RNA–Protein interactions for RNA: ENST00000394945.5

SPOCK1-202, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPOCK1, Length 4,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK1-202ENST00000394945 RGPD3A6NKT7 1758 aaPredicted RBP12.95□□□□□ -0.34
SPOCK1-202ENST00000394945 PHF3Q92576 2039 aaKnown RBP12.94□□□□□ -0.34
SPOCK1-202ENST00000394945 TRAV5A0A0B4J249 113 aa12.94□□□□□ -0.34
SPOCK1-202ENST00000394945 A0A0G2JRQ6 117 aa12.94□□□□□ -0.34
SPOCK1-202ENST00000394945 PSG7Q13046 419 aa12.94□□□□□ -0.34
SPOCK1-202ENST00000394945 PSG3Q16557 428 aa12.94□□□□□ -0.34
SPOCK1-202ENST00000394945 STPG4Q8N801 248 aa12.94□□□□□ -0.34
SPOCK1-202ENST00000394945 KLHDC3Q9BQ90 382 aa12.94□□□□□ -0.34
SPOCK1-202ENST00000394945 IGHV3OR16-13A0A075B7E8 117 aa12.94□□□□□ -0.34
SPOCK1-202ENST00000394945 IGHV3-74A0A0B4J1X5 117 aa12.94□□□□□ -0.34
SPOCK1-202ENST00000394945 DUTP33316 252 aaKnown RBP12.94□□□□□ -0.34
SPOCK1-202ENST00000394945 FAM231BA6NCW3 169 aa12.94□□□□□ -0.34
SPOCK1-202ENST00000394945 SS18L1O75177 396 aaPredicted RBP12.94□□□□□ -0.34
SPOCK1-202ENST00000394945 PPBPP02775 128 aa12.94□□□□□ -0.34
SPOCK1-202ENST00000394945 PDCD11Q14690 1871 aaKnown RBP12.94□□□□□ -0.34
SPOCK1-202ENST00000394945 CSRP2Q16527 193 aa12.94□□□□□ -0.34
SPOCK1-202ENST00000394945 FLVCR1-AS1Q8TAF5 88 aa12.94□□□□□ -0.34
SPOCK1-202ENST00000394945 COPS9Q8WXC6 57 aa12.94□□□□□ -0.34
SPOCK1-202ENST00000394945 MRAP2Q96G30 205 aa12.94□□□□□ -0.34
SPOCK1-202ENST00000394945 ADAMTSL5Q6ZMM2 481 aa12.94□□□□□ -0.34
SPOCK1-202ENST00000394945 Q6ZRM9 215 aa12.94□□□□□ -0.34
SPOCK1-202ENST00000394945 NOTCH3Q9UM47 2321 aa12.93□□□□□ -0.34
SPOCK1-202ENST00000394945 LOC105371242A0A075B767 164 aa12.93□□□□□ -0.34
SPOCK1-202ENST00000394945 PPIAL4CA0A0B4J2A2 164 aa12.93□□□□□ -0.34
SPOCK1-202ENST00000394945 C5orf63A6NC05 138 aa12.93□□□□□ -0.34
SPOCK1-202ENST00000394945 PPIAL4GP0DN37 164 aa12.93□□□□□ -0.34
SPOCK1-202ENST00000394945 RSPO3Q9BXY4 272 aaPredicted RBP12.93□□□□□ -0.34
SPOCK1-202ENST00000394945 PLCE1Q9P212 2302 aa12.93□□□□□ -0.34
SPOCK1-202ENST00000394945 CRYGSP22914 178 aa12.93□□□□□ -0.34
SPOCK1-202ENST00000394945 WDR90Q96KV7 1748 aa12.93□□□□□ -0.34
SPOCK1-202ENST00000394945 KLK10O43240 276 aa12.93□□□□□ -0.34
SPOCK1-202ENST00000394945 FOXH1O75593 365 aa12.93□□□□□ -0.34
SPOCK1-202ENST00000394945 SPINK8P0C7L1 97 aa12.93□□□□□ -0.34
SPOCK1-202ENST00000394945 SAA1P0DJI8 122 aaPredicted RBP12.93□□□□□ -0.34
SPOCK1-202ENST00000394945 ZNF138P52744 262 aa12.93□□□□□ -0.34
SPOCK1-202ENST00000394945 RNFT1Q5M7Z0 435 aa12.93□□□□□ -0.34
SPOCK1-202ENST00000394945 SLC25A48Q6ZT89 311 aaKnown RBP12.93□□□□□ -0.34
SPOCK1-202ENST00000394945 GTSCR1Q86UQ5 136 aa12.93□□□□□ -0.34
SPOCK1-202ENST00000394945 DNASE2BQ8WZ79 361 aa12.93□□□□□ -0.34
SPOCK1-202ENST00000394945 MGST2Q99735 147 aa12.93□□□□□ -0.34
SPOCK1-202ENST00000394945 SLC25A2Q9BXI2 301 aa12.93□□□□□ -0.34
SPOCK1-202ENST00000394945 PPP1R17O96001 155 aa12.92□□□□□ -0.34
SPOCK1-202ENST00000394945 PMS2CLQ68D20 193 aa12.92□□□□□ -0.34
SPOCK1-202ENST00000394945 KIR3DL3Q8N743 410 aa12.92□□□□□ -0.34
SPOCK1-202ENST00000394945 JMJD8Q96S16 334 aa12.92□□□□□ -0.34
SPOCK1-202ENST00000394945 PSG8Q9UQ74 426 aa12.92□□□□□ -0.34
SPOCK1-202ENST00000394945 RNASE1P07998 156 aaKnown RBP12.92□□□□□ -0.34
SPOCK1-202ENST00000394945 FHL1Q13642 323 aa12.92□□□□□ -0.34
SPOCK1-202ENST00000394945 ZNF56Q15929 161 aa12.92□□□□□ -0.34
SPOCK1-202ENST00000394945 SHISA5Q8N114 240 aa12.92□□□□□ -0.34
SPOCK1-202ENST00000394945 ZNF581Q9P0T4 197 aa12.92□□□□□ -0.34
SPOCK1-202ENST00000394945 FOXA2Q9Y261 457 aaPredicted RBP12.92□□□□□ -0.34
SPOCK1-202ENST00000394945 LSM4Q9Y4Z0 139 aaKnown RBP12.92□□□□□ -0.34
SPOCK1-202ENST00000394945 S4R3C0 116 aa12.92□□□□□ -0.34
SPOCK1-202ENST00000394945 ZNF815PA8K554 130 aa12.92□□□□□ -0.34
SPOCK1-202ENST00000394945 YPEL1O60688 119 aa12.92□□□□□ -0.34
SPOCK1-202ENST00000394945 YPEL2Q96QA6 119 aa12.92□□□□□ -0.34
SPOCK1-202ENST00000394945 TCRBV4S1A1TA0A5B7 111 aa12.92□□□□□ -0.34
SPOCK1-202ENST00000394945 PRR33A8MZF0 331 aa12.92□□□□□ -0.34
SPOCK1-202ENST00000394945 NPIPB11E5RHQ5 1161 aa12.92□□□□□ -0.34
SPOCK1-202ENST00000394945 BRCA1P38398 1863 aaKnown RBP12.92□□□□□ -0.34
SPOCK1-202ENST00000394945 CADP27708 2225 aa12.91□□□□□ -0.34
SPOCK1-202ENST00000394945 MORN2Q502X0 79 aa12.91□□□□□ -0.34
SPOCK1-202ENST00000394945 FAM201AQ5SY85 155 aa12.91□□□□□ -0.34
SPOCK1-202ENST00000394945 IGHV4-39P01824 125 aa12.91□□□□□ -0.34
SPOCK1-202ENST00000394945 MRPL20Q9BYC9 149 aaKnown RBP12.91□□□□□ -0.34
SPOCK1-202ENST00000394945 FABP5P3A8MUU1 101 aa12.91□□□□□ -0.34
SPOCK1-202ENST00000394945 PRTN3P24158 256 aa12.91□□□□□ -0.34
SPOCK1-202ENST00000394945 PRDM6Q9NQX0 595 aa12.91□□□□□ -0.34
SPOCK1-202ENST00000394945 BDP1A6H8Y1 2624 aa12.91□□□□□ -0.34
SPOCK1-202ENST00000394945 SAA2-SAA4A0A096LPE2 208 aa12.91□□□□□ -0.34
SPOCK1-202ENST00000394945 SAA2P0DJI9 122 aaPredicted RBP12.91□□□□□ -0.34
SPOCK1-202ENST00000394945 FBXL15Q9H469 300 aa12.91□□□□□ -0.34
SPOCK1-202ENST00000394945 FAM90A9PA6NNJ1 464 aa12.9□□□□□ -0.34
SPOCK1-202ENST00000394945 NPPCP23582 126 aa12.9□□□□□ -0.34
SPOCK1-202ENST00000394945 PRCDQ00LT1 54 aa12.9□□□□□ -0.34
SPOCK1-202ENST00000394945 SMPXQ9UHP9 88 aa12.9□□□□□ -0.34
SPOCK1-202ENST00000394945 TRAV8-4A0A0B4J246 113 aa12.9□□□□□ -0.34
SPOCK1-202ENST00000394945 EBLN2Q6P2I7 272 aa12.9□□□□□ -0.34
SPOCK1-202ENST00000394945 UNQ6494/PRO21346Q6UXR6 183 aa12.9□□□□□ -0.34
SPOCK1-202ENST00000394945 RPRMLQ8N4K4 120 aa12.9□□□□□ -0.34
SPOCK1-202ENST00000394945 C18orf32Q8TCD1 76 aa12.9□□□□□ -0.34
SPOCK1-202ENST00000394945 A0A0G2JMZ2 1700 aa12.9□□□□□ -0.34
SPOCK1-202ENST00000394945 LRRC37A2A6NM11 1700 aa12.9□□□□□ -0.34
SPOCK1-202ENST00000394945 K7EP13 123 aa12.9□□□□□ -0.34
SPOCK1-202ENST00000394945 FOXF2Q12947 444 aa12.9□□□□□ -0.34
SPOCK1-202ENST00000394945 EFNA2O43921 213 aa12.9□□□□□ -0.35
SPOCK1-202ENST00000394945 DEFB124Q8NES8 71 aa12.9□□□□□ -0.35
SPOCK1-202ENST00000394945 NTF4P34130 210 aa12.89□□□□□ -0.35
SPOCK1-202ENST00000394945 YPEL3P61236 119 aaPredicted RBP12.89□□□□□ -0.35
SPOCK1-202ENST00000394945 FAM216BQ8N7L0 139 aa12.89□□□□□ -0.35
SPOCK1-202ENST00000394945 D6R8Y8 96 aa12.89□□□□□ -0.35
SPOCK1-202ENST00000394945 EVI2AP22794 236 aa12.89□□□□□ -0.35
SPOCK1-202ENST00000394945 SRSF1Q07955 248 aaKnown RBP eCLIP12.89□□□□□ -0.35
SPOCK1-202ENST00000394945 PATJQ8NI35 1801 aa12.89□□□□□ -0.35
SPOCK1-202ENST00000394945 IGLL1P15814 213 aa12.89□□□□□ -0.35
SPOCK1-202ENST00000394945 FXYD7P58549 80 aa12.89□□□□□ -0.35
SPOCK1-202ENST00000394945 FAM159AQ6UWV7 190 aa12.89□□□□□ -0.35
SPOCK1-202ENST00000394945 FGFBP3Q8TAT2 258 aa12.89□□□□□ -0.35
SPOCK1-202ENST00000394945 IGHV2OR16-5A0A0B4J2B6 119 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 118.6 ms