RNA–Protein interactions for RNA: ENST00000388948.7

LRRK1-201, Transcript of leucine rich repeat kinase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRRK1, Length 7,671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-201ENST00000388948 VCX2Q9H322 139 aa12.32□□□□□ -0.44
LRRK1-201ENST00000388948 ADARB2-AS1A8MUL3 147 aa12.32□□□□□ -0.44
LRRK1-201ENST00000388948 TRGC2P03986 189 aa12.32□□□□□ -0.44
LRRK1-201ENST00000388948 SPATA45Q537H7 98 aa12.32□□□□□ -0.44
LRRK1-201ENST00000388948 NYNRINQ9P2P1 1898 aaKnown RBP12.32□□□□□ -0.44
LRRK1-201ENST00000388948 LTBP1Q14766 1721 aa12.32□□□□□ -0.44
LRRK1-201ENST00000388948 ST20Q9HBF5 79 aa12.32□□□□□ -0.44
LRRK1-201ENST00000388948 A6NNC1 897 aa12.32□□□□□ -0.44
LRRK1-201ENST00000388948 TMEM50AO95807 157 aa12.32□□□□□ -0.44
LRRK1-201ENST00000388948 IFI27P40305 119 aaPredicted RBP12.32□□□□□ -0.44
LRRK1-201ENST00000388948 NEUROG1Q92886 237 aa12.32□□□□□ -0.44
LRRK1-201ENST00000388948 ZNF414Q96IQ9 312 aa12.32□□□□□ -0.44
LRRK1-201ENST00000388948 A0A1B0GTI1 187 aa12.31□□□□□ -0.44
LRRK1-201ENST00000388948 COL8A2P25067 703 aa12.31□□□□□ -0.44
LRRK1-201ENST00000388948 LINC00114Q6XXX2 140 aa12.31□□□□□ -0.44
LRRK1-201ENST00000388948 GATA4P43694 442 aa12.31□□□□□ -0.44
LRRK1-201ENST00000388948 FXYD7P58549 80 aa12.31□□□□□ -0.44
LRRK1-201ENST00000388948 OTORQ9NRC9 128 aa12.31□□□□□ -0.44
LRRK1-201ENST00000388948 M0R1W7 72 aa12.31□□□□□ -0.44
LRRK1-201ENST00000388948 TRBV6-7A0A0A0MS04 114 aa12.31□□□□□ -0.44
LRRK1-201ENST00000388948 IGHV1-3A0A0C4DH29 117 aa12.31□□□□□ -0.44
LRRK1-201ENST00000388948 FHITP49789 147 aa12.31□□□□□ -0.44
LRRK1-201ENST00000388948 UBE2E2Q96LR5 201 aa12.31□□□□□ -0.44
LRRK1-201ENST00000388948 TRGV1A0A0A0MS02 117 aa12.31□□□□□ -0.44
LRRK1-201ENST00000388948 FABP2P12104 132 aa12.31□□□□□ -0.44
LRRK1-201ENST00000388948 PMCHL1Q16048 86 aa12.31□□□□□ -0.44
LRRK1-201ENST00000388948 TMEM144Q7Z5S9 345 aa12.31□□□□□ -0.44
LRRK1-201ENST00000388948 TMEM183AQ8IXX5 376 aa12.31□□□□□ -0.44
LRRK1-201ENST00000388948 C11orf68Q9H3H3 251 aaKnown RBP12.31□□□□□ -0.44
LRRK1-201ENST00000388948 SRRM5B3KS81 715 aa12.3□□□□□ -0.44
LRRK1-201ENST00000388948 CD5P06127 495 aa12.3□□□□□ -0.44
LRRK1-201ENST00000388948 KIR3DL3Q8N743 410 aa12.3□□□□□ -0.44
LRRK1-201ENST00000388948 C1QTNF4Q9BXJ3 329 aa12.3□□□□□ -0.44
LRRK1-201ENST00000388948 E9PQ18 207 aa12.3□□□□□ -0.44
LRRK1-201ENST00000388948 TICRRQ7Z2Z1 1910 aa12.3□□□□□ -0.44
LRRK1-201ENST00000388948 SCO2A0A1W2PP80 73 aa12.3□□□□□ -0.44
LRRK1-201ENST00000388948 NAT1P18440 290 aa12.3□□□□□ -0.44
LRRK1-201ENST00000388948 PAQR4Q8N4S7 273 aaPredicted RBP12.3□□□□□ -0.44
LRRK1-201ENST00000388948 LYZL4Q96KX0 146 aa12.3□□□□□ -0.44
LRRK1-201ENST00000388948 RCHY1Q96PM5 261 aa12.3□□□□□ -0.44
LRRK1-201ENST00000388948 PCNX2A6NKB5 2137 aa12.3□□□□□ -0.44
LRRK1-201ENST00000388948 OVOL1O14753 267 aa12.3□□□□□ -0.44
LRRK1-201ENST00000388948 SIPA1L1O43166 1804 aa12.3□□□□□ -0.44
LRRK1-201ENST00000388948 OOSP1A8MZH6 123 aa12.3□□□□□ -0.44
LRRK1-201ENST00000388948 SAA4P35542 130 aa12.3□□□□□ -0.44
LRRK1-201ENST00000388948 GTF3AQ92664 365 aaKnown RBP12.3□□□□□ -0.44
LRRK1-201ENST00000388948 RCC1LQ96I51 464 aaKnown RBP12.3□□□□□ -0.44
LRRK1-201ENST00000388948 RPP21Q9H633 154 aaKnown RBP12.3□□□□□ -0.44
LRRK1-201ENST00000388948 HEPN1Q6WQI6 88 aa12.29□□□□□ -0.44
LRRK1-201ENST00000388948 GATA3P23771 443 aa12.29□□□□□ -0.44
LRRK1-201ENST00000388948 OR10W1Q8NGF6 305 aa12.29□□□□□ -0.44
LRRK1-201ENST00000388948 IGHV3-53P01767 116 aa12.29□□□□□ -0.44
LRRK1-201ENST00000388948 DANCRP0C864 163 aa12.29□□□□□ -0.44
LRRK1-201ENST00000388948 COTL1Q14019 142 aa12.29□□□□□ -0.44
LRRK1-201ENST00000388948 CD8AP01732 235 aa12.29□□□□□ -0.44
LRRK1-201ENST00000388948 PPIFP30405 207 aaKnown RBP12.29□□□□□ -0.44
LRRK1-201ENST00000388948 GNG5P63218 68 aa12.29□□□□□ -0.44
LRRK1-201ENST00000388948 TRBV9A0A0B4J1U6 114 aa12.29□□□□□ -0.44
LRRK1-201ENST00000388948 NUDT11Q96G61 164 aa12.29□□□□□ -0.44
LRRK1-201ENST00000388948 MBNL3Q9NUK0 354 aaKnown RBP12.29□□□□□ -0.44
LRRK1-201ENST00000388948 BDP1A6H8Y1 2624 aa12.29□□□□□ -0.44
LRRK1-201ENST00000388948 LINC00271P0C7V0 271 aa12.29□□□□□ -0.44
LRRK1-201ENST00000388948 CBY1Q9Y3M2 126 aa12.29□□□□□ -0.44
LRRK1-201ENST00000388948 PSPNO60542 156 aa12.28□□□□□ -0.44
LRRK1-201ENST00000388948 RPL15P61313 204 aaKnown RBP12.28□□□□□ -0.44
LRRK1-201ENST00000388948 JKAMPQ9P055 326 aa12.28□□□□□ -0.44
LRRK1-201ENST00000388948 TBL2Q9Y4P3 447 aaKnown RBP12.28□□□□□ -0.44
LRRK1-201ENST00000388948 APOHP02749 345 aaPredicted RBP12.28□□□□□ -0.44
LRRK1-201ENST00000388948 LBHQ53QV2 105 aaPredicted RBP12.28□□□□□ -0.44
LRRK1-201ENST00000388948 GREB1LQ9C091 1923 aaPredicted RBP12.28□□□□□ -0.44
LRRK1-201ENST00000388948 IGHV3-73A0A0B4J1V6 119 aa12.28□□□□□ -0.44
LRRK1-201ENST00000388948 EFNB1P98172 346 aa12.28□□□□□ -0.44
LRRK1-201ENST00000388948 PTPRQQ9UMZ3 2332 aa12.28□□□□□ -0.44
LRRK1-201ENST00000388948 H2BFSP57053 126 aa12.28□□□□□ -0.44
LRRK1-201ENST00000388948 NDPQ00604 133 aa12.28□□□□□ -0.44
LRRK1-201ENST00000388948 C17orf82Q86X59 251 aaPredicted RBP12.28□□□□□ -0.44
LRRK1-201ENST00000388948 TGIF2-C20orf24A0A0A6YYL0 155 aa12.28□□□□□ -0.44
LRRK1-201ENST00000388948 E7EQL1 145 aa12.28□□□□□ -0.44
LRRK1-201ENST00000388948 DUTP33316 252 aaKnown RBP12.28□□□□□ -0.44
LRRK1-201ENST00000388948 SEPSECSQ9HD40 501 aaKnown RBP12.28□□□□□ -0.44
LRRK1-201ENST00000388948 MGAMO43451 1857 aa12.28□□□□□ -0.44
LRRK1-201ENST00000388948 PRB4P10163 310 aaPredicted RBP12.28□□□□□ -0.44
LRRK1-201ENST00000388948 CKS1BP61024 79 aa12.28□□□□□ -0.44
LRRK1-201ENST00000388948 CR1LQ2VPA4 569 aa12.28□□□□□ -0.44
LRRK1-201ENST00000388948 NDUFA3O95167 84 aa12.27□□□□□ -0.44
LRRK1-201ENST00000388948 Q6AWC8 147 aa12.27□□□□□ -0.44
LRRK1-201ENST00000388948 FNDC1Q4ZHG4 1894 aaPredicted RBP12.27□□□□□ -0.44
LRRK1-201ENST00000388948 TRBV7-1A0A0A6YYK4 115 aa12.27□□□□□ -0.44
LRRK1-201ENST00000388948 CBLN1P23435 193 aa12.27□□□□□ -0.44
LRRK1-201ENST00000388948 ZNF474Q6S9Z5 364 aaPredicted RBP12.27□□□□□ -0.44
LRRK1-201ENST00000388948 GFI1BQ5VTD9 330 aa12.27□□□□□ -0.44
LRRK1-201ENST00000388948 ORMDL3Q8N138 153 aa12.27□□□□□ -0.44
LRRK1-201ENST00000388948 DPRXA6NFQ7 191 aa12.27□□□□□ -0.45
LRRK1-201ENST00000388948 SLC17A3O00476 420 aa12.27□□□□□ -0.45
LRRK1-201ENST00000388948 RUSC1-AS1Q66K80 236 aa12.27□□□□□ -0.45
LRRK1-201ENST00000388948 ATOH7Q8N100 152 aa12.27□□□□□ -0.45
LRRK1-201ENST00000388948 IGKV1D-13A0A0B4J2D9 117 aa12.27□□□□□ -0.45
LRRK1-201ENST00000388948 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.27□□□□□ -0.45
LRRK1-201ENST00000388948 IGKV1-13P0DP09 117 aa12.27□□□□□ -0.45
LRRK1-201ENST00000388948 ZNF660Q6AZW8 331 aaPredicted RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 168.2 ms