RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 FAM110DQ8TAY7 271 aaPredicted RBP11.42□□□□□ -0.58
VAPA-202ENST00000400000 NAA38Q9BRA0 125 aaKnown RBP11.42□□□□□ -0.58
VAPA-202ENST00000400000 RPUSD1Q9UJJ7 312 aaKnown RBP11.42□□□□□ -0.58
VAPA-202ENST00000400000 H3BUX3 64 aa11.42□□□□□ -0.58
VAPA-202ENST00000400000 ZNF525Q8N782 197 aa11.42□□□□□ -0.58
VAPA-202ENST00000400000 RCHY1Q96PM5 261 aa11.42□□□□□ -0.58
VAPA-202ENST00000400000 NHP2Q9NX24 153 aaKnown RBP11.42□□□□□ -0.58
VAPA-202ENST00000400000 ZDBF2Q9HCK1 2354 aa11.42□□□□□ -0.58
VAPA-202ENST00000400000 CKS1BP61024 79 aa11.42□□□□□ -0.58
VAPA-202ENST00000400000 PQLC2LA1A4F0 135 aa11.41□□□□□ -0.58
VAPA-202ENST00000400000 Q0VFX4 171 aa11.41□□□□□ -0.58
VAPA-202ENST00000400000 Q5PR19 223 aa11.41□□□□□ -0.58
VAPA-202ENST00000400000 ORMDL3Q8N138 153 aa11.41□□□□□ -0.58
VAPA-202ENST00000400000 DOCK6Q96HP0 2047 aa11.41□□□□□ -0.58
VAPA-202ENST00000400000 UPK2O00526 184 aa11.41□□□□□ -0.58
VAPA-202ENST00000400000 PAX1P15863 534 aa11.41□□□□□ -0.58
VAPA-202ENST00000400000 TTC9CQ8N5M4 171 aa11.41□□□□□ -0.58
VAPA-202ENST00000400000 WBP1Q96G27 269 aa11.41□□□□□ -0.58
VAPA-202ENST00000400000 TMEM8BA6NDV4 472 aa11.41□□□□□ -0.58
VAPA-202ENST00000400000 DEFB130BP0DP73 79 aa11.41□□□□□ -0.58
VAPA-202ENST00000400000 DEFB130AP0DP74 79 aa11.41□□□□□ -0.58
VAPA-202ENST00000400000 COL24A1Q17RW2 1714 aa11.41□□□□□ -0.58
VAPA-202ENST00000400000 SDK2Q58EX2 2172 aa11.41□□□□□ -0.58
VAPA-202ENST00000400000 H3BUT2 72 aa11.41□□□□□ -0.58
VAPA-202ENST00000400000 FAM166AQ6J272 317 aa11.41□□□□□ -0.58
VAPA-202ENST00000400000 VSIRQ9H7M9 311 aa11.41□□□□□ -0.58
VAPA-202ENST00000400000 C15orf32Q32M92 178 aa11.4□□□□□ -0.58
VAPA-202ENST00000400000 GREB1Q4ZG55 1949 aa11.4□□□□□ -0.58
VAPA-202ENST00000400000 INTS1Q8N201 2190 aaKnown RBP11.4□□□□□ -0.58
VAPA-202ENST00000400000 A0A087WX48 190 aa11.4□□□□□ -0.58
VAPA-202ENST00000400000 IGLV3-21P80748 117 aaPredicted RBP11.4□□□□□ -0.58
VAPA-202ENST00000400000 TMEM200BQ69YZ2 307 aa11.4□□□□□ -0.58
VAPA-202ENST00000400000 GATA4P43694 442 aa11.4□□□□□ -0.58
VAPA-202ENST00000400000 CACNA1DQ01668 2161 aa11.4□□□□□ -0.58
VAPA-202ENST00000400000 MBNL3Q9NUK0 354 aaKnown RBP11.4□□□□□ -0.58
VAPA-202ENST00000400000 FANCMQ8IYD8 2048 aa11.4□□□□□ -0.58
VAPA-202ENST00000400000 TRAV41A0A0B4J266 112 aa11.4□□□□□ -0.58
VAPA-202ENST00000400000 A0A0G2JNJ9 132 aa11.4□□□□□ -0.58
VAPA-202ENST00000400000 FABP5P3A8MUU1 101 aa11.4□□□□□ -0.58
VAPA-202ENST00000400000 INS-IGF2F8WCM5 200 aa11.4□□□□□ -0.58
VAPA-202ENST00000400000 INSP01308 110 aa11.4□□□□□ -0.58
VAPA-202ENST00000400000 CITED2Q99967 270 aaPredicted RBP11.4□□□□□ -0.58
VAPA-202ENST00000400000 SCRT1Q9BWW7 348 aa11.4□□□□□ -0.58
VAPA-202ENST00000400000 Q9UFV3 132 aa11.4□□□□□ -0.58
VAPA-202ENST00000400000 UCP3P55916 312 aa11.4□□□□□ -0.58
VAPA-202ENST00000400000 SPATA31B1PQ5VZV4 182 aa11.4□□□□□ -0.58
VAPA-202ENST00000400000 CHTOPQ9Y3Y2 248 aaKnown RBP11.4□□□□□ -0.58
VAPA-202ENST00000400000 Q8TAT8 98 aa11.4□□□□□ -0.59
VAPA-202ENST00000400000 SLC25A15Q9Y619 301 aa11.4□□□□□ -0.59
VAPA-202ENST00000400000 BRCA1P38398 1863 aaKnown RBP11.39□□□□□ -0.59
VAPA-202ENST00000400000 PMS2P5A8MQ11 134 aa11.39□□□□□ -0.59
VAPA-202ENST00000400000 RFNGQ9Y644 331 aa11.39□□□□□ -0.59
VAPA-202ENST00000400000 ZNRD1Q9P1U0 126 aa11.39□□□□□ -0.59
VAPA-202ENST00000400000 ZNF319Q9P2F9 582 aa11.39□□□□□ -0.59
VAPA-202ENST00000400000 DIDO1Q9BTC0 2240 aaKnown RBP11.39□□□□□ -0.59
VAPA-202ENST00000400000 CDK2AP2O75956 126 aa11.39□□□□□ -0.59
VAPA-202ENST00000400000 SMDT1Q9H4I9 107 aa11.39□□□□□ -0.59
VAPA-202ENST00000400000 IGHV2-26A0A0B4J1V2 119 aa11.39□□□□□ -0.59
VAPA-202ENST00000400000 SP5Q6BEB4 398 aaPredicted RBP11.39□□□□□ -0.59
VAPA-202ENST00000400000 SBF2Q86WG5 1849 aa11.38□□□□□ -0.59
VAPA-202ENST00000400000 OTORQ9NRC9 128 aa11.38□□□□□ -0.59
VAPA-202ENST00000400000 SPCS1Q9Y6A9 102 aa11.38□□□□□ -0.59
VAPA-202ENST00000400000 PSG8Q9UQ74 426 aa11.38□□□□□ -0.59
VAPA-202ENST00000400000 IZUMO1RA6ND01 250 aa11.38□□□□□ -0.59
VAPA-202ENST00000400000 SERF1AO75920 110 aa11.38□□□□□ -0.59
VAPA-202ENST00000400000 ZNF883P0CG24 379 aa11.38□□□□□ -0.59
VAPA-202ENST00000400000 ZNF497Q6ZNH5 498 aa11.38□□□□□ -0.59
VAPA-202ENST00000400000 LILRA1O75019 489 aa11.38□□□□□ -0.59
VAPA-202ENST00000400000 LURAP1LQ8IV03 231 aa11.38□□□□□ -0.59
VAPA-202ENST00000400000 RNF182Q8N6D2 247 aa11.38□□□□□ -0.59
VAPA-202ENST00000400000 TRAV3A0A0B4J244 114 aa11.38□□□□□ -0.59
VAPA-202ENST00000400000 MRPL14Q6P1L8 145 aaKnown RBP11.38□□□□□ -0.59
VAPA-202ENST00000400000 TM2D1Q9BX74 207 aa11.38□□□□□ -0.59
VAPA-202ENST00000400000 A0A0A6YYD4 124 aa11.38□□□□□ -0.59
VAPA-202ENST00000400000 IGHV3-16A0A0C4DH30 117 aa11.38□□□□□ -0.59
VAPA-202ENST00000400000 C15orf61A6NNL5 157 aa11.38□□□□□ -0.59
VAPA-202ENST00000400000 TCRAP04437 139 aa11.38□□□□□ -0.59
VAPA-202ENST00000400000 TRBV9A0A0B4J1U6 114 aa11.37□□□□□ -0.59
VAPA-202ENST00000400000 SAMD13Q5VXD3 122 aa11.37□□□□□ -0.59
VAPA-202ENST00000400000 A0A087WWL8 130 aa11.37□□□□□ -0.59
VAPA-202ENST00000400000 Q96MF0 132 aa11.37□□□□□ -0.59
VAPA-202ENST00000400000 MCRIP2Q9BUT9 160 aaKnown RBP11.37□□□□□ -0.59
VAPA-202ENST00000400000 CIARTQ8N365 385 aaPredicted RBP11.37□□□□□ -0.59
VAPA-202ENST00000400000 EPDR1Q9UM22 224 aa11.37□□□□□ -0.59
VAPA-202ENST00000400000 E9PLN8 166 aa11.37□□□□□ -0.59
VAPA-202ENST00000400000 COL8A2P25067 703 aa11.37□□□□□ -0.59
VAPA-202ENST00000400000 CA7P43166 264 aa11.37□□□□□ -0.59
VAPA-202ENST00000400000 XIRP1Q702N8 1843 aaKnown RBP11.37□□□□□ -0.59
VAPA-202ENST00000400000 IGKV1D-8A0A087WSZ0 117 aa11.36□□□□□ -0.59
VAPA-202ENST00000400000 NHLRC3Q5JS37 347 aa11.36□□□□□ -0.59
VAPA-202ENST00000400000 PIP4P2Q8N4L2 257 aa11.36□□□□□ -0.59
VAPA-202ENST00000400000 MEGF9Q9H1U4 602 aa11.36□□□□□ -0.59
VAPA-202ENST00000400000 MYO7BQ6PIF6 2116 aa11.36□□□□□ -0.59
VAPA-202ENST00000400000 PAX4O43316 350 aa11.36□□□□□ -0.59
VAPA-202ENST00000400000 SRP19P09132 144 aaKnown RBP11.36□□□□□ -0.59
VAPA-202ENST00000400000 A0A096LPF7 62 aa11.36□□□□□ -0.59
VAPA-202ENST00000400000 CCL1P22362 96 aa11.36□□□□□ -0.59
VAPA-202ENST00000400000 LAIR2Q6ISS4 152 aa11.36□□□□□ -0.59
VAPA-202ENST00000400000 LYPD2Q6UXB3 125 aa11.36□□□□□ -0.59
VAPA-202ENST00000400000 PRADC1Q9BSG0 188 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms