RNA–Protein interactions for RNA: ENST00000324238.6

CRLF3-201, Transcript of cytokine receptor like factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRLF3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-201ENST00000324238 KCNS1Q96KK3 526 aa16.05■□□□□ 0.16
CRLF3-201ENST00000324238 TUBG2Q9NRH3 451 aa16.05■□□□□ 0.16
CRLF3-201ENST00000324238 CACNA1BQ00975 2339 aa16.05■□□□□ 0.16
CRLF3-201ENST00000324238 MALRD1Q5VYJ5 2156 aa16.05■□□□□ 0.16
CRLF3-201ENST00000324238 ENSAO43768 121 aaKnown RBP16.05■□□□□ 0.16
CRLF3-201ENST00000324238 TNXAQ16473 311 aa16.05■□□□□ 0.16
CRLF3-201ENST00000324238 Q71RC1 249 aaPredicted RBP16.05■□□□□ 0.16
CRLF3-201ENST00000324238 ZNF324O75467 553 aaPredicted RBP16.05■□□□□ 0.16
CRLF3-201ENST00000324238 CD40P25942 277 aa16.05■□□□□ 0.16
CRLF3-201ENST00000324238 C2orf83Q53S99 150 aa16.05■□□□□ 0.16
CRLF3-201ENST00000324238 LYPD2Q6UXB3 125 aa16.05■□□□□ 0.16
CRLF3-201ENST00000324238 ZNF841Q6ZN19 808 aa16.05■□□□□ 0.16
CRLF3-201ENST00000324238 PAXXQ9BUH6 204 aa16.05■□□□□ 0.16
CRLF3-201ENST00000324238 GOLT1BQ9Y3E0 138 aa16.05■□□□□ 0.16
CRLF3-201ENST00000324238 LY96Q9Y6Y9 160 aa16.05■□□□□ 0.16
CRLF3-201ENST00000324238 SLC25A17O43808 307 aa16.04■□□□□ 0.16
CRLF3-201ENST00000324238 KIR3DL3Q8N743 410 aa16.04■□□□□ 0.16
CRLF3-201ENST00000324238 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.04■□□□□ 0.16
CRLF3-201ENST00000324238 NUDT10Q8NFP7 164 aa16.04■□□□□ 0.16
CRLF3-201ENST00000324238 NUDT11Q96G61 164 aa16.04■□□□□ 0.16
CRLF3-201ENST00000324238 TXN2Q99757 166 aa16.04■□□□□ 0.16
CRLF3-201ENST00000324238 SAP30LQ9HAJ7 183 aa16.04■□□□□ 0.16
CRLF3-201ENST00000324238 IGLV3-9A0A075B6K5 115 aa16.04■□□□□ 0.16
CRLF3-201ENST00000324238 CGB1A6NKQ9 187 aa16.04■□□□□ 0.16
CRLF3-201ENST00000324238 VWC2LB2RUY7 222 aa16.04■□□□□ 0.16
CRLF3-201ENST00000324238 FOXA3P55318 350 aaPredicted RBP16.04■□□□□ 0.16
CRLF3-201ENST00000324238 C1orf185Q5T7R7 199 aa16.04■□□□□ 0.16
CRLF3-201ENST00000324238 TCF24Q7RTU0 167 aa16.04■□□□□ 0.16
CRLF3-201ENST00000324238 NUP35Q8NFH5 326 aa16.04■□□□□ 0.16
CRLF3-201ENST00000324238 SPTBN1Q01082 2364 aaKnown RBP16.03■□□□□ 0.16
CRLF3-201ENST00000324238 MAP1AP78559 2803 aaPredicted RBP16.03■□□□□ 0.16
CRLF3-201ENST00000324238 TRAV9-1A0A075B6T8 112 aa16.03■□□□□ 0.16
CRLF3-201ENST00000324238 DLEU1O43261 78 aa16.03■□□□□ 0.16
CRLF3-201ENST00000324238 C10orf113Q5VZT2 155 aa16.03■□□□□ 0.16
CRLF3-201ENST00000324238 Q6ZN92 141 aa16.03■□□□□ 0.16
CRLF3-201ENST00000324238 RBMXL3Q8N7X1 1067 aaKnown RBP16.03■□□□□ 0.16
CRLF3-201ENST00000324238 OR10X1Q8NGY0 326 aa16.03■□□□□ 0.16
CRLF3-201ENST00000324238 FAM222BQ8WU58 562 aa16.03■□□□□ 0.16
CRLF3-201ENST00000324238 FLYWCH2Q96CP2 140 aaKnown RBP16.03■□□□□ 0.16
CRLF3-201ENST00000324238 NDUFA4L2Q9NRX3 87 aa16.03■□□□□ 0.16
CRLF3-201ENST00000324238 ZNF257Q9Y2Q1 563 aa16.03■□□□□ 0.16
CRLF3-201ENST00000324238 SMIM27A0A1W2PRY6 76 aa16.03■□□□□ 0.16
CRLF3-201ENST00000324238 H0YJW9 148 aa16.03■□□□□ 0.16
CRLF3-201ENST00000324238 ERHP84090 104 aaKnown RBP16.03■□□□□ 0.16
CRLF3-201ENST00000324238 POU2AF1Q16633 256 aa16.03■□□□□ 0.16
CRLF3-201ENST00000324238 Q56UQ5 140 aa16.03■□□□□ 0.16
CRLF3-201ENST00000324238 WDR73Q6P4I2 378 aa16.03■□□□□ 0.16
CRLF3-201ENST00000324238 RNASEKQ6P5S7 137 aaKnown RBP16.03■□□□□ 0.16
CRLF3-201ENST00000324238 SPACA3Q8IXA5 215 aa16.03■□□□□ 0.16
CRLF3-201ENST00000324238 C1orf174Q8IYL3 243 aa16.03■□□□□ 0.16
CRLF3-201ENST00000324238 C18orf32Q8TCD1 76 aa16.03■□□□□ 0.16
CRLF3-201ENST00000324238 CLEC7AQ9BXN2 247 aa16.03■□□□□ 0.16
CRLF3-201ENST00000324238 ZNF430Q9H8G1 570 aaPredicted RBP16.03■□□□□ 0.16
CRLF3-201ENST00000324238 DPRXA6NFQ7 191 aa16.02■□□□□ 0.16
CRLF3-201ENST00000324238 TMEM200BQ69YZ2 307 aa16.02■□□□□ 0.16
CRLF3-201ENST00000324238 STPG4Q8N801 248 aa16.02■□□□□ 0.16
CRLF3-201ENST00000324238 OR2D3Q8NGH3 330 aa16.02■□□□□ 0.16
CRLF3-201ENST00000324238 OR1B1Q8NGR6 318 aa16.02■□□□□ 0.16
CRLF3-201ENST00000324238 RNF2Q99496 336 aa16.02■□□□□ 0.16
CRLF3-201ENST00000324238 TIMM8BQ9Y5J9 83 aaPredicted RBP16.02■□□□□ 0.16
CRLF3-201ENST00000324238 A0A1W2PRE2 83 aa16.02■□□□□ 0.16
CRLF3-201ENST00000324238 hADV38S2A0JD32 116 aa16.02■□□□□ 0.16
CRLF3-201ENST00000324238 PSMB11A5LHX3 300 aa16.02■□□□□ 0.16
CRLF3-201ENST00000324238 DMRTA1Q5VZB9 504 aa16.02■□□□□ 0.16
CRLF3-201ENST00000324238 LINC00305Q7Z4B0 112 aa16.02■□□□□ 0.16
CRLF3-201ENST00000324238 OR1L8Q8NGR8 309 aa16.02■□□□□ 0.15
CRLF3-201ENST00000324238 ST6GALNAC6Q969X2 333 aa16.02■□□□□ 0.15
CRLF3-201ENST00000324238 CHODLQ9H9P2 273 aa16.02■□□□□ 0.15
CRLF3-201ENST00000324238 HIGD1CA8MV81 97 aa16.01■□□□□ 0.15
CRLF3-201ENST00000324238 DLL1O00548 723 aa16.01■□□□□ 0.15
CRLF3-201ENST00000324238 APOA2P02652 100 aa16.01■□□□□ 0.15
CRLF3-201ENST00000324238 ZNF329Q86UD4 541 aa16.01■□□□□ 0.15
CRLF3-201ENST00000324238 OR5B3Q8NH48 314 aa16.01■□□□□ 0.15
CRLF3-201ENST00000324238 IGFBPL1Q8WX77 278 aa16.01■□□□□ 0.15
CRLF3-201ENST00000324238 CLEC5AQ9NY25 188 aa16.01■□□□□ 0.15
CRLF3-201ENST00000324238 IZUMO1RA6ND01 250 aa16.01■□□□□ 0.15
CRLF3-201ENST00000324238 HYPMO75409 117 aa16.01■□□□□ 0.15
CRLF3-201ENST00000324238 LINC00322Q6ZN03 302 aaPredicted RBP16.01■□□□□ 0.15
CRLF3-201ENST00000324238 MCRIP2Q9BUT9 160 aaKnown RBP16.01■□□□□ 0.15
CRLF3-201ENST00000324238 BET1LQ9NYM9 111 aa16.01■□□□□ 0.15
CRLF3-201ENST00000324238 IGKV1D-37A0A075B6S9 117 aa16■□□□□ 0.15
CRLF3-201ENST00000324238 PEX7O00628 323 aa16■□□□□ 0.15
CRLF3-201ENST00000324238 ITGB1BP1O14713 200 aa16■□□□□ 0.15
CRLF3-201ENST00000324238 CNTFRP26992 372 aa16■□□□□ 0.15
CRLF3-201ENST00000324238 ZNF137PP52743 207 aa16■□□□□ 0.15
CRLF3-201ENST00000324238 BORCS7Q96B45 105 aa16■□□□□ 0.15
CRLF3-201ENST00000324238 TRBV9A0A0B4J1U6 114 aa16■□□□□ 0.15
CRLF3-201ENST00000324238 HLA-DQA1P01909 254 aa16■□□□□ 0.15
CRLF3-201ENST00000324238 HINT1P49773 126 aaPredicted RBP16■□□□□ 0.15
CRLF3-201ENST00000324238 ERASQ7Z444 233 aa16■□□□□ 0.15
CRLF3-201ENST00000324238 PGPA6NDG6 321 aa15.99■□□□□ 0.15
CRLF3-201ENST00000324238 HSBP1O75506 76 aa15.99■□□□□ 0.15
CRLF3-201ENST00000324238 MT-ND6P03923 174 aa15.99■□□□□ 0.15
CRLF3-201ENST00000324238 SLC25A5P05141 298 aaKnown RBP15.99■□□□□ 0.15
CRLF3-201ENST00000324238 BSPH1Q075Z2 132 aa15.99■□□□□ 0.15
CRLF3-201ENST00000324238 C11orf42Q8N5U0 333 aa15.99■□□□□ 0.15
CRLF3-201ENST00000324238 WNK2Q9Y3S1 2297 aa15.99■□□□□ 0.15
CRLF3-201ENST00000324238 TNFSF4P23510 183 aa15.99■□□□□ 0.15
CRLF3-201ENST00000324238 PRR30Q53SZ7 412 aaPredicted RBP15.99■□□□□ 0.15
CRLF3-201ENST00000324238 RALYQ9UKM9 306 aaKnown RBP15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms