RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 FAM27BQ5VT28 67 aa4.24□□□□□ -1.73
SKP1-202ENST00000353411 SLC37A2Q8TED4 501 aa4.24□□□□□ -1.73
SKP1-202ENST00000353411 LHFPL6Q9Y693 200 aa4.24□□□□□ -1.73
SKP1-202ENST00000353411 IGHV3-7P01780 117 aa4.23□□□□□ -1.73
SKP1-202ENST00000353411 C3AR1Q16581 482 aa4.23□□□□□ -1.73
SKP1-202ENST00000353411 R3HDMLQ9H3Y0 253 aa4.23□□□□□ -1.73
SKP1-202ENST00000353411 FGF22Q9HCT0 170 aa4.23□□□□□ -1.73
SKP1-202ENST00000353411 PNRC2Q9NPJ4 139 aaKnown RBP4.23□□□□□ -1.73
SKP1-202ENST00000353411 SELENOKQ9Y6D0 94 aa4.23□□□□□ -1.73
SKP1-202ENST00000353411 FAM90A9PA6NNJ1 464 aa4.23□□□□□ -1.73
SKP1-202ENST00000353411 CEACAM5P06731 702 aa4.23□□□□□ -1.73
SKP1-202ENST00000353411 C1orf43Q9BWL3 253 aa4.23□□□□□ -1.73
SKP1-202ENST00000353411 OR2H1Q9GZK4 316 aa4.23□□□□□ -1.73
SKP1-202ENST00000353411 GFRA4Q9GZZ7 299 aa4.23□□□□□ -1.73
SKP1-202ENST00000353411 ZNF56Q15929 161 aa4.23□□□□□ -1.73
SKP1-202ENST00000353411 NUP35Q8NFH5 326 aa4.23□□□□□ -1.73
SKP1-202ENST00000353411 ZNF714Q96N38 554 aa4.23□□□□□ -1.73
SKP1-202ENST00000353411 TNFRSF1AP19438 455 aa4.23□□□□□ -1.73
SKP1-202ENST00000353411 H1FXQ92522 213 aaKnown RBP4.23□□□□□ -1.73
SKP1-202ENST00000353411 F5H697 171 aa4.23□□□□□ -1.73
SKP1-202ENST00000353411 K7ESF4 209 aa4.23□□□□□ -1.73
SKP1-202ENST00000353411 IGHV4-34P06331 123 aa4.23□□□□□ -1.73
SKP1-202ENST00000353411 ALKBH6Q3KRA9 238 aa4.23□□□□□ -1.73
SKP1-202ENST00000353411 THAP10Q9P2Z0 257 aaPredicted RBP4.23□□□□□ -1.73
SKP1-202ENST00000353411 TRBV20OR9-2A0A075B6H5 130 aa4.23□□□□□ -1.73
SKP1-202ENST00000353411 IGKV1D-42A0A075B6H8 117 aa4.23□□□□□ -1.73
SKP1-202ENST00000353411 IGKV1D-16P01601 117 aa4.23□□□□□ -1.73
SKP1-202ENST00000353411 ELSPBP1Q96BH3 223 aa4.23□□□□□ -1.73
SKP1-202ENST00000353411 RAB1BQ9H0U4 201 aa4.23□□□□□ -1.73
SKP1-202ENST00000353411 H3BMG7 143 aa4.23□□□□□ -1.73
SKP1-202ENST00000353411 NDUFA3O95167 84 aa4.23□□□□□ -1.73
SKP1-202ENST00000353411 TDRG1Q3Y452 100 aa4.23□□□□□ -1.73
SKP1-202ENST00000353411 WFDC12Q8WWY7 111 aa4.23□□□□□ -1.73
SKP1-202ENST00000353411 ABHD17AQ96GS6 310 aa4.23□□□□□ -1.73
SKP1-202ENST00000353411 A0A1W2PRD5 423 aa4.23□□□□□ -1.73
SKP1-202ENST00000353411 A0A1W2PRF3 423 aa4.23□□□□□ -1.73
SKP1-202ENST00000353411 A0A1W2PRM7 423 aa4.23□□□□□ -1.73
SKP1-202ENST00000353411 H3BMM0 161 aa4.23□□□□□ -1.73
SKP1-202ENST00000353411 FCGR2BP31994 310 aaPredicted RBP4.23□□□□□ -1.73
SKP1-202ENST00000353411 S100A7L2Q5SY68 101 aa4.23□□□□□ -1.73
SKP1-202ENST00000353411 FHL5Q5TD97 284 aa4.23□□□□□ -1.73
SKP1-202ENST00000353411 FOXI2Q6ZQN5 318 aa4.23□□□□□ -1.73
SKP1-202ENST00000353411 Q6ZVH6 145 aa4.23□□□□□ -1.73
SKP1-202ENST00000353411 UBE2WQ96B02 151 aa4.23□□□□□ -1.73
SKP1-202ENST00000353411 CCL26Q9Y258 94 aa4.23□□□□□ -1.73
SKP1-202ENST00000353411 IGHV4-39P01824 125 aa4.22□□□□□ -1.73
SKP1-202ENST00000353411 MNX1P50219 401 aaPredicted RBP4.22□□□□□ -1.73
SKP1-202ENST00000353411 EFNB3Q15768 340 aa4.22□□□□□ -1.73
SKP1-202ENST00000353411 C3orf36Q3SXR2 165 aa4.22□□□□□ -1.73
SKP1-202ENST00000353411 C2orf82Q6UX34 121 aa4.22□□□□□ -1.73
SKP1-202ENST00000353411 RFESDQ8TAC1 157 aa4.22□□□□□ -1.73
SKP1-202ENST00000353411 WDR83OSQ9Y284 106 aa4.22□□□□□ -1.73
SKP1-202ENST00000353411 SIT1Q9Y3P8 196 aa4.22□□□□□ -1.73
SKP1-202ENST00000353411 MYO9AB2RTY4 2548 aa4.22□□□□□ -1.73
SKP1-202ENST00000353411 H0YJW9 148 aa4.22□□□□□ -1.73
SKP1-202ENST00000353411 NDUFC2O95298 119 aa4.22□□□□□ -1.73
SKP1-202ENST00000353411 CCL1P22362 96 aa4.22□□□□□ -1.73
SKP1-202ENST00000353411 SLC25A47Q6Q0C1 308 aa4.22□□□□□ -1.73
SKP1-202ENST00000353411 TMEM14EPQ6UXP3 125 aa4.22□□□□□ -1.73
SKP1-202ENST00000353411 CEND1Q8N111 149 aa4.22□□□□□ -1.73
SKP1-202ENST00000353411 CACNG8Q8WXS5 425 aa4.22□□□□□ -1.73
SKP1-202ENST00000353411 SCGB3A1Q96QR1 104 aa4.22□□□□□ -1.73
SKP1-202ENST00000353411 TCF19Q9Y242 345 aa4.22□□□□□ -1.73
SKP1-202ENST00000353411 A0A096LPE4 126 aa4.22□□□□□ -1.73
SKP1-202ENST00000353411 A0A1W2PPZ6 126 aa4.22□□□□□ -1.73
SKP1-202ENST00000353411 ZNF815PA8K554 130 aa4.22□□□□□ -1.73
SKP1-202ENST00000353411 SCRG1O75711 98 aa4.22□□□□□ -1.73
SKP1-202ENST00000353411 LGALS9BQ3B8N2 356 aa4.22□□□□□ -1.73
SKP1-202ENST00000353411 LGALS9CQ6DKI2 356 aa4.22□□□□□ -1.73
SKP1-202ENST00000353411 TMEM178AQ8NBL3 297 aa4.22□□□□□ -1.73
SKP1-202ENST00000353411 LRRK2Q5S007 2527 aa4.22□□□□□ -1.73
SKP1-202ENST00000353411 IGHV3-15A0A0B4J1V0 119 aa4.22□□□□□ -1.73
SKP1-202ENST00000353411 CCL2P13500 99 aa4.22□□□□□ -1.73
SKP1-202ENST00000353411 C5orf64Q2M2E5 130 aa4.22□□□□□ -1.73
SKP1-202ENST00000353411 DOPEY1Q5JWR5 2465 aa4.22□□□□□ -1.73
SKP1-202ENST00000353411 INO80CQ6PI98 192 aaPredicted RBP4.22□□□□□ -1.73
SKP1-202ENST00000353411 KIR2DL4Q99706 377 aa4.22□□□□□ -1.73
SKP1-202ENST00000353411 ANAPC10Q9UM13 185 aa4.22□□□□□ -1.73
SKP1-202ENST00000353411 HIVEP3Q5T1R4 2406 aa4.22□□□□□ -1.73
SKP1-202ENST00000353411 A0A0A6YYD4 124 aa4.22□□□□□ -1.73
SKP1-202ENST00000353411 VPREB1P12018 145 aa4.22□□□□□ -1.73
SKP1-202ENST00000353411 SRSF1Q07955 248 aaKnown RBP eCLIP4.22□□□□□ -1.73
SKP1-202ENST00000353411 LHX8Q68G74 356 aa4.22□□□□□ -1.73
SKP1-202ENST00000353411 C5orf24Q7Z6I8 188 aa4.22□□□□□ -1.73
SKP1-202ENST00000353411 ZNF721Q8TF20 911 aa4.22□□□□□ -1.73
SKP1-202ENST00000353411 GPHA2Q96T91 129 aa4.22□□□□□ -1.73
SKP1-202ENST00000353411 IGHV3-43A0A0B4J1X8 118 aa4.22□□□□□ -1.73
SKP1-202ENST00000353411 IGHV3-43DP0DP04 118 aa4.22□□□□□ -1.73
SKP1-202ENST00000353411 PRDX2P32119 198 aa4.22□□□□□ -1.73
SKP1-202ENST00000353411 KLF5Q13887 457 aaPredicted RBP4.22□□□□□ -1.73
SKP1-202ENST00000353411 C10orf128Q5T292 105 aa4.22□□□□□ -1.73
SKP1-202ENST00000353411 PRKNO60260 465 aaPredicted RBP4.21□□□□□ -1.73
SKP1-202ENST00000353411 IGHV3-9P01782 118 aa4.21□□□□□ -1.73
SKP1-202ENST00000353411 IGFBP6P24592 240 aaPredicted RBP4.21□□□□□ -1.73
SKP1-202ENST00000353411 CSRP2Q16527 193 aa4.21□□□□□ -1.73
SKP1-202ENST00000353411 ORMDL2Q53FV1 153 aa4.21□□□□□ -1.73
SKP1-202ENST00000353411 VKORC1L1Q8N0U8 176 aa4.21□□□□□ -1.73
SKP1-202ENST00000353411 QRFPP83859 136 aa4.21□□□□□ -1.73
SKP1-202ENST00000353411 IL15RAQ13261 267 aa4.21□□□□□ -1.73
SKP1-202ENST00000353411 C1QL2Q7Z5L3 287 aa4.21□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms