RNA–Protein interactions for RNA: ENST00000400183.6

USP25-204, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 1 (best) BASIC

Gene USP25, Length 5,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-204ENST00000400183 SRSF7Q16629 238 aaKnown RBP eCLIP15.34■□□□□ 0.05
USP25-204ENST00000400183 C10orf126Q8N4M7 172 aa15.34■□□□□ 0.05
USP25-204ENST00000400183 OR5AN1Q8NGI8 311 aa15.34■□□□□ 0.05
USP25-204ENST00000400183 NXT2Q9NPJ8 142 aaKnown RBP15.34■□□□□ 0.05
USP25-204ENST00000400183 ZNF257Q9Y2Q1 563 aa15.34■□□□□ 0.05
USP25-204ENST00000400183 LAMTOR2Q9Y2Q5 125 aa15.34■□□□□ 0.05
USP25-204ENST00000400183 EFNA2O43921 213 aa15.33■□□□□ 0.05
USP25-204ENST00000400183 MST1P26927 711 aa15.33■□□□□ 0.05
USP25-204ENST00000400183 FOXF2Q12947 444 aa15.33■□□□□ 0.05
USP25-204ENST00000400183 HBDP02042 147 aa15.33■□□□□ 0.04
USP25-204ENST00000400183 SRSF1Q07955 248 aaKnown RBP eCLIP15.33■□□□□ 0.04
USP25-204ENST00000400183 TMEM42Q69YG0 159 aa15.33■□□□□ 0.04
USP25-204ENST00000400183 GGNQ86UU5 652 aa15.33■□□□□ 0.04
USP25-204ENST00000400183 A0A1B0GV72 72 aa15.33■□□□□ 0.04
USP25-204ENST00000400183 IL18BPO95998 194 aa15.33■□□□□ 0.04
USP25-204ENST00000400183 PAX8Q06710 450 aa15.33■□□□□ 0.04
USP25-204ENST00000400183 METRNQ9UJH8 293 aa15.33■□□□□ 0.04
USP25-204ENST00000400183 CYSLTR1Q9Y271 337 aa15.33■□□□□ 0.04
USP25-204ENST00000400183 SPCS1Q9Y6A9 102 aa15.33■□□□□ 0.04
USP25-204ENST00000400183 FAM166AQ6J272 317 aa15.33■□□□□ 0.04
USP25-204ENST00000400183 C8orf46Q8TAG6 207 aa15.33■□□□□ 0.04
USP25-204ENST00000400183 GFI1Q99684 422 aa15.33■□□□□ 0.04
USP25-204ENST00000400183 PLSCR4Q9NRQ2 329 aa15.33■□□□□ 0.04
USP25-204ENST00000400183 KIF26BQ2KJY2 2108 aa15.32■□□□□ 0.04
USP25-204ENST00000400183 TRAV40A0A0B4J280 105 aa15.32■□□□□ 0.04
USP25-204ENST00000400183 HIST1H2BLQ99880 126 aa15.32■□□□□ 0.04
USP25-204ENST00000400183 FOXG1P55316 489 aaPredicted RBP15.32■□□□□ 0.04
USP25-204ENST00000400183 ZNF672Q499Z4 452 aaPredicted RBP15.32■□□□□ 0.04
USP25-204ENST00000400183 OCC1Q8TAD7 63 aa15.32■□□□□ 0.04
USP25-204ENST00000400183 MBD3L1Q8WWY6 194 aa15.32■□□□□ 0.04
USP25-204ENST00000400183 ADMP35318 185 aa15.32■□□□□ 0.04
USP25-204ENST00000400183 BRCA1P38398 1863 aaKnown RBP15.32■□□□□ 0.04
USP25-204ENST00000400183 NABP1Q96AH0 204 aa15.32■□□□□ 0.04
USP25-204ENST00000400183 RIF1Q5UIP0 2472 aaKnown RBP15.31■□□□□ 0.04
USP25-204ENST00000400183 GAS1P54826 345 aa15.31■□□□□ 0.04
USP25-204ENST00000400183 GFI1BQ5VTD9 330 aa15.31■□□□□ 0.04
USP25-204ENST00000400183 TRGV11A0A075B6L2 103 aa15.31■□□□□ 0.04
USP25-204ENST00000400183 OVOL1O14753 267 aa15.31■□□□□ 0.04
USP25-204ENST00000400183 CD5P06127 495 aa15.31■□□□□ 0.04
USP25-204ENST00000400183 MALP21145 153 aa15.31■□□□□ 0.04
USP25-204ENST00000400183 ORMDL2Q53FV1 153 aa15.31■□□□□ 0.04
USP25-204ENST00000400183 NUDT10Q8NFP7 164 aa15.31■□□□□ 0.04
USP25-204ENST00000400183 COQ2Q96H96 371 aa15.31■□□□□ 0.04
USP25-204ENST00000400183 GHRHP01286 108 aa15.3■□□□□ 0.04
USP25-204ENST00000400183 LINC00614P0C842 121 aa15.3■□□□□ 0.04
USP25-204ENST00000400183 HIST3H2BBQ8N257 126 aa15.3■□□□□ 0.04
USP25-204ENST00000400183 PLXNA1Q9UIW2 1896 aa15.3■□□□□ 0.04
USP25-204ENST00000400183 LY6DQ14210 128 aa15.3■□□□□ 0.04
USP25-204ENST00000400183 TEX38Q6PEX7 206 aa15.3■□□□□ 0.04
USP25-204ENST00000400183 OR10W1Q8NGF6 305 aa15.3■□□□□ 0.04
USP25-204ENST00000400183 CLDN16Q9Y5I7 305 aa15.3■□□□□ 0.04
USP25-204ENST00000400183 NCOR1O75376 2440 aa15.3■□□□□ 0.04
USP25-204ENST00000400183 WFDC1Q9HC57 220 aa15.3■□□□□ 0.04
USP25-204ENST00000400183 IGHV2-26A0A0B4J1V2 119 aa15.3■□□□□ 0.04
USP25-204ENST00000400183 TRAV41A0A0B4J266 112 aa15.3■□□□□ 0.04
USP25-204ENST00000400183 F2Z2F3 143 aa15.3■□□□□ 0.04
USP25-204ENST00000400183 TREML4Q6UXN2 200 aa15.3■□□□□ 0.04
USP25-204ENST00000400183 TSKUQ8WUA8 353 aa15.29■□□□□ 0.04
USP25-204ENST00000400183 C5orf30Q96GV9 206 aa15.29■□□□□ 0.04
USP25-204ENST00000400183 PGPEP1LA6NFU8 196 aa15.29■□□□□ 0.04
USP25-204ENST00000400183 NDUFS6O75380 124 aaKnown RBP15.29■□□□□ 0.04
USP25-204ENST00000400183 DPM2O94777 84 aa15.29■□□□□ 0.04
USP25-204ENST00000400183 TYMSP04818 313 aa15.29■□□□□ 0.04
USP25-204ENST00000400183 PPIFP30405 207 aaKnown RBP15.29■□□□□ 0.04
USP25-204ENST00000400183 LHFPL1Q86WI0 220 aa15.29■□□□□ 0.04
USP25-204ENST00000400183 ZNF236Q9UL36 1845 aa15.29■□□□□ 0.04
USP25-204ENST00000400183 TRGV4A0A0C4DH28 118 aa15.29■□□□□ 0.04
USP25-204ENST00000400183 DSCR9P59020 149 aa15.29■□□□□ 0.04
USP25-204ENST00000400183 C17orf82Q86X59 251 aaPredicted RBP15.29■□□□□ 0.04
USP25-204ENST00000400183 SEPSECSQ9HD40 501 aaKnown RBP15.29■□□□□ 0.04
USP25-204ENST00000400183 ARID2Q68CP9 1835 aa15.29■□□□□ 0.04
USP25-204ENST00000400183 TAF1LQ8IZX4 1826 aa15.29■□□□□ 0.04
USP25-204ENST00000400183 TMEM190Q8WZ59 177 aa15.29■□□□□ 0.04
USP25-204ENST00000400183 GNB1LQ9BYB4 327 aa15.29■□□□□ 0.04
USP25-204ENST00000400183 PATJQ8NI35 1801 aa15.28■□□□□ 0.04
USP25-204ENST00000400183 ZNF585BQ52M93 769 aa15.28■□□□□ 0.04
USP25-204ENST00000400183 IGKV3D-20A0A0C4DH25 116 aa15.28■□□□□ 0.04
USP25-204ENST00000400183 CXCL1P09341 107 aa15.28■□□□□ 0.04
USP25-204ENST00000400183 EFNA4P52798 201 aa15.28■□□□□ 0.04
USP25-204ENST00000400183 C10orf55Q5SWW7 151 aa15.28■□□□□ 0.04
USP25-204ENST00000400183 SIGLEC15Q6ZMC9 328 aa15.28■□□□□ 0.04
USP25-204ENST00000400183 KIR3DL3Q8N743 410 aa15.28■□□□□ 0.04
USP25-204ENST00000400183 SCN8AQ9UQD0 1980 aa15.28■□□□□ 0.04
USP25-204ENST00000400183 SELLP14151 372 aa15.28■□□□□ 0.04
USP25-204ENST00000400183 GGTLC1Q9BX51 225 aa15.28■□□□□ 0.04
USP25-204ENST00000400183 A6NNC1 897 aa15.27■□□□□ 0.04
USP25-204ENST00000400183 RNF182Q8N6D2 247 aa15.27■□□□□ 0.04
USP25-204ENST00000400183 FAM169BQ8N8A8 192 aa15.27■□□□□ 0.04
USP25-204ENST00000400183 PGPEP1Q9NXJ5 209 aa15.27■□□□□ 0.04
USP25-204ENST00000400183 POLEQ07864 2286 aa15.27■□□□□ 0.04
USP25-204ENST00000400183 IGHV1-8P0DP01 117 aa15.27■□□□□ 0.04
USP25-204ENST00000400183 BEND2Q8NDZ0 799 aa15.27■□□□□ 0.04
USP25-204ENST00000400183 MBNL3Q9NUK0 354 aaKnown RBP15.27■□□□□ 0.03
USP25-204ENST00000400183 LINC00527Q9UJ94 153 aa15.27■□□□□ 0.03
USP25-204ENST00000400183 VSIRQ9H7M9 311 aa15.27■□□□□ 0.03
USP25-204ENST00000400183 OOSP1A8MZH6 123 aa15.26■□□□□ 0.03
USP25-204ENST00000400183 PSPNO60542 156 aa15.26■□□□□ 0.03
USP25-204ENST00000400183 ATP5L2Q7Z4Y8 100 aa15.26■□□□□ 0.03
USP25-204ENST00000400183 DOCK4Q8N1I0 1966 aa15.26■□□□□ 0.03
USP25-204ENST00000400183 TRAV9-2A0A087WT02 112 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms