RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 CCL7P80098 99 aa9.22□□□□□ -0.93
SEC61A1-202ENST00000424880 PCOLCEQ15113 449 aa9.22□□□□□ -0.93
SEC61A1-202ENST00000424880 FAM106AQ4KMX7 169 aa9.22□□□□□ -0.93
SEC61A1-202ENST00000424880 WIPF2Q8TF74 440 aaPredicted RBP9.22□□□□□ -0.93
SEC61A1-202ENST00000424880 IGF2BP2-AS1Q96M15 143 aa9.22□□□□□ -0.93
SEC61A1-202ENST00000424880 ZNF48Q96MX3 618 aaPredicted RBP9.22□□□□□ -0.93
SEC61A1-202ENST00000424880 TMEM191AQ9H0A3 160 aa9.22□□□□□ -0.93
SEC61A1-202ENST00000424880 MPDU1O75352 247 aa9.21□□□□□ -0.93
SEC61A1-202ENST00000424880 EIF4EBP1Q13541 118 aaPredicted RBP9.21□□□□□ -0.93
SEC61A1-202ENST00000424880 KIR3DS1Q14943 382 aa9.21□□□□□ -0.93
SEC61A1-202ENST00000424880 RASL11AQ6T310 242 aa9.21□□□□□ -0.93
SEC61A1-202ENST00000424880 ZNF788Q6ZQV5 615 aa9.21□□□□□ -0.93
SEC61A1-202ENST00000424880 OR10W1Q8NGF6 305 aa9.21□□□□□ -0.93
SEC61A1-202ENST00000424880 OR8A1Q8NGG7 326 aa9.21□□□□□ -0.93
SEC61A1-202ENST00000424880 OR2K2Q8NGT1 345 aa9.21□□□□□ -0.93
SEC61A1-202ENST00000424880 TTTY13Q9BZ97 58 aa9.21□□□□□ -0.93
SEC61A1-202ENST00000424880 AMMECR1Q9Y4X0 333 aaPredicted RBP9.21□□□□□ -0.93
SEC61A1-202ENST00000424880 SSBP2P81877 361 aaPredicted RBP9.21□□□□□ -0.94
SEC61A1-202ENST00000424880 LINC00596Q86U02 117 aa9.21□□□□□ -0.94
SEC61A1-202ENST00000424880 SPCS1Q9Y6A9 102 aa9.21□□□□□ -0.94
SEC61A1-202ENST00000424880 MGAQ8IWI9 3026 aa9.21□□□□□ -0.94
SEC61A1-202ENST00000424880 C9orf118A6NHY6 69 aa9.2□□□□□ -0.94
SEC61A1-202ENST00000424880 J3QT63 122 aa9.2□□□□□ -0.94
SEC61A1-202ENST00000424880 ZNF134P52741 427 aa9.2□□□□□ -0.94
SEC61A1-202ENST00000424880 PMS2CLQ68D20 193 aa9.2□□□□□ -0.94
SEC61A1-202ENST00000424880 SPINK14Q6IE38 97 aa9.2□□□□□ -0.94
SEC61A1-202ENST00000424880 WDR82Q6UXN9 313 aa9.2□□□□□ -0.94
SEC61A1-202ENST00000424880 SAP25Q8TEE9 199 aa9.2□□□□□ -0.94
SEC61A1-202ENST00000424880 SIGMAR1Q99720 223 aa9.2□□□□□ -0.94
SEC61A1-202ENST00000424880 TPPP3Q9BW30 176 aa9.2□□□□□ -0.94
SEC61A1-202ENST00000424880 MAP1LC3CQ9BXW4 147 aa9.2□□□□□ -0.94
SEC61A1-202ENST00000424880 ADAMTS20P59510 1910 aa9.2□□□□□ -0.94
SEC61A1-202ENST00000424880 TECTAO75443 2155 aa9.2□□□□□ -0.94
SEC61A1-202ENST00000424880 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.2□□□□□ -0.94
SEC61A1-202ENST00000424880 LOC389332A0A1B0GUA5 103 aa9.2□□□□□ -0.94
SEC61A1-202ENST00000424880 PATE3B3GLJ2 98 aa9.2□□□□□ -0.94
SEC61A1-202ENST00000424880 LRRC29Q8WV35 223 aa9.2□□□□□ -0.94
SEC61A1-202ENST00000424880 TAAR6Q96RI8 345 aa9.2□□□□□ -0.94
SEC61A1-202ENST00000424880 NPFFR1Q9GZQ6 430 aa9.2□□□□□ -0.94
SEC61A1-202ENST00000424880 MS4A6AQ9H2W1 248 aa9.2□□□□□ -0.94
SEC61A1-202ENST00000424880 OBP2BQ9NPH6 170 aa9.2□□□□□ -0.94
SEC61A1-202ENST00000424880 IDI2-AS1Q9NZ38 188 aa9.2□□□□□ -0.94
SEC61A1-202ENST00000424880 ZNRD1Q9P1U0 126 aa9.2□□□□□ -0.94
SEC61A1-202ENST00000424880 PLCE1Q9P212 2302 aa9.2□□□□□ -0.94
SEC61A1-202ENST00000424880 DMXL1Q9Y485 3027 aa9.2□□□□□ -0.94
SEC61A1-202ENST00000424880 TMEM30CPA0ZSE6 113 aa9.2□□□□□ -0.94
SEC61A1-202ENST00000424880 H3BRM9 83 aa9.2□□□□□ -0.94
SEC61A1-202ENST00000424880 K7ERJ3 54 aa9.2□□□□□ -0.94
SEC61A1-202ENST00000424880 DUTP33316 252 aaKnown RBP9.2□□□□□ -0.94
SEC61A1-202ENST00000424880 PLP2Q04941 152 aa9.2□□□□□ -0.94
SEC61A1-202ENST00000424880 HES7Q9BYE0 225 aa9.2□□□□□ -0.94
SEC61A1-202ENST00000424880 TMEM189A5PLL7 270 aa9.19□□□□□ -0.94
SEC61A1-202ENST00000424880 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.19□□□□□ -0.94
SEC61A1-202ENST00000424880 CHEK1O14757 476 aa9.19□□□□□ -0.94
SEC61A1-202ENST00000424880 ZZEF1O43149 2961 aa9.19□□□□□ -0.94
SEC61A1-202ENST00000424880 WISP2O76076 250 aa9.19□□□□□ -0.94
SEC61A1-202ENST00000424880 RAB31Q13636 194 aa9.19□□□□□ -0.94
SEC61A1-202ENST00000424880 MOB1BQ7L9L4 216 aa9.19□□□□□ -0.94
SEC61A1-202ENST00000424880 POLDIP2Q9Y2S7 368 aa9.19□□□□□ -0.94
SEC61A1-202ENST00000424880 MC5RP33032 325 aa9.19□□□□□ -0.94
SEC61A1-202ENST00000424880 NMUP48645 174 aa9.19□□□□□ -0.94
SEC61A1-202ENST00000424880 OR5A1Q8NGJ0 315 aa9.19□□□□□ -0.94
SEC61A1-202ENST00000424880 GTSF1Q8WW33 167 aa9.19□□□□□ -0.94
SEC61A1-202ENST00000424880 NEU4Q8WWR8 484 aaPredicted RBP9.19□□□□□ -0.94
SEC61A1-202ENST00000424880 TSSC4Q9Y5U2 329 aaPredicted RBP9.19□□□□□ -0.94
SEC61A1-202ENST00000424880 ERVK-16P61578 105 aa9.18□□□□□ -0.94
SEC61A1-202ENST00000424880 PRR20EP86478 221 aa9.18□□□□□ -0.94
SEC61A1-202ENST00000424880 PRR20CP86479 221 aa9.18□□□□□ -0.94
SEC61A1-202ENST00000424880 PRR20DP86480 221 aa9.18□□□□□ -0.94
SEC61A1-202ENST00000424880 PRR20BP86481 221 aa9.18□□□□□ -0.94
SEC61A1-202ENST00000424880 PRR20AP86496 221 aa9.18□□□□□ -0.94
SEC61A1-202ENST00000424880 OR1C1Q15619 314 aa9.18□□□□□ -0.94
SEC61A1-202ENST00000424880 RTL8BQ17RB0 113 aa9.18□□□□□ -0.94
SEC61A1-202ENST00000424880 ACP1P24666 158 aa9.18□□□□□ -0.94
SEC61A1-202ENST00000424880 PCP2Q8IVA1 136 aa9.18□□□□□ -0.94
SEC61A1-202ENST00000424880 OR2V2Q96R30 315 aa9.18□□□□□ -0.94
SEC61A1-202ENST00000424880 ADGRG4Q8IZF6 3080 aa9.18□□□□□ -0.94
SEC61A1-202ENST00000424880 TRAV8-1A0A0A6YYK1 113 aa9.18□□□□□ -0.94
SEC61A1-202ENST00000424880 RAB9AP51151 201 aa9.18□□□□□ -0.94
SEC61A1-202ENST00000424880 LOXL1Q08397 574 aaPredicted RBP9.18□□□□□ -0.94
SEC61A1-202ENST00000424880 TCTEX1D4Q5JR98 221 aa9.18□□□□□ -0.94
SEC61A1-202ENST00000424880 TMEM167BQ9NRX6 74 aa9.18□□□□□ -0.94
SEC61A1-202ENST00000424880 JKAMPQ9P055 326 aa9.18□□□□□ -0.94
SEC61A1-202ENST00000424880 CUL9Q8IWT3 2517 aa9.18□□□□□ -0.94
SEC61A1-202ENST00000424880 TNRC6BQ9UPQ9 1833 aaKnown RBP9.17□□□□□ -0.94
SEC61A1-202ENST00000424880 IGHV1-45A0A0A0MS14 117 aa9.17□□□□□ -0.94
SEC61A1-202ENST00000424880 IGHV5-10-1A0A0J9YXX1 117 aa9.17□□□□□ -0.94
SEC61A1-202ENST00000424880 OOEPA6NGQ2 149 aa9.17□□□□□ -0.94
SEC61A1-202ENST00000424880 OR2J3O76001 311 aa9.17□□□□□ -0.94
SEC61A1-202ENST00000424880 SH2D6Q7Z4S9 175 aa9.17□□□□□ -0.94
SEC61A1-202ENST00000424880 MPC1Q9Y5U8 109 aa9.17□□□□□ -0.94
SEC61A1-202ENST00000424880 TRAV26-1A0A087WT03 109 aa9.17□□□□□ -0.94
SEC61A1-202ENST00000424880 PSMB11A5LHX3 300 aa9.17□□□□□ -0.94
SEC61A1-202ENST00000424880 SP9P0CG40 484 aa9.17□□□□□ -0.94
SEC61A1-202ENST00000424880 APELAP0DMC3 54 aa9.17□□□□□ -0.94
SEC61A1-202ENST00000424880 TIMM23BQ5SRD1 257 aa9.17□□□□□ -0.94
SEC61A1-202ENST00000424880 MDP1Q86V88 176 aa9.17□□□□□ -0.94
SEC61A1-202ENST00000424880 ZBTB34Q8NCN2 500 aa9.17□□□□□ -0.94
SEC61A1-202ENST00000424880 FAM222BQ8WU58 562 aa9.17□□□□□ -0.94
SEC61A1-202ENST00000424880 RTL8AQ9BWD3 113 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms