RNA–Protein interactions for RNA: ENST00000397728.7

LSS-202, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 4,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-202ENST00000397728 ZFYVE26Q68DK2 2539 aa12.55□□□□□ -0.4
LSS-202ENST00000397728 C9JCJ5 164 aa12.55□□□□□ -0.4
LSS-202ENST00000397728 ID3Q02535 119 aa12.55□□□□□ -0.4
LSS-202ENST00000397728 MBNL3Q9NUK0 354 aaKnown RBP12.55□□□□□ -0.4
LSS-202ENST00000397728 ISLRO14498 428 aa12.55□□□□□ -0.4
LSS-202ENST00000397728 IQCJQ1A5X6 159 aa12.55□□□□□ -0.4
LSS-202ENST00000397728 B4DEV8 164 aa12.55□□□□□ -0.4
LSS-202ENST00000397728 TEX36Q5VZQ5 186 aa12.55□□□□□ -0.4
LSS-202ENST00000397728 GLMPQ8WWB7 406 aa12.55□□□□□ -0.4
LSS-202ENST00000397728 HTN3P15516 51 aa12.55□□□□□ -0.4
LSS-202ENST00000397728 MIR17HGQ75NE6 70 aa12.55□□□□□ -0.4
LSS-202ENST00000397728 STHQ8IWL8 128 aa12.55□□□□□ -0.4
LSS-202ENST00000397728 SNURFLB1AK76 121 aa12.54□□□□□ -0.4
LSS-202ENST00000397728 J3QLI3 93 aa12.54□□□□□ -0.4
LSS-202ENST00000397728 VENTXO95231 258 aa12.54□□□□□ -0.4
LSS-202ENST00000397728 OR5AL1P0C617 328 aa12.54□□□□□ -0.4
LSS-202ENST00000397728 BEND2Q8NDZ0 799 aa12.54□□□□□ -0.4
LSS-202ENST00000397728 VPS25Q9BRG1 176 aa12.54□□□□□ -0.4
LSS-202ENST00000397728 RNF114Q9Y508 228 aa12.54□□□□□ -0.4
LSS-202ENST00000397728 TRAV34A0A0B4J273 112 aa12.54□□□□□ -0.4
LSS-202ENST00000397728 IGHV4-61A0A0C4DH41 118 aa12.54□□□□□ -0.4
LSS-202ENST00000397728 PRSS1P07477 247 aa12.54□□□□□ -0.4
LSS-202ENST00000397728 DANCRP0C864 163 aa12.54□□□□□ -0.4
LSS-202ENST00000397728 HERPUD1Q15011 391 aa12.54□□□□□ -0.4
LSS-202ENST00000397728 DEFB121Q5J5C9 76 aa12.54□□□□□ -0.4
LSS-202ENST00000397728 SAPCD1Q5SSQ6 148 aa12.54□□□□□ -0.4
LSS-202ENST00000397728 GTSCR1Q86UQ5 136 aa12.54□□□□□ -0.4
LSS-202ENST00000397728 TMEM116Q8NCL8 245 aa12.54□□□□□ -0.4
LSS-202ENST00000397728 IGHV4-30-2A0A087WSY4 118 aa12.54□□□□□ -0.4
LSS-202ENST00000397728 FAM90A9PA6NNJ1 464 aa12.54□□□□□ -0.4
LSS-202ENST00000397728 NMBP08949 121 aa12.54□□□□□ -0.4
LSS-202ENST00000397728 ERVK11-1P61568 191 aa12.54□□□□□ -0.4
LSS-202ENST00000397728 OR4C46A6NHA9 309 aa12.53□□□□□ -0.4
LSS-202ENST00000397728 FAM74A7A6NL05 159 aa12.53□□□□□ -0.4
LSS-202ENST00000397728 CCKARP32238 428 aa12.53□□□□□ -0.4
LSS-202ENST00000397728 COX19Q49B96 90 aa12.53□□□□□ -0.4
LSS-202ENST00000397728 DUX3Q96PT4 197 aa12.53□□□□□ -0.4
LSS-202ENST00000397728 IGHV4-39P01824 125 aa12.53□□□□□ -0.4
LSS-202ENST00000397728 SMDT1Q9H4I9 107 aa12.53□□□□□ -0.4
LSS-202ENST00000397728 IGKV1-5P01602 117 aa12.53□□□□□ -0.4
LSS-202ENST00000397728 CRISP2P16562 243 aa12.53□□□□□ -0.4
LSS-202ENST00000397728 LINC01587Q99440 93 aa12.53□□□□□ -0.4
LSS-202ENST00000397728 RNF224P0DH78 156 aa12.52□□□□□ -0.4
LSS-202ENST00000397728 RARRES2Q99969 163 aa12.52□□□□□ -0.4
LSS-202ENST00000397728 SPOCK3Q9BQ16 436 aa12.52□□□□□ -0.4
LSS-202ENST00000397728 CD33P20138 364 aa12.52□□□□□ -0.4
LSS-202ENST00000397728 CDC42EP3Q9UKI2 254 aa12.52□□□□□ -0.4
LSS-202ENST00000397728 C22orf46C9J442 243 aa12.52□□□□□ -0.41
LSS-202ENST00000397728 YTHDF2Q9Y5A9 579 aaKnown RBP12.52□□□□□ -0.41
LSS-202ENST00000397728 MYO9AB2RTY4 2548 aa12.52□□□□□ -0.41
LSS-202ENST00000397728 TCAPO15273 167 aa12.52□□□□□ -0.41
LSS-202ENST00000397728 JMJD1CQ15652 2540 aa12.52□□□□□ -0.41
LSS-202ENST00000397728 IGHV2-5P01817 119 aa12.51□□□□□ -0.41
LSS-202ENST00000397728 SNRPEP62304 92 aaKnown RBP12.51□□□□□ -0.41
LSS-202ENST00000397728 CEP192Q8TEP8 1941 aa12.51□□□□□ -0.41
LSS-202ENST00000397728 TMEM131Q92545 1883 aa12.51□□□□□ -0.41
LSS-202ENST00000397728 FAM53AQ6NSI3 398 aaPredicted RBP12.51□□□□□ -0.41
LSS-202ENST00000397728 IGKV1-6A0A0C4DH72 117 aa12.51□□□□□ -0.41
LSS-202ENST00000397728 CD99P14209 185 aa12.51□□□□□ -0.41
LSS-202ENST00000397728 AREGP15514 252 aa12.51□□□□□ -0.41
LSS-202ENST00000397728 SUPT4H1P63272 117 aaKnown RBP12.51□□□□□ -0.41
LSS-202ENST00000397728 DAZAP2Q15038 168 aaPredicted RBP12.51□□□□□ -0.41
LSS-202ENST00000397728 SAMD13Q5VXD3 122 aa12.51□□□□□ -0.41
LSS-202ENST00000397728 HIST1H2BAQ96A08 127 aa12.51□□□□□ -0.41
LSS-202ENST00000397728 PGLYRP4Q96LB8 373 aa12.51□□□□□ -0.41
LSS-202ENST00000397728 ZNF462Q96JM2 2506 aa12.51□□□□□ -0.41
LSS-202ENST00000397728 TMEM249Q2WGJ8 235 aa12.5□□□□□ -0.41
LSS-202ENST00000397728 AMMECR1LQ6DCA0 310 aa12.5□□□□□ -0.41
LSS-202ENST00000397728 LRTM2Q8N967 370 aa12.5□□□□□ -0.41
LSS-202ENST00000397728 A0A0B4J293 547 aa12.5□□□□□ -0.41
LSS-202ENST00000397728 FAM71F2Q6NXP2 309 aa12.5□□□□□ -0.41
LSS-202ENST00000397728 Q6ZS49 121 aa12.5□□□□□ -0.41
LSS-202ENST00000397728 MMP23AO75900 390 aa12.5□□□□□ -0.41
LSS-202ENST00000397728 CBLN2Q8IUK8 224 aa12.5□□□□□ -0.41
LSS-202ENST00000397728 WNK1Q9H4A3 2382 aa12.5□□□□□ -0.41
LSS-202ENST00000397728 CBY3A6NI87 242 aa12.5□□□□□ -0.41
LSS-202ENST00000397728 RPS20P60866 119 aaKnown RBP12.5□□□□□ -0.41
LSS-202ENST00000397728 ZNF56Q15929 161 aa12.5□□□□□ -0.41
LSS-202ENST00000397728 TCF24Q7RTU0 167 aa12.5□□□□□ -0.41
LSS-202ENST00000397728 KAAG1Q9UBP8 84 aa12.5□□□□□ -0.41
LSS-202ENST00000397728 LOC389332A0A1B0GUA5 103 aa12.49□□□□□ -0.41
LSS-202ENST00000397728 RELBQ01201 579 aa12.49□□□□□ -0.41
LSS-202ENST00000397728 C1orf147Q96MC9 270 aaPredicted RBP12.49□□□□□ -0.41
LSS-202ENST00000397728 GSX1Q9H4S2 264 aaPredicted RBP12.49□□□□□ -0.41
LSS-202ENST00000397728 CENPWQ5EE01 88 aa12.49□□□□□ -0.41
LSS-202ENST00000397728 LY6G6FQ5SQ64 297 aa12.49□□□□□ -0.41
LSS-202ENST00000397728 OR4D5Q8NGN0 318 aa12.49□□□□□ -0.41
LSS-202ENST00000397728 PARLQ9H300 379 aa12.49□□□□□ -0.41
LSS-202ENST00000397728 Q9H3A6 140 aa12.49□□□□□ -0.41
LSS-202ENST00000397728 A0A1B0GWJ7 208 aa12.49□□□□□ -0.41
LSS-202ENST00000397728 IGHV2-70P01814 119 aa12.49□□□□□ -0.41
LSS-202ENST00000397728 C17orf58Q2M2W7 97 aa12.49□□□□□ -0.41
LSS-202ENST00000397728 C2orf83Q53S99 150 aa12.49□□□□□ -0.41
LSS-202ENST00000397728 PSMG4Q5JS54 123 aa12.49□□□□□ -0.41
LSS-202ENST00000397728 USMG5Q96IX5 58 aa12.49□□□□□ -0.41
LSS-202ENST00000397728 GPR82Q96P67 336 aa12.49□□□□□ -0.41
LSS-202ENST00000397728 CTSZQ9UBR2 303 aa12.49□□□□□ -0.41
LSS-202ENST00000397728 F11RQ9Y624 299 aaKnown RBP12.49□□□□□ -0.41
LSS-202ENST00000397728 DENND4AQ7Z401 1863 aa12.49□□□□□ -0.41
LSS-202ENST00000397728 M0R143 59 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 139.1 ms