RNA–Protein interactions for RNA: ENST00000409836.3

GYPC-203, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GYPC, Length 932 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-203ENST00000409836 GINS3Q9BRX5 216 aa10.55□□□□□ -0.72
GYPC-203ENST00000409836 MAGT1Q9H0U3 335 aa10.55□□□□□ -0.72
GYPC-203ENST00000409836 C11orf1Q9H5F2 150 aa10.55□□□□□ -0.72
GYPC-203ENST00000409836 COL7A1Q02388 2944 aa10.54□□□□□ -0.72
GYPC-203ENST00000409836 IGHV7-4-1A0A0J9YVY3 117 aa10.54□□□□□ -0.72
GYPC-203ENST00000409836 IZUMO1RA6ND01 250 aa10.54□□□□□ -0.72
GYPC-203ENST00000409836 PMS2P5A8MQ11 134 aa10.54□□□□□ -0.72
GYPC-203ENST00000409836 FNDC10F2Z333 226 aa10.54□□□□□ -0.72
GYPC-203ENST00000409836 INMT-MINDY4F8WBC2 141 aa10.54□□□□□ -0.72
GYPC-203ENST00000409836 MBPP02686 304 aaPredicted RBP10.54□□□□□ -0.72
GYPC-203ENST00000409836 OR10J1P30954 320 aa10.54□□□□□ -0.72
GYPC-203ENST00000409836 TOMM20LQ6UXN7 152 aa10.54□□□□□ -0.72
GYPC-203ENST00000409836 TMEM14EPQ6UXP3 125 aa10.54□□□□□ -0.72
GYPC-203ENST00000409836 Q8N1Y9 231 aa10.54□□□□□ -0.72
GYPC-203ENST00000409836 THAP8Q8NA92 274 aa10.54□□□□□ -0.72
GYPC-203ENST00000409836 VSIRQ9H7M9 311 aa10.54□□□□□ -0.72
GYPC-203ENST00000409836 DNAH9Q9NYC9 4486 aa10.54□□□□□ -0.72
GYPC-203ENST00000409836 STAB2Q8WWQ8 2551 aa10.53□□□□□ -0.72
GYPC-203ENST00000409836 IGKV1D-37A0A075B6S9 117 aa10.53□□□□□ -0.72
GYPC-203ENST00000409836 ZNF785A8K8V0 405 aa10.53□□□□□ -0.72
GYPC-203ENST00000409836 WRBO00258 174 aa10.53□□□□□ -0.72
GYPC-203ENST00000409836 CCSO14618 274 aa10.53□□□□□ -0.72
GYPC-203ENST00000409836 TSPAN4O14817 238 aa10.53□□□□□ -0.72
GYPC-203ENST00000409836 SSSCA1O60232 199 aa10.53□□□□□ -0.72
GYPC-203ENST00000409836 IFNA4P05014 189 aa10.53□□□□□ -0.72
GYPC-203ENST00000409836 CRYBB3P26998 211 aa10.53□□□□□ -0.72
GYPC-203ENST00000409836 GAMTQ14353 236 aa10.53□□□□□ -0.72
GYPC-203ENST00000409836 BTNL8Q6UX41 500 aa10.53□□□□□ -0.72
GYPC-203ENST00000409836 C2orf50Q96LR7 162 aa10.53□□□□□ -0.72
GYPC-203ENST00000409836 SPAG8Q99932 426 aaPredicted RBP10.53□□□□□ -0.72
GYPC-203ENST00000409836 B9D2Q9BPU9 175 aa10.53□□□□□ -0.72
GYPC-203ENST00000409836 SMPXQ9UHP9 88 aa10.53□□□□□ -0.72
GYPC-203ENST00000409836 STRAPQ9Y3F4 350 aaKnown RBP10.53□□□□□ -0.72
GYPC-203ENST00000409836 PUS1Q9Y606 427 aaKnown RBP eCLIP10.53□□□□□ -0.72
GYPC-203ENST00000409836 TOMM40O96008 361 aa10.52□□□□□ -0.73
GYPC-203ENST00000409836 CD5P06127 495 aa10.52□□□□□ -0.73
GYPC-203ENST00000409836 NPIPB3Q92617 1050 aa10.52□□□□□ -0.73
GYPC-203ENST00000409836 SLC35E1Q96K37 410 aa10.52□□□□□ -0.73
GYPC-203ENST00000409836 FAM110AQ9BQ89 295 aa10.52□□□□□ -0.73
GYPC-203ENST00000409836 SMAD5-AS1Q9Y6J3 95 aa10.52□□□□□ -0.73
GYPC-203ENST00000409836 U3KQE9 123 aa10.52□□□□□ -0.73
GYPC-203ENST00000409836 IGKV1OR2-108A0A075B7D4 117 aa10.51□□□□□ -0.73
GYPC-203ENST00000409836 K7EPK0 472 aa10.51□□□□□ -0.73
GYPC-203ENST00000409836 CHEK1O14757 476 aa10.51□□□□□ -0.73
GYPC-203ENST00000409836 BMI1P35226 326 aa10.51□□□□□ -0.73
GYPC-203ENST00000409836 TIGITQ495A1 244 aa10.51□□□□□ -0.73
GYPC-203ENST00000409836 SPANXN5Q5MJ07 72 aa10.51□□□□□ -0.73
GYPC-203ENST00000409836 FAM90A2PQ658T7 463 aa10.51□□□□□ -0.73
GYPC-203ENST00000409836 GSG1LQ6UXU4 331 aa10.51□□□□□ -0.73
GYPC-203ENST00000409836 GTSCR1Q86UQ5 136 aa10.51□□□□□ -0.73
GYPC-203ENST00000409836 WDR89Q96FK6 387 aaPredicted RBP10.51□□□□□ -0.73
GYPC-203ENST00000409836 ACY3Q96HD9 319 aa10.51□□□□□ -0.73
GYPC-203ENST00000409836 TRGV9Q99603 122 aa10.51□□□□□ -0.73
GYPC-203ENST00000409836 C20orf24Q9BUV8 137 aa10.51□□□□□ -0.73
GYPC-203ENST00000409836 PSENENQ9NZ42 101 aa10.51□□□□□ -0.73
GYPC-203ENST00000409836 TRAV14DV4A0A0A6YYC5 116 aa10.5□□□□□ -0.73
GYPC-203ENST00000409836 H3BP45 60 aa10.5□□□□□ -0.73
GYPC-203ENST00000409836 DLK1P80370 383 aa10.5□□□□□ -0.73
GYPC-203ENST00000409836 ACOT7LQ6ZUV0 252 aa10.5□□□□□ -0.73
GYPC-203ENST00000409836 GGACTQ9BVM4 153 aa10.5□□□□□ -0.73
GYPC-203ENST00000409836 RHPN1-AS1Q9BWJ2 59 aa10.5□□□□□ -0.73
GYPC-203ENST00000409836 NMES1Q9C002 83 aa10.5□□□□□ -0.73
GYPC-203ENST00000409836 C19orf73Q9NVV2 129 aa10.5□□□□□ -0.73
GYPC-203ENST00000409836 IGHV3OR16-8A0A075B7F1 116 aa10.49□□□□□ -0.73
GYPC-203ENST00000409836 TRAV2A0A0B4J234 112 aa10.49□□□□□ -0.73
GYPC-203ENST00000409836 C5orf51A6NDU8 294 aa10.49□□□□□ -0.73
GYPC-203ENST00000409836 YIF1AO95070 293 aa10.49□□□□□ -0.73
GYPC-203ENST00000409836 OR8G2PQ6IF36 304 aa10.49□□□□□ -0.73
GYPC-203ENST00000409836 TMEM144Q7Z5S9 345 aa10.49□□□□□ -0.73
GYPC-203ENST00000409836 METTL26Q96S19 204 aa10.49□□□□□ -0.73
GYPC-203ENST00000409836 GSKIPQ9P0R6 139 aa10.49□□□□□ -0.73
GYPC-203ENST00000409836 ZNF207O43670 478 aaKnown RBP10.48□□□□□ -0.73
GYPC-203ENST00000409836 SCGB1D2O95969 90 aa10.48□□□□□ -0.73
GYPC-203ENST00000409836 CFDP00746 253 aaPredicted RBP10.48□□□□□ -0.73
GYPC-203ENST00000409836 FABP1P07148 127 aa10.48□□□□□ -0.73
GYPC-203ENST00000409836 RD3LP0DJH9 198 aa10.48□□□□□ -0.73
GYPC-203ENST00000409836 IGHV4-30-4P0DP06 118 aa10.48□□□□□ -0.73
GYPC-203ENST00000409836 PSG1P11464 419 aa10.48□□□□□ -0.73
GYPC-203ENST00000409836 H2BFSP57053 126 aa10.48□□□□□ -0.73
GYPC-203ENST00000409836 CYCSP99999 105 aaKnown RBP10.48□□□□□ -0.73
GYPC-203ENST00000409836 USF2Q15853 346 aaPredicted RBP10.48□□□□□ -0.73
GYPC-203ENST00000409836 LAMTOR1Q6IAA8 161 aa10.48□□□□□ -0.73
GYPC-203ENST00000409836 OR51G1Q8NGK1 321 aa10.48□□□□□ -0.73
GYPC-203ENST00000409836 Q8WTZ3 238 aa10.48□□□□□ -0.73
GYPC-203ENST00000409836 RNF2Q99496 336 aa10.48□□□□□ -0.73
GYPC-203ENST00000409836 TMEM231Q9H6L2 316 aa10.48□□□□□ -0.73
GYPC-203ENST00000409836 LYRM2Q9NU23 88 aaPredicted RBP10.48□□□□□ -0.73
GYPC-203ENST00000409836 TENM3Q9P273 2699 aa10.47□□□□□ -0.73
GYPC-203ENST00000409836 A0A1W2PS18 150 aa10.47□□□□□ -0.73
GYPC-203ENST00000409836 FAM25EA8MYX2 175 aa10.47□□□□□ -0.73
GYPC-203ENST00000409836 DEDDO75618 318 aa10.47□□□□□ -0.73
GYPC-203ENST00000409836 NPPCP23582 126 aa10.47□□□□□ -0.73
GYPC-203ENST00000409836 NUP62P37198 522 aaPredicted RBP10.47□□□□□ -0.73
GYPC-203ENST00000409836 CD81P60033 236 aa10.47□□□□□ -0.73
GYPC-203ENST00000409836 RAB32Q13637 225 aa10.47□□□□□ -0.73
GYPC-203ENST00000409836 LINC00322Q6ZN03 302 aaPredicted RBP10.47□□□□□ -0.73
GYPC-203ENST00000409836 RBPMS2Q6ZRY4 209 aaKnown RBP10.47□□□□□ -0.73
GYPC-203ENST00000409836 ST8SIA2Q92186 375 aa10.47□□□□□ -0.73
GYPC-203ENST00000409836 RNF125Q96EQ8 232 aa10.47□□□□□ -0.73
GYPC-203ENST00000409836 NEURL2Q9BR09 285 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 129.7 ms