 PPP1R1AQ13522 171 aa9.4□□□□□ -0.9
SGCE-203ENST00000425444 PMS2P11Q13670 270 aa9.4□□□□□ -0.9
SGCE-203ENST00000425444 NPIPB3Q92617 1050 aa9.4□□□□□ -0.9
SGCE-203ENST00000425444 OVOL2Q9BRP0 275 aa9.4□□□□□ -0.9
SGCE-203ENST00000425444 MS4A6AQ9H2W1 248 aa9.4□□□□□ -0.9
SGCE-203ENST00000425444 MAP6D1Q9H9H5 199 aa9.4□□□□□ -0.9
SGCE-203ENST00000425444 PAIP2BQ9ULR5 123 aaKnown RBP9.4□□□□□ -0.9
SGCE-203ENST00000425444 KIR2DL5BA0A0G2JN68 375 aa9.39□□□□□ -0.91
SGCE-203ENST00000425444 KIR2DL5BA0A0G2JPC4 375 aa9.39□□□□□ -0.91
SGCE-203ENST00000425444 NAP1L6A6NFF2 107 aa9.39□□□□□ -0.91
SGCE-203ENST00000425444 CENPXA8MT69 81 aa9.39□□□□□ -0.91
SGCE-203ENST00000425444 UBE2CO00762 179 aa9.39□□□□□ -0.91
SGCE-203ENST00000425444 SPRY2O43597 315 aa9.39□□□□□ -0.91
SGCE-203ENST00000425444 IL4P05112 153 aa9.39□□□□□ -0.91
SGCE-203ENST00000425444 HOXB5P09067 269 aa9.39□□□□□ -0.91
SGCE-203ENST00000425444 CRYBB3P26998 211 aa9.39□□□□□ -0.91
SGCE-203ENST00000425444 P2RY1P47900 373 aa9.39□□□□□ -0.91
SGCE-203ENST00000425444 EIF2B2P49770 351 aaKnown RBP9.39□□□□□ -0.91
SGCE-203ENST00000425444 YPEL3P61236 119 aaPredicted RBP9.39□□□□□ -0.91
SGCE-203ENST00000425444 ZNF124Q15973 351 aa9.39□□□□□ -0.91
SGCE-203ENST00000425444 BAK1Q16611 211 aa9.39□□□□□ -0.91
SGCE-203ENST00000425444 Q6ZWC4 215 aa9.39□□□□□ -0.91
SGCE-203ENST00000425444 KIR2DL5AQ8N109 375 aa9.39□□□□□ -0.91
SGCE-203ENST00000425444 LILRB2Q8N423 598 aa9.39□□□□□ -0.91
SGCE-203ENST00000425444 LRTM2Q8N967 370 aa9.39□□□□□ -0.91
SGCE-203ENST00000425444 STXBP6Q8NFX7 210 aa9.39□□□□□ -0.91
SGCE-203ENST00000425444 KIR2DL5BQ8NHK3 375 aa9.39□□□□□ -0.91
SGCE-203ENST00000425444 SLC35E1Q96K37 410 aa9.39□□□□□ -0.91
SGCE-203ENST00000425444 TMED3Q9Y3Q3 217 aa9.39□□□□□ -0.91
SGCE-203ENST00000425444 TRAV2A0A0B4J234 112 aa9.38□□□□□ -0.91
SGCE-203ENST00000425444 MED6O75586 246 aa9.38□□□□□ -0.91
SGCE-203ENST00000425444 HNRNPCP07910 306 aaKnown RBP eCLIP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms