RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 RITA1Q96K30 269 aa11.22□□□□□ -0.61
USF1-202ENST00000368020 TNFRSF19Q9NS68 423 aa11.22□□□□□ -0.61
USF1-202ENST00000368020 PITPNC1Q9UKF7 332 aa11.22□□□□□ -0.61
USF1-202ENST00000368020 HELTA6NFD8 242 aa11.21□□□□□ -0.61
USF1-202ENST00000368020 ODF3BA8MYP8 253 aa11.21□□□□□ -0.61
USF1-202ENST00000368020 TRGC1P0CF51 173 aa11.21□□□□□ -0.61
USF1-202ENST00000368020 NECAP1Q8NC96 275 aa11.21□□□□□ -0.61
USF1-202ENST00000368020 OR10G8Q8NGN5 311 aa11.21□□□□□ -0.61
USF1-202ENST00000368020 OR4X1Q8NH49 305 aa11.21□□□□□ -0.61
USF1-202ENST00000368020 SRSF12Q8WXF0 261 aaKnown RBP11.21□□□□□ -0.61
USF1-202ENST00000368020 GAR1Q9NY12 217 aaKnown RBP11.21□□□□□ -0.61
USF1-202ENST00000368020 NAV3Q8IVL0 2385 aa11.21□□□□□ -0.62
USF1-202ENST00000368020 TRBV20OR9-2A0A075B6H5 130 aa11.21□□□□□ -0.62
USF1-202ENST00000368020 IGKV1D-37A0A075B6S9 117 aa11.21□□□□□ -0.62
USF1-202ENST00000368020 PHOX2AO14813 284 aa11.21□□□□□ -0.62
USF1-202ENST00000368020 NBR2O15453 112 aa11.21□□□□□ -0.62
USF1-202ENST00000368020 MOSP00540 346 aa11.21□□□□□ -0.62
USF1-202ENST00000368020 GATA2P23769 480 aaPredicted RBP11.21□□□□□ -0.62
USF1-202ENST00000368020 GNG4P50150 75 aa11.21□□□□□ -0.62
USF1-202ENST00000368020 MINOS1Q5TGZ0 78 aa11.21□□□□□ -0.62
USF1-202ENST00000368020 TEX38Q6PEX7 206 aa11.21□□□□□ -0.62
USF1-202ENST00000368020 NPBQ8NG41 125 aa11.21□□□□□ -0.62
USF1-202ENST00000368020 OR5T1Q8NG75 326 aa11.21□□□□□ -0.62
USF1-202ENST00000368020 OR5AU1Q8NGC0 362 aa11.21□□□□□ -0.62
USF1-202ENST00000368020 FRZBQ92765 325 aa11.21□□□□□ -0.62
USF1-202ENST00000368020 ZNF503Q96F45 646 aa11.21□□□□□ -0.62
USF1-202ENST00000368020 FAM167A-AS1Q96KT0 104 aa11.21□□□□□ -0.62
USF1-202ENST00000368020 SLC25A2Q9BXI2 301 aa11.21□□□□□ -0.62
USF1-202ENST00000368020 MINOS1-NBL1R4GNA1 71 aa11.21□□□□□ -0.62
USF1-202ENST00000368020 BAHCC1Q9P281 2608 aa11.2□□□□□ -0.62
USF1-202ENST00000368020 TEX22C9J3V5 150 aa11.2□□□□□ -0.62
USF1-202ENST00000368020 TIMM23O14925 209 aa11.2□□□□□ -0.62
USF1-202ENST00000368020 PLP1P60201 277 aa11.2□□□□□ -0.62
USF1-202ENST00000368020 ARF6P62330 175 aa11.2□□□□□ -0.62
USF1-202ENST00000368020 MMDQ15546 238 aa11.2□□□□□ -0.62
USF1-202ENST00000368020 TIGITQ495A1 244 aa11.2□□□□□ -0.62
USF1-202ENST00000368020 OCC1Q8TAD7 63 aa11.2□□□□□ -0.62
USF1-202ENST00000368020 IGFBPL1Q8WX77 278 aa11.2□□□□□ -0.62
USF1-202ENST00000368020 EAF1Q96JC9 268 aaPredicted RBP11.2□□□□□ -0.62
USF1-202ENST00000368020 PAXXQ9BUH6 204 aa11.2□□□□□ -0.62
USF1-202ENST00000368020 FBXL15Q9H469 300 aa11.2□□□□□ -0.62
USF1-202ENST00000368020 UBTD1Q9HAC8 227 aa11.2□□□□□ -0.62
USF1-202ENST00000368020 ZNF355PQ9NSJ1 428 aa11.2□□□□□ -0.62
USF1-202ENST00000368020 LRBAP50851 2863 aa11.2□□□□□ -0.62
USF1-202ENST00000368020 NDUFA3O95167 84 aa11.19□□□□□ -0.62
USF1-202ENST00000368020 REG1AP05451 166 aa11.19□□□□□ -0.62
USF1-202ENST00000368020 OR10J4P0C629 311 aa11.19□□□□□ -0.62
USF1-202ENST00000368020 CNTFRP26992 372 aa11.19□□□□□ -0.62
USF1-202ENST00000368020 EFNA4P52798 201 aa11.19□□□□□ -0.62
USF1-202ENST00000368020 TAS2R60P59551 318 aa11.19□□□□□ -0.62
USF1-202ENST00000368020 HCP5Q6MZN7 132 aa11.19□□□□□ -0.62
USF1-202ENST00000368020 ELOVL1Q9BW60 279 aa11.19□□□□□ -0.62
USF1-202ENST00000368020 OR51M1Q9H341 326 aa11.19□□□□□ -0.62
USF1-202ENST00000368020 CRYBG3Q68DQ2 2970 aa11.19□□□□□ -0.62
USF1-202ENST00000368020 OVOL3O00110 214 aa11.18□□□□□ -0.62
USF1-202ENST00000368020 CNIH1O95406 144 aa11.18□□□□□ -0.62
USF1-202ENST00000368020 ZNF90Q03938 601 aa11.18□□□□□ -0.62
USF1-202ENST00000368020 ACTL10Q5JWF8 245 aa11.18□□□□□ -0.62
USF1-202ENST00000368020 S100A7AQ86SG5 101 aa11.18□□□□□ -0.62
USF1-202ENST00000368020 SGMS2Q8NHU3 365 aa11.18□□□□□ -0.62
USF1-202ENST00000368020 GGTLC3B5MD39 225 aa11.18□□□□□ -0.62
USF1-202ENST00000368020 HYPMO75409 117 aa11.18□□□□□ -0.62
USF1-202ENST00000368020 LY6HO94772 140 aa11.18□□□□□ -0.62
USF1-202ENST00000368020 CRYBB3P26998 211 aa11.18□□□□□ -0.62
USF1-202ENST00000368020 CENPWQ5EE01 88 aa11.18□□□□□ -0.62
USF1-202ENST00000368020 LINC00305Q7Z4B0 112 aa11.18□□□□□ -0.62
USF1-202ENST00000368020 CFHR4Q92496 578 aa11.18□□□□□ -0.62
USF1-202ENST00000368020 IL36BQ9NZH7 164 aa11.18□□□□□ -0.62
USF1-202ENST00000368020 CDC42EP3Q9UKI2 254 aa11.18□□□□□ -0.62
USF1-202ENST00000368020 ABCA12Q86UK0 2595 aa11.17□□□□□ -0.62
USF1-202ENST00000368020 COL8A1P27658 744 aa11.17□□□□□ -0.62
USF1-202ENST00000368020 CNN1P51911 297 aaKnown RBP11.17□□□□□ -0.62
USF1-202ENST00000368020 SUMO1P63165 101 aaKnown RBP11.17□□□□□ -0.62
USF1-202ENST00000368020 COA6Q5JTJ3 125 aaKnown RBP11.17□□□□□ -0.62
USF1-202ENST00000368020 TMEM183AQ8IXX5 376 aa11.17□□□□□ -0.62
USF1-202ENST00000368020 SMIM12Q96EX1 92 aa11.17□□□□□ -0.62
USF1-202ENST00000368020 OSTCQ9NRP0 149 aa11.17□□□□□ -0.62
USF1-202ENST00000368020 TBL2Q9Y4P3 447 aaKnown RBP11.17□□□□□ -0.62
USF1-202ENST00000368020 MFAP2P55001 183 aa11.16□□□□□ -0.62
USF1-202ENST00000368020 DLX1P56177 255 aa11.16□□□□□ -0.62
USF1-202ENST00000368020 LGALS4P56470 323 aa11.16□□□□□ -0.62
USF1-202ENST00000368020 SSBP2P81877 361 aaPredicted RBP11.16□□□□□ -0.62
USF1-202ENST00000368020 RPEL1Q2QD12 228 aa11.16□□□□□ -0.62
USF1-202ENST00000368020 COX19Q49B96 90 aa11.16□□□□□ -0.62
USF1-202ENST00000368020 PATE2Q6UY27 113 aa11.16□□□□□ -0.62
USF1-202ENST00000368020 HIST3H2BBQ8N257 126 aa11.16□□□□□ -0.62
USF1-202ENST00000368020 PLXNB1O43157 2135 aa11.16□□□□□ -0.62
USF1-202ENST00000368020 TRBV9A0A0B4J1U6 114 aa11.15□□□□□ -0.62
USF1-202ENST00000368020 A0A0U1RQK1 487 aa11.15□□□□□ -0.62
USF1-202ENST00000368020 ZNF320A2RRD8 509 aa11.15□□□□□ -0.62
USF1-202ENST00000368020 PGPEP1LA6NFU8 196 aa11.15□□□□□ -0.62
USF1-202ENST00000368020 ISLRO14498 428 aa11.15□□□□□ -0.62
USF1-202ENST00000368020 ERVFC1-1P60608 527 aa11.15□□□□□ -0.62
USF1-202ENST00000368020 C5orf64Q2M2E5 130 aa11.15□□□□□ -0.62
USF1-202ENST00000368020 DNLZQ5SXM8 178 aa11.15□□□□□ -0.62
USF1-202ENST00000368020 VMO1Q7Z5L0 202 aa11.15□□□□□ -0.62
USF1-202ENST00000368020 OR1B1Q8NGR6 318 aa11.15□□□□□ -0.62
USF1-202ENST00000368020 RASL11BQ9BPW5 248 aa11.15□□□□□ -0.62
USF1-202ENST00000368020 RNF24Q9Y225 148 aa11.15□□□□□ -0.62
USF1-202ENST00000368020 HILPDAQ9Y5L2 63 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 147.3 ms