RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 LSM4Q9Y4Z0 139 aaKnown RBP16.02■□□□□ 0.16
SHISA4-201ENST00000362011 CLPSL1A2RUU4 121 aa16.01■□□□□ 0.15
SHISA4-201ENST00000362011 ZFP92A6NM28 416 aa16.01■□□□□ 0.15
SHISA4-201ENST00000362011 GNG7O60262 68 aa16.01■□□□□ 0.15
SHISA4-201ENST00000362011 CLN5O75503 358 aa16.01■□□□□ 0.15
SHISA4-201ENST00000362011 ATP6V0CP27449 155 aa16.01■□□□□ 0.15
SHISA4-201ENST00000362011 FCGR2BP31994 310 aaPredicted RBP16.01■□□□□ 0.15
SHISA4-201ENST00000362011 RAB31Q13636 194 aa16.01■□□□□ 0.15
SHISA4-201ENST00000362011 RNF152Q8N8N0 203 aa16.01■□□□□ 0.15
SHISA4-201ENST00000362011 ZNF709Q8N972 641 aa16.01■□□□□ 0.15
SHISA4-201ENST00000362011 OR5AU1Q8NGC0 362 aa16.01■□□□□ 0.15
SHISA4-201ENST00000362011 OR4X2Q8NGF9 303 aa16.01■□□□□ 0.15
SHISA4-201ENST00000362011 GNPNAT1Q96EK6 184 aaPredicted RBP16.01■□□□□ 0.15
SHISA4-201ENST00000362011 MGST2Q99735 147 aa16.01■□□□□ 0.15
SHISA4-201ENST00000362011 GAR1Q9NY12 217 aaKnown RBP16.01■□□□□ 0.15
SHISA4-201ENST00000362011 RNF114Q9Y508 228 aa16.01■□□□□ 0.15
SHISA4-201ENST00000362011 IGKV1OR2-108A0A075B7D4 117 aa16■□□□□ 0.15
SHISA4-201ENST00000362011 TRAV30A0A087WSZ9 112 aa16■□□□□ 0.15
SHISA4-201ENST00000362011 C17orf112F2Z3M2 114 aa16■□□□□ 0.15
SHISA4-201ENST00000362011 AGPAT2O15120 278 aa16■□□□□ 0.15
SHISA4-201ENST00000362011 SCGB2A1O75556 95 aa16■□□□□ 0.15
SHISA4-201ENST00000362011 OR10J1P30954 320 aa16■□□□□ 0.15
SHISA4-201ENST00000362011 AWAT1Q58HT5 328 aa16■□□□□ 0.15
SHISA4-201ENST00000362011 WIPF2Q8TF74 440 aaPredicted RBP16■□□□□ 0.15
SHISA4-201ENST00000362011 ATP6V0BQ99437 205 aa16■□□□□ 0.15
SHISA4-201ENST00000362011 RSG1Q9BU20 258 aa16■□□□□ 0.15
SHISA4-201ENST00000362011 GGTLC1Q9BX51 225 aa16■□□□□ 0.15
SHISA4-201ENST00000362011 NPCDR1Q9BY65 106 aa16■□□□□ 0.15
SHISA4-201ENST00000362011 TIMM9Q9Y5J7 89 aa16■□□□□ 0.15
SHISA4-201ENST00000362011 PKD1L1Q8TDX9 2849 aa16■□□□□ 0.15
SHISA4-201ENST00000362011 IGKV1D-37A0A075B6S9 117 aa15.99■□□□□ 0.15
SHISA4-201ENST00000362011 F8W735 103 aaPredicted RBP15.99■□□□□ 0.15
SHISA4-201ENST00000362011 RPLP1P05386 114 aaKnown RBP15.99■□□□□ 0.15
SHISA4-201ENST00000362011 CAMLGP49069 296 aa15.99■□□□□ 0.15
SHISA4-201ENST00000362011 ZNF491Q8N8L2 437 aa15.99■□□□□ 0.15
SHISA4-201ENST00000362011 MYOZ3Q8TDC0 251 aa15.99■□□□□ 0.15
SHISA4-201ENST00000362011 CCDC140Q96MF4 163 aa15.99■□□□□ 0.15
SHISA4-201ENST00000362011 TRGV9Q99603 122 aa15.99■□□□□ 0.15
SHISA4-201ENST00000362011 PSMG3Q9BT73 122 aaPredicted RBP15.99■□□□□ 0.15
SHISA4-201ENST00000362011 KCNIP2Q9NS61 270 aa15.99■□□□□ 0.15
SHISA4-201ENST00000362011 A0A1B0GUS0 222 aa15.98■□□□□ 0.15
SHISA4-201ENST00000362011 TCRBV4S1A1TA0A5B7 111 aa15.98■□□□□ 0.15
SHISA4-201ENST00000362011 IGLC1P0CG04 106 aa15.98■□□□□ 0.15
SHISA4-201ENST00000362011 SPP1P10451 314 aa15.98■□□□□ 0.15
SHISA4-201ENST00000362011 EIF5AL1Q6IS14 154 aaKnown RBP15.98■□□□□ 0.15
SHISA4-201ENST00000362011 CLEC19AQ6UXS0 136 aa15.98■□□□□ 0.15
SHISA4-201ENST00000362011 CYP2G1PQ6ZSU1 146 aa15.98■□□□□ 0.15
SHISA4-201ENST00000362011 ZNF747Q9BV97 191 aa15.98■□□□□ 0.15
SHISA4-201ENST00000362011 SH3BGRL3Q9H299 93 aa15.98■□□□□ 0.15
SHISA4-201ENST00000362011 SLC25A32Q9H2D1 315 aa15.98■□□□□ 0.15
SHISA4-201ENST00000362011 OR2T8A6NH00 312 aa15.97■□□□□ 0.15
SHISA4-201ENST00000362011 IGHV3-11P01762 117 aa15.97■□□□□ 0.15
SHISA4-201ENST00000362011 SEC11BP0C7V7 166 aa15.97■□□□□ 0.15
SHISA4-201ENST00000362011 GPR183P32249 361 aa15.97■□□□□ 0.15
SHISA4-201ENST00000362011 PROK1P58294 105 aa15.97■□□□□ 0.15
SHISA4-201ENST00000362011 KIAA0141Q14154 515 aaPredicted RBP15.97■□□□□ 0.15
SHISA4-201ENST00000362011 FAM209BQ5JX69 171 aa15.97■□□□□ 0.15
SHISA4-201ENST00000362011 ZNF343Q6P1L6 599 aa15.97■□□□□ 0.15
SHISA4-201ENST00000362011 PHYHIPLQ96FC7 376 aa15.97■□□□□ 0.15
SHISA4-201ENST00000362011 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.96■□□□□ 0.15
SHISA4-201ENST00000362011 CFDP00746 253 aaPredicted RBP15.96■□□□□ 0.15
SHISA4-201ENST00000362011 FABP1P07148 127 aa15.96■□□□□ 0.15
SHISA4-201ENST00000362011 SELENOTP62341 195 aa15.96■□□□□ 0.15
SHISA4-201ENST00000362011 TIGITQ495A1 244 aa15.96■□□□□ 0.15
SHISA4-201ENST00000362011 TEX261Q6UWH6 196 aa15.96■□□□□ 0.15
SHISA4-201ENST00000362011 OR2G3Q8NGZ4 309 aa15.96■□□□□ 0.15
SHISA4-201ENST00000362011 TMED6Q8WW62 240 aa15.96■□□□□ 0.15
SHISA4-201ENST00000362011 UBE2E2Q96LR5 201 aa15.96■□□□□ 0.15
SHISA4-201ENST00000362011 SLC45A2Q9UMX9 530 aa15.96■□□□□ 0.15
SHISA4-201ENST00000362011 RFNGQ9Y644 331 aa15.96■□□□□ 0.15
SHISA4-201ENST00000362011 TRRAPQ9Y4A5 3859 aa15.96■□□□□ 0.15
SHISA4-201ENST00000362011 NUPL2O15504 423 aaKnown RBP15.95■□□□□ 0.14
SHISA4-201ENST00000362011 TGOLN2O43493 480 aa15.95■□□□□ 0.14
SHISA4-201ENST00000362011 CLEC3BP05452 202 aa15.95■□□□□ 0.14
SHISA4-201ENST00000362011 RPL29P47914 159 aaKnown RBP15.95■□□□□ 0.14
SHISA4-201ENST00000362011 ALKAL2Q6UX46 152 aa15.95■□□□□ 0.14
SHISA4-201ENST00000362011 PXMP4Q9Y6I8 212 aa15.95■□□□□ 0.14
SHISA4-201ENST00000362011 IGKV1-17P01599 117 aa15.94■□□□□ 0.14
SHISA4-201ENST00000362011 SERF2P84101 59 aa15.94■□□□□ 0.14
SHISA4-201ENST00000362011 ZNF90Q03938 601 aa15.94■□□□□ 0.14
SHISA4-201ENST00000362011 FOXL1Q12952 345 aa15.94■□□□□ 0.14
SHISA4-201ENST00000362011 TCTEX1D4Q5JR98 221 aa15.94■□□□□ 0.14
SHISA4-201ENST00000362011 MIC13Q5XKP0 118 aa15.94■□□□□ 0.14
SHISA4-201ENST00000362011 SPSB3Q6PJ21 355 aa15.94■□□□□ 0.14
SHISA4-201ENST00000362011 TMEM182Q6ZP80 229 aaPredicted RBP15.94■□□□□ 0.14
SHISA4-201ENST00000362011 BPIFCQ8NFQ6 507 aa15.94■□□□□ 0.14
SHISA4-201ENST00000362011 GNB4Q9HAV0 340 aa15.94■□□□□ 0.14
SHISA4-201ENST00000362011 IFNA7P01567 189 aa15.94■□□□□ 0.14
SHISA4-201ENST00000362011 CTSGP08311 255 aa15.94■□□□□ 0.14
SHISA4-201ENST00000362011 LGALS1P09382 135 aaKnown RBP15.94■□□□□ 0.14
SHISA4-201ENST00000362011 YPEL3P61236 119 aaPredicted RBP15.94■□□□□ 0.14
SHISA4-201ENST00000362011 B2MP61769 119 aa15.94■□□□□ 0.14
SHISA4-201ENST00000362011 PRR20EP86478 221 aa15.94■□□□□ 0.14
SHISA4-201ENST00000362011 PRR20CP86479 221 aa15.94■□□□□ 0.14
SHISA4-201ENST00000362011 PRR20DP86480 221 aa15.94■□□□□ 0.14
SHISA4-201ENST00000362011 PRR20BP86481 221 aa15.94■□□□□ 0.14
SHISA4-201ENST00000362011 PRR20AP86496 221 aa15.94■□□□□ 0.14
SHISA4-201ENST00000362011 IFITM2Q01629 132 aa15.94■□□□□ 0.14
SHISA4-201ENST00000362011 KHDC1LQ5JSQ8 128 aa15.94■□□□□ 0.14
SHISA4-201ENST00000362011 FFAR4Q5NUL3 377 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms