RNA–Protein interactions for RNA: ENST00000395354.1

LMNB1-202, Transcript of lamin B1, humanhuman

TSL 1 (best) BASIC

Gene LMNB1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-202ENST00000395354 CYP2G1PQ6ZSU1 146 aa15.24■□□□□ 0.03
LMNB1-202ENST00000395354 TMEM116Q8NCL8 245 aa15.24■□□□□ 0.03
LMNB1-202ENST00000395354 NPIPB3Q92617 1050 aa15.24■□□□□ 0.03
LMNB1-202ENST00000395354 MISP3Q96FF7 219 aa15.24■□□□□ 0.03
LMNB1-202ENST00000395354 ZNF48Q96MX3 618 aaPredicted RBP15.24■□□□□ 0.03
LMNB1-202ENST00000395354 STAG3L2P0CL84 134 aa15.24■□□□□ 0.03
LMNB1-202ENST00000395354 STAG3L3P0CL85 134 aa15.24■□□□□ 0.03
LMNB1-202ENST00000395354 CX3CL1P78423 397 aa15.24■□□□□ 0.03
LMNB1-202ENST00000395354 Q8N9W7 124 aa15.24■□□□□ 0.03
LMNB1-202ENST00000395354 SSX3Q99909 188 aa15.24■□□□□ 0.03
LMNB1-202ENST00000395354 PRDM13Q9H4Q3 707 aa15.24■□□□□ 0.03
LMNB1-202ENST00000395354 ANK3Q12955 4377 aaKnown RBP15.23■□□□□ 0.03
LMNB1-202ENST00000395354 TCRBV4S1A1TA0A5B7 111 aa15.23■□□□□ 0.03
LMNB1-202ENST00000395354 NPIPB5A8MRT5 1133 aa15.23■□□□□ 0.03
LMNB1-202ENST00000395354 CXorf1O96002 111 aa15.23■□□□□ 0.03
LMNB1-202ENST00000395354 MT-CO2P00403 227 aa15.23■□□□□ 0.03
LMNB1-202ENST00000395354 HLA-DRB1P01911 266 aa15.23■□□□□ 0.03
LMNB1-202ENST00000395354 Q6YL49 198 aa15.23■□□□□ 0.03
LMNB1-202ENST00000395354 SIGLECL1Q8N7X8 197 aa15.23■□□□□ 0.03
LMNB1-202ENST00000395354 ARPC1AQ92747 370 aa15.23■□□□□ 0.03
LMNB1-202ENST00000395354 RNF2Q99496 336 aa15.23■□□□□ 0.03
LMNB1-202ENST00000395354 WNT10AQ9GZT5 417 aa15.23■□□□□ 0.03
LMNB1-202ENST00000395354 HMGB3O15347 200 aaKnown RBP15.22■□□□□ 0.03
LMNB1-202ENST00000395354 RND2P52198 227 aa15.22■□□□□ 0.03
LMNB1-202ENST00000395354 CLRN3Q8NCR9 226 aa15.22■□□□□ 0.03
LMNB1-202ENST00000395354 TRGV9Q99603 122 aa15.22■□□□□ 0.03
LMNB1-202ENST00000395354 SLC25A33Q9BSK2 321 aa15.22■□□□□ 0.03
LMNB1-202ENST00000395354 IGKV1D-37A0A075B6S9 117 aa15.21■□□□□ 0.03
LMNB1-202ENST00000395354 APELAP0DMC3 54 aa15.21■□□□□ 0.03
LMNB1-202ENST00000395354 BTN1A1Q13410 526 aa15.21■□□□□ 0.03
LMNB1-202ENST00000395354 TTC9CQ8N5M4 171 aa15.21■□□□□ 0.03
LMNB1-202ENST00000395354 GATAD1Q8WUU5 269 aa15.21■□□□□ 0.03
LMNB1-202ENST00000395354 RASL11BQ9BPW5 248 aa15.21■□□□□ 0.03
LMNB1-202ENST00000395354 TMPRSS5Q9H3S3 457 aa15.21■□□□□ 0.03
LMNB1-202ENST00000395354 DMRT1Q9Y5R6 373 aa15.21■□□□□ 0.03
LMNB1-202ENST00000395354 I3L2K1 104 aa15.2■□□□□ 0.02
LMNB1-202ENST00000395354 OR5G3P0C626 314 aa15.2■□□□□ 0.02
LMNB1-202ENST00000395354 DEFA4P12838 97 aa15.2■□□□□ 0.02
LMNB1-202ENST00000395354 IER3P46695 156 aa15.2■□□□□ 0.02
LMNB1-202ENST00000395354 MEF2BQ02080 365 aaPredicted RBP15.2■□□□□ 0.02
LMNB1-202ENST00000395354 PIFOQ8TCI5 191 aa15.2■□□□□ 0.02
LMNB1-202ENST00000395354 FUT9Q9Y231 359 aa15.2■□□□□ 0.02
LMNB1-202ENST00000395354 H3BUX3 64 aa15.19■□□□□ 0.02
LMNB1-202ENST00000395354 EIF3GO75821 320 aaKnown RBP eCLIP15.19■□□□□ 0.02
LMNB1-202ENST00000395354 CYB561D1Q8N8Q1 229 aa15.19■□□□□ 0.02
LMNB1-202ENST00000395354 TXNDC17Q9BRA2 123 aa15.19■□□□□ 0.02
LMNB1-202ENST00000395354 MRPL32Q9BYC8 188 aaKnown RBP15.19■□□□□ 0.02
LMNB1-202ENST00000395354 SEPSECSQ9HD40 501 aaKnown RBP15.19■□□□□ 0.02
LMNB1-202ENST00000395354 MRPL36Q9P0J6 103 aaKnown RBP15.19■□□□□ 0.02
LMNB1-202ENST00000395354 IGHV7-81A0A0B4J1V7 117 aa15.19■□□□□ 0.02
LMNB1-202ENST00000395354 NPBWR1P48145 328 aa15.19■□□□□ 0.02
LMNB1-202ENST00000395354 OR1L4Q8NGR5 311 aa15.19■□□□□ 0.02
LMNB1-202ENST00000395354 OR4X1Q8NH49 305 aa15.19■□□□□ 0.02
LMNB1-202ENST00000395354 PFDN5Q99471 154 aa15.19■□□□□ 0.02
LMNB1-202ENST00000395354 TNFRSF19Q9NS68 423 aa15.19■□□□□ 0.02
LMNB1-202ENST00000395354 NIPBLQ6KC79 2804 aaeCLIP15.18■□□□□ 0.02
LMNB1-202ENST00000395354 PSMB11A5LHX3 300 aa15.18■□□□□ 0.02
LMNB1-202ENST00000395354 TMEM250H0YL14 139 aa15.18■□□□□ 0.02
LMNB1-202ENST00000395354 HOXA3O43365 443 aaPredicted RBP15.18■□□□□ 0.02
LMNB1-202ENST00000395354 IGHV4-59P01825 116 aa15.18■□□□□ 0.02
LMNB1-202ENST00000395354 ARL14EPLP0DKL9 152 aa15.18■□□□□ 0.02
LMNB1-202ENST00000395354 TAS2R45P59539 299 aa15.18■□□□□ 0.02
LMNB1-202ENST00000395354 ASPHD1Q5U4P2 390 aa15.18■□□□□ 0.02
LMNB1-202ENST00000395354 FAM78BQ5VT40 261 aa15.18■□□□□ 0.02
LMNB1-202ENST00000395354 C19orf35Q6ZS72 473 aa15.18■□□□□ 0.02
LMNB1-202ENST00000395354 IQCF2Q8IXL9 164 aa15.18■□□□□ 0.02
LMNB1-202ENST00000395354 SUN5Q8TC36 379 aa15.18■□□□□ 0.02
LMNB1-202ENST00000395354 ZNF418Q8TF45 676 aaPredicted RBP15.18■□□□□ 0.02
LMNB1-202ENST00000395354 DNAJC4Q9NNZ3 241 aa15.18■□□□□ 0.02
LMNB1-202ENST00000395354 TECRQ9NZ01 308 aaKnown RBP15.18■□□□□ 0.02
LMNB1-202ENST00000395354 DNASE2O00115 360 aaPredicted RBP15.17■□□□□ 0.02
LMNB1-202ENST00000395354 GATA2P23769 480 aaPredicted RBP15.17■□□□□ 0.02
LMNB1-202ENST00000395354 CD81P60033 236 aa15.17■□□□□ 0.02
LMNB1-202ENST00000395354 NDPQ00604 133 aa15.17■□□□□ 0.02
LMNB1-202ENST00000395354 OR5R1Q8NH85 324 aa15.17■□□□□ 0.02
LMNB1-202ENST00000395354 RBM14Q96PK6 669 aaKnown RBP15.17■□□□□ 0.02
LMNB1-202ENST00000395354 FAM103A1Q9BTL3 118 aaKnown RBP15.17■□□□□ 0.02
LMNB1-202ENST00000395354 SETD2Q9BYW2 2564 aaPredicted RBP15.16■□□□□ 0.02
LMNB1-202ENST00000395354 PAGE4O60829 102 aa15.16■□□□□ 0.02
LMNB1-202ENST00000395354 IGHV3-48P01763 117 aa15.16■□□□□ 0.02
LMNB1-202ENST00000395354 EGR2P11161 476 aaPredicted RBP15.16■□□□□ 0.02
LMNB1-202ENST00000395354 GCHFRP30047 84 aa15.16■□□□□ 0.02
LMNB1-202ENST00000395354 LY6EQ16553 131 aa15.16■□□□□ 0.02
LMNB1-202ENST00000395354 SPATA31B1PQ5VZV4 182 aa15.16■□□□□ 0.02
LMNB1-202ENST00000395354 FAM90A2PQ658T7 463 aa15.16■□□□□ 0.02
LMNB1-202ENST00000395354 PQLC2Q6ZP29 291 aa15.16■□□□□ 0.02
LMNB1-202ENST00000395354 TMEM68Q96MH6 324 aa15.16■□□□□ 0.02
LMNB1-202ENST00000395354 ARL2-SNX15V9GYD0 113 aa15.16■□□□□ 0.02
LMNB1-202ENST00000395354 JMJD1CQ15652 2540 aa15.16■□□□□ 0.02
LMNB1-202ENST00000395354 IGLV11-55A0A075B6I3 123 aa15.15■□□□□ 0.02
LMNB1-202ENST00000395354 ELOA3CA0A087WX78 387 aaPredicted RBP15.15■□□□□ 0.02
LMNB1-202ENST00000395354 K7EIM0 57 aa15.15■□□□□ 0.02
LMNB1-202ENST00000395354 PLXNB1O43157 2135 aa15.15■□□□□ 0.02
LMNB1-202ENST00000395354 CLN5O75503 358 aa15.15■□□□□ 0.02
LMNB1-202ENST00000395354 ZNF90Q03938 601 aa15.15■□□□□ 0.02
LMNB1-202ENST00000395354 RHEBQ15382 184 aa15.15■□□□□ 0.02
LMNB1-202ENST00000395354 KLK9Q2XQG4 91 aa15.15■□□□□ 0.02
LMNB1-202ENST00000395354 MIR17HGQ75NE6 70 aa15.15■□□□□ 0.02
LMNB1-202ENST00000395354 SGMS2Q8NHU3 365 aa15.15■□□□□ 0.02
LMNB1-202ENST00000395354 NIPSNAP3BQ9BS92 247 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms