RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 HTR1DP28221 377 aa13.96□□□□□ -0.18
PTPRA-205ENST00000399903 PROP1O75360 226 aa13.95□□□□□ -0.18
PTPRA-205ENST00000399903 DEFB109BQ30KR1 87 aa13.95□□□□□ -0.18
PTPRA-205ENST00000399903 TM4SF20Q53R12 229 aa13.95□□□□□ -0.18
PTPRA-205ENST00000399903 BPIFA4PQ86YQ2 179 aa13.95□□□□□ -0.18
PTPRA-205ENST00000399903 ZNF503Q96F45 646 aa13.95□□□□□ -0.18
PTPRA-205ENST00000399903 LSM4Q9Y4Z0 139 aaKnown RBP13.95□□□□□ -0.18
PTPRA-205ENST00000399903 IGHV1-24A0A0C4DH33 117 aa13.95□□□□□ -0.18
PTPRA-205ENST00000399903 A0A1W2PRE2 83 aa13.95□□□□□ -0.18
PTPRA-205ENST00000399903 AGFG2O95081 481 aa13.95□□□□□ -0.18
PTPRA-205ENST00000399903 ARF6P62330 175 aa13.95□□□□□ -0.18
PTPRA-205ENST00000399903 MAP1LC3CQ9BXW4 147 aa13.95□□□□□ -0.18
PTPRA-205ENST00000399903 TAS2R45P59539 299 aa13.95□□□□□ -0.18
PTPRA-205ENST00000399903 ZNF146Q15072 292 aa13.95□□□□□ -0.18
PTPRA-205ENST00000399903 SLC35E4Q6ICL7 350 aa13.94□□□□□ -0.18
PTPRA-205ENST00000399903 BHLHA15Q7RTS1 189 aaPredicted RBP13.94□□□□□ -0.18
PTPRA-205ENST00000399903 TEX45Q8NA69 505 aa13.94□□□□□ -0.18
PTPRA-205ENST00000399903 CIDEAO60543 219 aa13.93□□□□□ -0.18
PTPRA-205ENST00000399903 TBC1D28Q2M2D7 210 aa13.93□□□□□ -0.18
PTPRA-205ENST00000399903 PLXNB1O43157 2135 aa13.93□□□□□ -0.18
PTPRA-205ENST00000399903 CHEK1O14757 476 aa13.93□□□□□ -0.18
PTPRA-205ENST00000399903 EIF4EBP1Q13541 118 aaPredicted RBP13.93□□□□□ -0.18
PTPRA-205ENST00000399903 UTF1Q5T230 341 aa13.93□□□□□ -0.18
PTPRA-205ENST00000399903 FAM71F2Q6NXP2 309 aa13.93□□□□□ -0.18
PTPRA-205ENST00000399903 TPPP3Q9BW30 176 aa13.93□□□□□ -0.18
PTPRA-205ENST00000399903 PLCE1Q9P212 2302 aa13.93□□□□□ -0.18
PTPRA-205ENST00000399903 PKDREJQ9NTG1 2253 aa13.93□□□□□ -0.18
PTPRA-205ENST00000399903 CD5LO43866 347 aa13.93□□□□□ -0.18
PTPRA-205ENST00000399903 ERVK11-1P61568 191 aa13.93□□□□□ -0.18
PTPRA-205ENST00000399903 URB1-AS1Q96HZ7 61 aa13.93□□□□□ -0.18
PTPRA-205ENST00000399903 PRSS46E5RG02 174 aa13.92□□□□□ -0.18
PTPRA-205ENST00000399903 COMMD5Q9GZQ3 224 aa13.92□□□□□ -0.18
PTPRA-205ENST00000399903 IGKV1OR2-108A0A075B7D4 117 aa13.92□□□□□ -0.18
PTPRA-205ENST00000399903 IGHV3OR15-7A0A075B7D8 119 aa13.92□□□□□ -0.18
PTPRA-205ENST00000399903 OR4S2Q8NH73 311 aa13.92□□□□□ -0.18
PTPRA-205ENST00000399903 C8orf88P0DMB2 117 aa13.92□□□□□ -0.18
PTPRA-205ENST00000399903 HIST1H1EP10412 219 aaKnown RBP13.92□□□□□ -0.18
PTPRA-205ENST00000399903 TMEM108Q6UXF1 575 aa13.92□□□□□ -0.18
PTPRA-205ENST00000399903 VWC2LB2RUY7 222 aa13.91□□□□□ -0.18
PTPRA-205ENST00000399903 SMPD2O60906 423 aa13.91□□□□□ -0.18
PTPRA-205ENST00000399903 IGLC1P0CG04 106 aa13.91□□□□□ -0.18
PTPRA-205ENST00000399903 MPV17P39210 176 aa13.91□□□□□ -0.18
PTPRA-205ENST00000399903 SMIM21Q3B7S5 101 aa13.91□□□□□ -0.18
PTPRA-205ENST00000399903 GTF2H5Q6ZYL4 71 aa13.91□□□□□ -0.18
PTPRA-205ENST00000399903 GRAMD2BQ96HH9 432 aa13.91□□□□□ -0.18
PTPRA-205ENST00000399903 IGF2BP2-AS1Q96M15 143 aa13.91□□□□□ -0.18
PTPRA-205ENST00000399903 J3QR06 171 aa13.91□□□□□ -0.18
PTPRA-205ENST00000399903 KLK10O43240 276 aa13.91□□□□□ -0.18
PTPRA-205ENST00000399903 PRR20EP86478 221 aa13.91□□□□□ -0.18
PTPRA-205ENST00000399903 PRR20CP86479 221 aa13.91□□□□□ -0.18
PTPRA-205ENST00000399903 PRR20DP86480 221 aa13.91□□□□□ -0.18
PTPRA-205ENST00000399903 PRR20BP86481 221 aa13.91□□□□□ -0.18
PTPRA-205ENST00000399903 PRR20AP86496 221 aa13.91□□□□□ -0.18
PTPRA-205ENST00000399903 VWA1Q6PCB0 445 aa13.91□□□□□ -0.18
PTPRA-205ENST00000399903 OR8A1Q8NGG7 326 aa13.91□□□□□ -0.18
PTPRA-205ENST00000399903 LINC00470Q9BZP3 86 aa13.91□□□□□ -0.18
PTPRA-205ENST00000399903 NAV3Q8IVL0 2385 aa13.91□□□□□ -0.18
PTPRA-205ENST00000399903 TANC2Q9HCD6 1990 aa13.9□□□□□ -0.18
PTPRA-205ENST00000399903 SLC25A5P05141 298 aaKnown RBP13.9□□□□□ -0.18
PTPRA-205ENST00000399903 HIST1H1AQ02539 215 aaPredicted RBP13.9□□□□□ -0.18
PTPRA-205ENST00000399903 GTSF1LQ9H1H1 148 aa13.9□□□□□ -0.18
PTPRA-205ENST00000399903 OR51B2Q9Y5P1 312 aa13.9□□□□□ -0.18
PTPRA-205ENST00000399903 ZNF134P52741 427 aa13.9□□□□□ -0.18
PTPRA-205ENST00000399903 FXYD7P58549 80 aa13.9□□□□□ -0.18
PTPRA-205ENST00000399903 HSPE1P61604 102 aaKnown RBP13.9□□□□□ -0.18
PTPRA-205ENST00000399903 PAX2Q02962 417 aa13.9□□□□□ -0.18
PTPRA-205ENST00000399903 ZNF207O43670 478 aaKnown RBP13.9□□□□□ -0.18
PTPRA-205ENST00000399903 TIMM8AO60220 97 aaPredicted RBP13.9□□□□□ -0.18
PTPRA-205ENST00000399903 COX7A2P2O60397 106 aa13.9□□□□□ -0.18
PTPRA-205ENST00000399903 HLA-DRB1P01911 266 aa13.9□□□□□ -0.18
PTPRA-205ENST00000399903 PLP1P60201 277 aa13.9□□□□□ -0.18
PTPRA-205ENST00000399903 C5orf17Q8NAS9 161 aa13.9□□□□□ -0.18
PTPRA-205ENST00000399903 TMEM178AQ8NBL3 297 aa13.9□□□□□ -0.18
PTPRA-205ENST00000399903 HBBP68871 147 aa13.89□□□□□ -0.19
PTPRA-205ENST00000399903 SMAGPQ0VAQ4 97 aa13.89□□□□□ -0.19
PTPRA-205ENST00000399903 MRPL49Q13405 166 aaKnown RBP13.89□□□□□ -0.19
PTPRA-205ENST00000399903 TMEM97Q5BJF2 176 aa13.89□□□□□ -0.19
PTPRA-205ENST00000399903 OR10W1Q8NGF6 305 aa13.89□□□□□ -0.19
PTPRA-205ENST00000399903 TMUB1Q9BVT8 246 aa13.89□□□□□ -0.19
PTPRA-205ENST00000399903 F11RQ9Y624 299 aaKnown RBP13.89□□□□□ -0.19
PTPRA-205ENST00000399903 TLN1Q9Y490 2541 aaKnown RBP13.89□□□□□ -0.19
PTPRA-205ENST00000399903 PEX7O00628 323 aa13.89□□□□□ -0.19
PTPRA-205ENST00000399903 TMEM186Q96B77 213 aa13.89□□□□□ -0.19
PTPRA-205ENST00000399903 DAZAP1Q96EP5 407 aaKnown RBP13.89□□□□□ -0.19
PTPRA-205ENST00000399903 SCRT2Q9NQ03 307 aa13.89□□□□□ -0.19
PTPRA-205ENST00000399903 IGF2RP11717 2491 aa13.89□□□□□ -0.19
PTPRA-205ENST00000399903 IGHV1-2P23083 117 aa13.89□□□□□ -0.19
PTPRA-205ENST00000399903 ZNRF1Q8ND25 227 aa13.89□□□□□ -0.19
PTPRA-205ENST00000399903 ASCL2Q99929 193 aa13.89□□□□□ -0.19
PTPRA-205ENST00000399903 PAXXQ9BUH6 204 aa13.89□□□□□ -0.19
PTPRA-205ENST00000399903 SLC25A10Q9UBX3 287 aaPredicted RBP13.88□□□□□ -0.19
PTPRA-205ENST00000399903 NHLH1Q02575 133 aa13.88□□□□□ -0.19
PTPRA-205ENST00000399903 SAMD13Q5VXD3 122 aa13.88□□□□□ -0.19
PTPRA-205ENST00000399903 ACP7Q6ZNF0 438 aa13.88□□□□□ -0.19
PTPRA-205ENST00000399903 SLC25A33Q9BSK2 321 aa13.88□□□□□ -0.19
PTPRA-205ENST00000399903 KALRNO60229 2985 aa13.88□□□□□ -0.19
PTPRA-205ENST00000399903 LOC389332A0A1B0GUA5 103 aa13.87□□□□□ -0.19
PTPRA-205ENST00000399903 C15orf61A6NNL5 157 aa13.87□□□□□ -0.19
PTPRA-205ENST00000399903 SS18L1O75177 396 aaPredicted RBP13.87□□□□□ -0.19
PTPRA-205ENST00000399903 TMEM177Q53S58 311 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms