RNA–Protein interactions for RNA: ENST00000324685.10

RNF40-201, Transcript of ring finger protein 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF40, Length 5,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-201ENST00000324685 TIMM23O14925 209 aa17.42■□□□□ 0.38
RNF40-201ENST00000324685 CD5P06127 495 aa17.42■□□□□ 0.38
RNF40-201ENST00000324685 SLC25A48Q6ZT89 311 aaKnown RBP17.42■□□□□ 0.38
RNF40-201ENST00000324685 HIST1H2BLQ99880 126 aa17.42■□□□□ 0.38
RNF40-201ENST00000324685 SPAG8Q99932 426 aaPredicted RBP17.42■□□□□ 0.38
RNF40-201ENST00000324685 SRSF6Q13247 344 aaKnown RBP17.42■□□□□ 0.38
RNF40-201ENST00000324685 VSIRQ9H7M9 311 aa17.42■□□□□ 0.38
RNF40-201ENST00000324685 TREML4Q6UXN2 200 aa17.42■□□□□ 0.38
RNF40-201ENST00000324685 WNT2P09544 360 aa17.42■□□□□ 0.38
RNF40-201ENST00000324685 CRYGSP22914 178 aa17.41■□□□□ 0.38
RNF40-201ENST00000324685 TIMP3P35625 211 aa17.41■□□□□ 0.38
RNF40-201ENST00000324685 SFTA2Q6UW10 78 aa17.41■□□□□ 0.38
RNF40-201ENST00000324685 M0R2P5 195 aa17.41■□□□□ 0.38
RNF40-201ENST00000324685 PPIFP30405 207 aaKnown RBP17.41■□□□□ 0.38
RNF40-201ENST00000324685 CMC4P56277 68 aaPredicted RBP17.41■□□□□ 0.38
RNF40-201ENST00000324685 SAMD5Q5TGI4 173 aa17.41■□□□□ 0.38
RNF40-201ENST00000324685 GFI1Q99684 422 aa17.41■□□□□ 0.38
RNF40-201ENST00000324685 PRR32B1ATL7 298 aa17.41■□□□□ 0.38
RNF40-201ENST00000324685 TRAV1-1A0A0B4J248 108 aa17.41■□□□□ 0.38
RNF40-201ENST00000324685 TMEM238C9JI98 176 aa17.41■□□□□ 0.38
RNF40-201ENST00000324685 ERG28Q9UKR5 140 aa17.41■□□□□ 0.38
RNF40-201ENST00000324685 TNFSF13O75888 250 aa17.4■□□□□ 0.38
RNF40-201ENST00000324685 FOXL1Q12952 345 aa17.4■□□□□ 0.38
RNF40-201ENST00000324685 PRDM6Q9NQX0 595 aa17.4■□□□□ 0.38
RNF40-201ENST00000324685 HIST3H2BBQ8N257 126 aa17.4■□□□□ 0.38
RNF40-201ENST00000324685 TNS1Q9HBL0 1735 aaKnown RBP17.4■□□□□ 0.38
RNF40-201ENST00000324685 TRAV16A0A0A6YYK6 109 aaPredicted RBP17.4■□□□□ 0.38
RNF40-201ENST00000324685 MBNL3Q9NUK0 354 aaKnown RBP17.4■□□□□ 0.38
RNF40-201ENST00000324685 IGHV1-46P01743 117 aa17.39■□□□□ 0.38
RNF40-201ENST00000324685 GAGE13Q4V321 117 aa17.39■□□□□ 0.38
RNF40-201ENST00000324685 FLVCR1-AS1Q8TAF5 88 aa17.39■□□□□ 0.38
RNF40-201ENST00000324685 COL11A1P12107 1806 aaPredicted RBP17.39■□□□□ 0.37
RNF40-201ENST00000324685 IGKV1D-8A0A087WSZ0 117 aa17.39■□□□□ 0.37
RNF40-201ENST00000324685 TFF1P04155 84 aa17.39■□□□□ 0.37
RNF40-201ENST00000324685 GZMBP10144 247 aa17.39■□□□□ 0.37
RNF40-201ENST00000324685 VWCEQ96DN2 955 aa17.39■□□□□ 0.37
RNF40-201ENST00000324685 GGTLC1Q9BX51 225 aa17.39■□□□□ 0.37
RNF40-201ENST00000324685 ZNF319Q9P2F9 582 aa17.39■□□□□ 0.37
RNF40-201ENST00000324685 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP17.39■□□□□ 0.37
RNF40-201ENST00000324685 TRAV5A0A0B4J249 113 aa17.38■□□□□ 0.37
RNF40-201ENST00000324685 TRAV41A0A0B4J266 112 aa17.38■□□□□ 0.37
RNF40-201ENST00000324685 SPRR3Q9UBC9 169 aa17.38■□□□□ 0.37
RNF40-201ENST00000324685 A0A087WV48 116 aa17.38■□□□□ 0.37
RNF40-201ENST00000324685 PRB3Q04118 309 aaPredicted RBP17.38■□□□□ 0.37
RNF40-201ENST00000324685 CD24P25063 80 aa17.38■□□□□ 0.37
RNF40-201ENST00000324685 CD300EQ496F6 205 aaPredicted RBP17.37■□□□□ 0.37
RNF40-201ENST00000324685 VGLL1Q99990 258 aa17.37■□□□□ 0.37
RNF40-201ENST00000324685 CHCHD5Q9BSY4 110 aa17.37■□□□□ 0.37
RNF40-201ENST00000324685 CKS1BP61024 79 aa17.37■□□□□ 0.37
RNF40-201ENST00000324685 GTSCR1Q86UQ5 136 aa17.37■□□□□ 0.37
RNF40-201ENST00000324685 PARP14Q460N5 1801 aa17.37■□□□□ 0.37
RNF40-201ENST00000324685 CFHR1Q03591 330 aa17.37■□□□□ 0.37
RNF40-201ENST00000324685 RPUSD1Q9UJJ7 312 aaKnown RBP17.37■□□□□ 0.37
RNF40-201ENST00000324685 LHFPL1Q86WI0 220 aa17.37■□□□□ 0.37
RNF40-201ENST00000324685 OR10W1Q8NGF6 305 aa17.37■□□□□ 0.37
RNF40-201ENST00000324685 LINC00158P58513 81 aa17.36■□□□□ 0.37
RNF40-201ENST00000324685 S100A7L2Q5SY68 101 aa17.36■□□□□ 0.37
RNF40-201ENST00000324685 PLEKHB2Q96CS7 222 aa17.36■□□□□ 0.37
RNF40-201ENST00000324685 PRADC1Q9BSG0 188 aa17.36■□□□□ 0.37
RNF40-201ENST00000324685 E9PLN8 166 aa17.36■□□□□ 0.37
RNF40-201ENST00000324685 TDGF1P3P51864 188 aa17.36■□□□□ 0.37
RNF40-201ENST00000324685 RNF5Q99942 180 aa17.36■□□□□ 0.37
RNF40-201ENST00000324685 IGHV2-26A0A0B4J1V2 119 aa17.36■□□□□ 0.37
RNF40-201ENST00000324685 CXCL1P09341 107 aa17.36■□□□□ 0.37
RNF40-201ENST00000324685 ZNF236Q9UL36 1845 aa17.36■□□□□ 0.37
RNF40-201ENST00000324685 CKAP5Q14008 2032 aa17.35■□□□□ 0.37
RNF40-201ENST00000324685 NPIPB5A8MRT5 1133 aa17.35■□□□□ 0.37
RNF40-201ENST00000324685 TRGV9Q99603 122 aa17.35■□□□□ 0.37
RNF40-201ENST00000324685 IGKV2-40A0A087WW87 121 aaPredicted RBP17.35■□□□□ 0.37
RNF40-201ENST00000324685 IGKV1-12A0A0C4DH73 117 aa17.35■□□□□ 0.37
RNF40-201ENST00000324685 IGKV1D-12P01611 117 aa17.35■□□□□ 0.37
RNF40-201ENST00000324685 IGKV2D-40P01614 121 aaPredicted RBP17.35■□□□□ 0.37
RNF40-201ENST00000324685 AMBPP02760 352 aa17.35■□□□□ 0.37
RNF40-201ENST00000324685 CYTL1Q9NRR1 136 aa17.35■□□□□ 0.37
RNF40-201ENST00000324685 DICER1Q9UPY3 1922 aaKnown RBP17.35■□□□□ 0.37
RNF40-201ENST00000324685 COLCA2A8K830 154 aa17.35■□□□□ 0.37
RNF40-201ENST00000324685 SLC25A39Q9BZJ4 359 aaPredicted RBP17.35■□□□□ 0.37
RNF40-201ENST00000324685 DSCR9P59020 149 aa17.34■□□□□ 0.37
RNF40-201ENST00000324685 LY96Q9Y6Y9 160 aa17.34■□□□□ 0.37
RNF40-201ENST00000324685 SRRM5B3KS81 715 aa17.34■□□□□ 0.37
RNF40-201ENST00000324685 DTX1Q86Y01 620 aa17.34■□□□□ 0.37
RNF40-201ENST00000324685 FGFBP3Q8TAT2 258 aa17.34■□□□□ 0.37
RNF40-201ENST00000324685 PINLYPA6NC86 204 aa17.34■□□□□ 0.37
RNF40-201ENST00000324685 TMEM8BA6NDV4 472 aa17.34■□□□□ 0.37
RNF40-201ENST00000324685 METRNQ9UJH8 293 aa17.34■□□□□ 0.37
RNF40-201ENST00000324685 RIPPLY3P57055 190 aa17.34■□□□□ 0.37
RNF40-201ENST00000324685 A0A1B0GWJ7 208 aa17.33■□□□□ 0.37
RNF40-201ENST00000324685 D6R8Y8 96 aa17.33■□□□□ 0.37
RNF40-201ENST00000324685 AGMATQ9BSE5 352 aa17.33■□□□□ 0.37
RNF40-201ENST00000324685 OOSP1A8MZH6 123 aa17.33■□□□□ 0.36
RNF40-201ENST00000324685 ZFP36L1Q07352 338 aaKnown RBP17.33■□□□□ 0.36
RNF40-201ENST00000324685 ACTL10Q5JWF8 245 aa17.33■□□□□ 0.36
RNF40-201ENST00000324685 IGHV3-64A0A075B6Q5 118 aa17.33■□□□□ 0.36
RNF40-201ENST00000324685 SPATA31B1PQ5VZV4 182 aa17.33■□□□□ 0.36
RNF40-201ENST00000324685 MGST2Q99735 147 aa17.33■□□□□ 0.36
RNF40-201ENST00000324685 SPSB3Q6PJ21 355 aa17.32■□□□□ 0.36
RNF40-201ENST00000324685 RCHY1Q96PM5 261 aa17.32■□□□□ 0.36
RNF40-201ENST00000324685 PMS2P5A8MQ11 134 aa17.32■□□□□ 0.36
RNF40-201ENST00000324685 LYNX1G3V0Z9 82 aa17.32■□□□□ 0.36
RNF40-201ENST00000324685 MLNRO43193 412 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 163.7 ms