RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 APOC4P55056 127 aa13.08□□□□□ -0.32
LSM5-204ENST00000409909 BAK1Q16611 211 aa13.08□□□□□ -0.32
LSM5-204ENST00000409909 DTD1Q8TEA8 209 aa13.08□□□□□ -0.32
LSM5-204ENST00000409909 MS4A6AQ9H2W1 248 aa13.08□□□□□ -0.32
LSM5-204ENST00000409909 KIR2DL5BA0A0G2JN68 375 aa13.07□□□□□ -0.32
LSM5-204ENST00000409909 KIR2DL5BA0A0G2JPC4 375 aa13.07□□□□□ -0.32
LSM5-204ENST00000409909 IFNA10P01566 189 aa13.07□□□□□ -0.32
LSM5-204ENST00000409909 VAMP1P23763 118 aa13.07□□□□□ -0.32
LSM5-204ENST00000409909 OR10J1P30954 320 aa13.07□□□□□ -0.32
LSM5-204ENST00000409909 BMI1P35226 326 aa13.07□□□□□ -0.32
LSM5-204ENST00000409909 PPP1R1AQ13522 171 aa13.07□□□□□ -0.32
LSM5-204ENST00000409909 Q6ZWC4 215 aa13.07□□□□□ -0.32
LSM5-204ENST00000409909 WFDC3Q8IUB2 231 aa13.07□□□□□ -0.32
LSM5-204ENST00000409909 KIR2DL5AQ8N109 375 aa13.07□□□□□ -0.32
LSM5-204ENST00000409909 LRTM2Q8N967 370 aa13.07□□□□□ -0.32
LSM5-204ENST00000409909 OR1S2Q8NGQ3 325 aa13.07□□□□□ -0.32
LSM5-204ENST00000409909 OR1S1Q8NH92 325 aa13.07□□□□□ -0.32
LSM5-204ENST00000409909 KIR2DL5BQ8NHK3 375 aa13.07□□□□□ -0.32
LSM5-204ENST00000409909 NPIPB3Q92617 1050 aa13.07□□□□□ -0.32
LSM5-204ENST00000409909 METTL26Q96S19 204 aa13.07□□□□□ -0.32
LSM5-204ENST00000409909 SDHCQ99643 169 aaPredicted RBP13.07□□□□□ -0.32
LSM5-204ENST00000409909 MAP6D1Q9H9H5 199 aa13.07□□□□□ -0.32
LSM5-204ENST00000409909 U3KQ87 197 aa13.07□□□□□ -0.32
LSM5-204ENST00000409909 DUXBA0A1W2PPF3 345 aa13.06□□□□□ -0.32
LSM5-204ENST00000409909 UBE2CO00762 179 aa13.06□□□□□ -0.32
LSM5-204ENST00000409909 SCGB2A1O75556 95 aa13.06□□□□□ -0.32
LSM5-204ENST00000409909 SFT2D2O95562 160 aa13.06□□□□□ -0.32
LSM5-204ENST00000409909 CMC4P56277 68 aaPredicted RBP13.06□□□□□ -0.32
LSM5-204ENST00000409909 YPEL3P61236 119 aaPredicted RBP13.06□□□□□ -0.32
LSM5-204ENST00000409909 RPL11P62913 178 aaKnown RBP13.06□□□□□ -0.32
LSM5-204ENST00000409909 PAFAH1B2P68402 229 aa13.06□□□□□ -0.32
LSM5-204ENST00000409909 RBMS2Q15434 407 aaKnown RBP13.06□□□□□ -0.32
LSM5-204ENST00000409909 DEFB135Q30KP9 77 aa13.06□□□□□ -0.32
LSM5-204ENST00000409909 ETFRF1Q6IPR1 90 aa13.06□□□□□ -0.32
LSM5-204ENST00000409909 NOXA1Q86UR1 476 aa13.06□□□□□ -0.32
LSM5-204ENST00000409909 FAM24BQ8N5W8 94 aa13.06□□□□□ -0.32
LSM5-204ENST00000409909 U3KQE9 123 aa13.06□□□□□ -0.32
LSM5-204ENST00000409909 PLECQ15149 4684 aaKnown RBP13.06□□□□□ -0.32
LSM5-204ENST00000409909 A0A1W2PS18 150 aa13.05□□□□□ -0.32
LSM5-204ENST00000409909 DNASE2O00115 360 aaPredicted RBP13.05□□□□□ -0.32
LSM5-204ENST00000409909 SPRY2O43597 315 aa13.05□□□□□ -0.32
LSM5-204ENST00000409909 STPG3Q8N7X2 389 aa13.05□□□□□ -0.32
LSM5-204ENST00000409909 Q8WTZ3 238 aa13.05□□□□□ -0.32
LSM5-204ENST00000409909 ACY3Q96HD9 319 aa13.05□□□□□ -0.32
LSM5-204ENST00000409909 TMEM231Q9H6L2 316 aa13.05□□□□□ -0.32
LSM5-204ENST00000409909 TP53TG1Q9Y2A0 90 aa13.05□□□□□ -0.32
LSM5-204ENST00000409909 TRAV2A0A0B4J234 112 aa13.04□□□□□ -0.32
LSM5-204ENST00000409909 P2RY1P47900 373 aa13.04□□□□□ -0.32
LSM5-204ENST00000409909 CENPSQ8N2Z9 138 aa13.04□□□□□ -0.32
LSM5-204ENST00000409909 RNF183Q96D59 192 aa13.04□□□□□ -0.32
LSM5-204ENST00000409909 DNAH1Q9P2D7 4330 aa13.03□□□□□ -0.32
LSM5-204ENST00000409909 PIGBOS1A0A0B4J2F0 54 aa13.03□□□□□ -0.32
LSM5-204ENST00000409909 LCE6AA0A183 80 aa13.03□□□□□ -0.32
LSM5-204ENST00000409909 IFNA4P05014 189 aa13.03□□□□□ -0.32
LSM5-204ENST00000409909 SLC25A6P12236 298 aa13.03□□□□□ -0.32
LSM5-204ENST00000409909 USF2Q15853 346 aaPredicted RBP13.03□□□□□ -0.32
LSM5-204ENST00000409909 IL17DQ8TAD2 202 aa13.03□□□□□ -0.32
LSM5-204ENST00000409909 RABAC1Q9UI14 185 aa13.03□□□□□ -0.32
LSM5-204ENST00000409909 FLVCR2Q9UPI3 526 aa13.03□□□□□ -0.32
LSM5-204ENST00000409909 LINC00854A0A1B0GVQ3 168 aa13.02□□□□□ -0.33
LSM5-204ENST00000409909 K7EQG2 157 aa13.02□□□□□ -0.33
LSM5-204ENST00000409909 NDUFB6O95139 128 aa13.02□□□□□ -0.33
LSM5-204ENST00000409909 HOXB5P09067 269 aa13.02□□□□□ -0.33
LSM5-204ENST00000409909 RD3LP0DJH9 198 aa13.02□□□□□ -0.33
LSM5-204ENST00000409909 ATP5IP56385 69 aaPredicted RBP13.02□□□□□ -0.33
LSM5-204ENST00000409909 DEFB131AP59861 70 aa13.02□□□□□ -0.33
LSM5-204ENST00000409909 EWSR1Q01844 656 aaKnown RBP eCLIP13.02□□□□□ -0.33
LSM5-204ENST00000409909 GAMTQ14353 236 aa13.02□□□□□ -0.33
LSM5-204ENST00000409909 TRIQKQ629K1 86 aa13.02□□□□□ -0.33
LSM5-204ENST00000409909 LEMD1Q68G75 181 aa13.02□□□□□ -0.33
LSM5-204ENST00000409909 STXBP6Q8NFX7 210 aa13.02□□□□□ -0.33
LSM5-204ENST00000409909 CSTL1Q9H114 145 aa13.02□□□□□ -0.33
LSM5-204ENST00000409909 TMED3Q9Y3Q3 217 aa13.02□□□□□ -0.33
LSM5-204ENST00000409909 A0A0J9YWU9 116 aa13.01□□□□□ -0.33
LSM5-204ENST00000409909 NAP1L6A6NFF2 107 aa13.01□□□□□ -0.33
LSM5-204ENST00000409909 TOMM40O96008 361 aa13.01□□□□□ -0.33
LSM5-204ENST00000409909 IL4P05112 153 aa13.01□□□□□ -0.33
LSM5-204ENST00000409909 HNRNPCP07910 306 aaKnown RBP eCLIP13.01□□□□□ -0.33
LSM5-204ENST00000409909 IAPPP10997 89 aa13.01□□□□□ -0.33
LSM5-204ENST00000409909 PSG1P11464 419 aa13.01□□□□□ -0.33
LSM5-204ENST00000409909 BTCP35070 178 aa13.01□□□□□ -0.33
LSM5-204ENST00000409909 GPX4P36969 197 aaPredicted RBP13.01□□□□□ -0.33
LSM5-204ENST00000409909 INPP1P49441 399 aa13.01□□□□□ -0.33
LSM5-204ENST00000409909 UBE2MP61081 183 aaKnown RBP13.01□□□□□ -0.33
LSM5-204ENST00000409909 GGNBP1Q5YKI7 109 aa13.01□□□□□ -0.33
LSM5-204ENST00000409909 C16orf54Q6UWD8 224 aa13.01□□□□□ -0.33
LSM5-204ENST00000409909 GLMPQ8WWB7 406 aa13.01□□□□□ -0.33
LSM5-204ENST00000409909 NARS2Q96I59 477 aaKnown RBP13.01□□□□□ -0.33
LSM5-204ENST00000409909 MAGT1Q9H0U3 335 aa13.01□□□□□ -0.33
LSM5-204ENST00000409909 AGRNO00468 2067 aa13□□□□□ -0.33
LSM5-204ENST00000409909 IGKV1D-37A0A075B6S9 117 aa13□□□□□ -0.33
LSM5-204ENST00000409909 C9orf170A2RU37 121 aa13□□□□□ -0.33
LSM5-204ENST00000409909 FAM90A26D6RGX4 464 aa13□□□□□ -0.33
LSM5-204ENST00000409909 LYG2Q86SG7 212 aa13□□□□□ -0.33
LSM5-204ENST00000409909 DCANP1Q8TF63 244 aa13□□□□□ -0.33
LSM5-204ENST00000409909 GRAMD2BQ96HH9 432 aa13□□□□□ -0.33
LSM5-204ENST00000409909 MPTX1A8MV57 137 aa12.99□□□□□ -0.33
LSM5-204ENST00000409909 ADAP1O75689 374 aa12.99□□□□□ -0.33
LSM5-204ENST00000409909 ZNF90Q03938 601 aa12.99□□□□□ -0.33
LSM5-204ENST00000409909 OR51G1Q8NGK1 321 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 104 ms