RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 ST8SIA2Q92186 375 aa12.52□□□□□ -0.41
HMGN4-201ENST00000377575 NARS2Q96I59 477 aaKnown RBP12.52□□□□□ -0.41
HMGN4-201ENST00000377575 RBKSQ9H477 322 aa12.52□□□□□ -0.41
HMGN4-201ENST00000377575 A0A1W2PS18 150 aa12.51□□□□□ -0.41
HMGN4-201ENST00000377575 SFT2D2O95562 160 aa12.51□□□□□ -0.41
HMGN4-201ENST00000377575 IGKV1-17P01599 117 aa12.51□□□□□ -0.41
HMGN4-201ENST00000377575 SLC25A6P12236 298 aa12.51□□□□□ -0.41
HMGN4-201ENST00000377575 NPPCP23582 126 aa12.51□□□□□ -0.41
HMGN4-201ENST00000377575 OR10J1P30954 320 aa12.51□□□□□ -0.41
HMGN4-201ENST00000377575 ATP5IP56385 69 aaPredicted RBP12.51□□□□□ -0.41
HMGN4-201ENST00000377575 PPP1R1AQ13522 171 aa12.51□□□□□ -0.41
HMGN4-201ENST00000377575 TIGITQ495A1 244 aa12.51□□□□□ -0.41
HMGN4-201ENST00000377575 FAM90A2PQ658T7 463 aa12.51□□□□□ -0.41
HMGN4-201ENST00000377575 TMED3Q9Y3Q3 217 aa12.51□□□□□ -0.41
HMGN4-201ENST00000377575 IGKV3-7A0A075B6H7 116 aa12.5□□□□□ -0.41
HMGN4-201ENST00000377575 CENPXA8MT69 81 aa12.5□□□□□ -0.41
HMGN4-201ENST00000377575 IGLC1P0CG04 106 aa12.5□□□□□ -0.41
HMGN4-201ENST00000377575 TFPI2P48307 235 aa12.5□□□□□ -0.41
HMGN4-201ENST00000377575 BAK1Q16611 211 aa12.5□□□□□ -0.41
HMGN4-201ENST00000377575 TMEM170AQ8WVE7 144 aa12.5□□□□□ -0.41
HMGN4-201ENST00000377575 FAM90A26D6RGX4 464 aa12.49□□□□□ -0.41
HMGN4-201ENST00000377575 NDUFB6O95139 128 aa12.49□□□□□ -0.41
HMGN4-201ENST00000377575 APOHP02749 345 aaPredicted RBP12.49□□□□□ -0.41
HMGN4-201ENST00000377575 CRYBB3P26998 211 aa12.49□□□□□ -0.41
HMGN4-201ENST00000377575 YPEL3P61236 119 aaPredicted RBP12.49□□□□□ -0.41
HMGN4-201ENST00000377575 RPL11P62913 178 aaKnown RBP12.49□□□□□ -0.41
HMGN4-201ENST00000377575 GBGT1Q8N5D6 347 aa12.49□□□□□ -0.41
HMGN4-201ENST00000377575 Q8WTZ3 238 aa12.49□□□□□ -0.41
HMGN4-201ENST00000377575 ACY3Q96HD9 319 aa12.49□□□□□ -0.41
HMGN4-201ENST00000377575 GRAMD2BQ96HH9 432 aa12.49□□□□□ -0.41
HMGN4-201ENST00000377575 C7orf50Q9BRJ6 194 aaKnown RBP12.49□□□□□ -0.41
HMGN4-201ENST00000377575 TRAV2A0A0B4J234 112 aa12.48□□□□□ -0.41
HMGN4-201ENST00000377575 IGHV3-66A0A0C4DH42 116 aa12.48□□□□□ -0.41
HMGN4-201ENST00000377575 KIR2DL5BA0A0G2JN68 375 aa12.48□□□□□ -0.41
HMGN4-201ENST00000377575 KIR2DL5BA0A0G2JPC4 375 aa12.48□□□□□ -0.41
HMGN4-201ENST00000377575 DNASE2O00115 360 aaPredicted RBP12.48□□□□□ -0.41
HMGN4-201ENST00000377575 UBE2CO00762 179 aa12.48□□□□□ -0.41
HMGN4-201ENST00000377575 PITX3O75364 302 aa12.48□□□□□ -0.41
HMGN4-201ENST00000377575 MED6O75586 246 aa12.48□□□□□ -0.41
HMGN4-201ENST00000377575 DFFBO76075 338 aa12.48□□□□□ -0.41
HMGN4-201ENST00000377575 IFNA4P05014 189 aa12.48□□□□□ -0.41
HMGN4-201ENST00000377575 KIR2DL5AQ8N109 375 aa12.48□□□□□ -0.41
HMGN4-201ENST00000377575 KIR2DL5BQ8NHK3 375 aa12.48□□□□□ -0.41
HMGN4-201ENST00000377575 MS4A6AQ9H2W1 248 aa12.48□□□□□ -0.41
HMGN4-201ENST00000377575 PLA2G2EQ9NZK7 142 aa12.48□□□□□ -0.41
HMGN4-201ENST00000377575 P2RY1P47900 373 aa12.47□□□□□ -0.41
HMGN4-201ENST00000377575 EIF2B2P49770 351 aaKnown RBP12.47□□□□□ -0.41
HMGN4-201ENST00000377575 IL17DQ8TAD2 202 aa12.47□□□□□ -0.41
HMGN4-201ENST00000377575 NPIPB3Q92617 1050 aa12.47□□□□□ -0.41
HMGN4-201ENST00000377575 SLC35E1Q96K37 410 aa12.47□□□□□ -0.41
HMGN4-201ENST00000377575 CIB3Q96Q77 187 aaPredicted RBP12.47□□□□□ -0.41
HMGN4-201ENST00000377575 SDHCQ99643 169 aaPredicted RBP12.47□□□□□ -0.41
HMGN4-201ENST00000377575 MAP6D1Q9H9H5 199 aa12.47□□□□□ -0.41
HMGN4-201ENST00000377575 TP53TG1Q9Y2A0 90 aa12.47□□□□□ -0.41
HMGN4-201ENST00000377575 CSMD3Q7Z407 3707 aa12.47□□□□□ -0.41
HMGN4-201ENST00000377575 LINC00854A0A1B0GVQ3 168 aa12.46□□□□□ -0.41
HMGN4-201ENST00000377575 TOMM40O96008 361 aa12.46□□□□□ -0.41
HMGN4-201ENST00000377575 HNRNPCP07910 306 aaKnown RBP eCLIP12.46□□□□□ -0.41
HMGN4-201ENST00000377575 HOXB5P09067 269 aa12.46□□□□□ -0.41
HMGN4-201ENST00000377575 IL7P13232 177 aa12.46□□□□□ -0.41
HMGN4-201ENST00000377575 RPL35AP18077 110 aaKnown RBP12.46□□□□□ -0.41
HMGN4-201ENST00000377575 GPX4P36969 197 aaPredicted RBP12.46□□□□□ -0.41
HMGN4-201ENST00000377575 RAB11AP62491 216 aa12.46□□□□□ -0.41
HMGN4-201ENST00000377575 RPP30P78346 268 aaKnown RBP12.46□□□□□ -0.41
HMGN4-201ENST00000377575 ZFAND6Q6FIF0 208 aa12.46□□□□□ -0.41
HMGN4-201ENST00000377575 Q6ZWC4 215 aa12.46□□□□□ -0.41
HMGN4-201ENST00000377575 WFDC3Q8IUB2 231 aa12.46□□□□□ -0.41
HMGN4-201ENST00000377575 APRG1Q8IVJ8 170 aa12.46□□□□□ -0.41
HMGN4-201ENST00000377575 LILRB2Q8N423 598 aa12.46□□□□□ -0.41
HMGN4-201ENST00000377575 STPG3Q8N7X2 389 aa12.46□□□□□ -0.41
HMGN4-201ENST00000377575 COQ8AQ8NI60 647 aa12.46□□□□□ -0.41
HMGN4-201ENST00000377575 OVOL2Q9BRP0 275 aa12.46□□□□□ -0.41
HMGN4-201ENST00000377575 RABAC1Q9UI14 185 aa12.46□□□□□ -0.41
HMGN4-201ENST00000377575 C9orf170A2RU37 121 aa12.45□□□□□ -0.42
HMGN4-201ENST00000377575 IL4P05112 153 aa12.45□□□□□ -0.42
HMGN4-201ENST00000377575 RD3LP0DJH9 198 aa12.45□□□□□ -0.42
HMGN4-201ENST00000377575 IAPPP10997 89 aa12.45□□□□□ -0.42
HMGN4-201ENST00000377575 GGNBP1Q5YKI7 109 aa12.45□□□□□ -0.42
HMGN4-201ENST00000377575 HELTA6NFD8 242 aa12.44□□□□□ -0.42
HMGN4-201ENST00000377575 SYNGR2O43760 224 aa12.44□□□□□ -0.42
HMGN4-201ENST00000377575 BTCP35070 178 aa12.44□□□□□ -0.42
HMGN4-201ENST00000377575 DHRS2Q13268 280 aa12.44□□□□□ -0.42
HMGN4-201ENST00000377575 DEFB135Q30KP9 77 aa12.44□□□□□ -0.42
HMGN4-201ENST00000377575 CNPY1Q3B7I2 92 aa12.44□□□□□ -0.42
HMGN4-201ENST00000377575 STXBP6Q8NFX7 210 aa12.44□□□□□ -0.42
HMGN4-201ENST00000377575 PAIP2BQ9ULR5 123 aaKnown RBP12.44□□□□□ -0.42
HMGN4-201ENST00000377575 FLVCR2Q9UPI3 526 aa12.44□□□□□ -0.42
HMGN4-201ENST00000377575 ZFP92A6NM28 416 aa12.43□□□□□ -0.42
HMGN4-201ENST00000377575 SPRY2O43597 315 aa12.43□□□□□ -0.42
HMGN4-201ENST00000377575 IFNA21P01568 189 aa12.43□□□□□ -0.42
HMGN4-201ENST00000377575 FABP1P07148 127 aa12.43□□□□□ -0.42
HMGN4-201ENST00000377575 OR4E1P0C645 316 aa12.43□□□□□ -0.42
HMGN4-201ENST00000377575 NUP62P37198 522 aaPredicted RBP12.43□□□□□ -0.42
HMGN4-201ENST00000377575 ZNF124Q15973 351 aa12.43□□□□□ -0.42
HMGN4-201ENST00000377575 C4orf46Q504U0 113 aa12.43□□□□□ -0.42
HMGN4-201ENST00000377575 LYG2Q86SG7 212 aa12.43□□□□□ -0.42
HMGN4-201ENST00000377575 U3KQE9 123 aa12.43□□□□□ -0.42
HMGN4-201ENST00000377575 STARD9Q9P2P6 4700 aa12.42□□□□□ -0.42
HMGN4-201ENST00000377575 PSG1P11464 419 aa12.42□□□□□ -0.42
HMGN4-201ENST00000377575 AP2S1P53680 142 aaPredicted RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms