RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 PPOXP50336 477 aa14.03□□□□□ -0.16
COL9A1-201ENST00000320755 TPPP2P59282 170 aa14.03□□□□□ -0.16
COL9A1-201ENST00000320755 LINC00305Q7Z4B0 112 aa14.03□□□□□ -0.16
COL9A1-201ENST00000320755 NDUFAF3Q9BU61 184 aa14.03□□□□□ -0.16
COL9A1-201ENST00000320755 PSMB11A5LHX3 300 aa14.02□□□□□ -0.16
COL9A1-201ENST00000320755 IGHV1-8P0DP01 117 aa14.02□□□□□ -0.16
COL9A1-201ENST00000320755 ST6GALNAC6Q969X2 333 aa14.02□□□□□ -0.16
COL9A1-201ENST00000320755 CHODLQ9H9P2 273 aa14.02□□□□□ -0.16
COL9A1-201ENST00000320755 GNB4Q9HAV0 340 aa14.02□□□□□ -0.16
COL9A1-201ENST00000320755 COX7A1P24310 79 aa14.02□□□□□ -0.17
COL9A1-201ENST00000320755 CDKN1AP38936 164 aa14.02□□□□□ -0.17
COL9A1-201ENST00000320755 SELENOTP62341 195 aa14.02□□□□□ -0.17
COL9A1-201ENST00000320755 LEMD1Q68G75 181 aa14.02□□□□□ -0.17
COL9A1-201ENST00000320755 WNK2Q9Y3S1 2297 aa14.01□□□□□ -0.17
COL9A1-201ENST00000320755 IGKV1D-37A0A075B6S9 117 aa14.01□□□□□ -0.17
COL9A1-201ENST00000320755 IGHV1-69-2A0A0G2JMI3 117 aa14.01□□□□□ -0.17
COL9A1-201ENST00000320755 TCRBV4S1A1TA0A5B7 111 aa14.01□□□□□ -0.17
COL9A1-201ENST00000320755 CX3CL1P78423 397 aa14.01□□□□□ -0.17
COL9A1-201ENST00000320755 MRPL32Q9BYC8 188 aaKnown RBP14.01□□□□□ -0.17
COL9A1-201ENST00000320755 OSTCQ9NRP0 149 aa14.01□□□□□ -0.17
COL9A1-201ENST00000320755 SHISA9B4DS77 424 aa14.01□□□□□ -0.17
COL9A1-201ENST00000320755 LINC01560Q8TB33 94 aa14.01□□□□□ -0.17
COL9A1-201ENST00000320755 VN1R17PQ8TDU5 208 aa14.01□□□□□ -0.17
COL9A1-201ENST00000320755 TNFRSF19Q9NS68 423 aa14.01□□□□□ -0.17
COL9A1-201ENST00000320755 CSMD1Q96PZ7 3565 aa14.01□□□□□ -0.17
COL9A1-201ENST00000320755 PRB4P10163 310 aaPredicted RBP14.01□□□□□ -0.17
COL9A1-201ENST00000320755 FOXC1Q12948 553 aa14.01□□□□□ -0.17
COL9A1-201ENST00000320755 TMEM155Q4W5P6 130 aa14.01□□□□□ -0.17
COL9A1-201ENST00000320755 TRAV9-1A0A075B6T8 112 aa14□□□□□ -0.17
COL9A1-201ENST00000320755 ISLRO14498 428 aa14□□□□□ -0.17
COL9A1-201ENST00000320755 DMRTC2Q8IXT2 367 aaPredicted RBP14□□□□□ -0.17
COL9A1-201ENST00000320755 IGF2BP2-AS1Q96M15 143 aa14□□□□□ -0.17
COL9A1-201ENST00000320755 ARL2-SNX15V9GYD0 113 aa14□□□□□ -0.17
COL9A1-201ENST00000320755 BPIFB3P59826 476 aa14□□□□□ -0.17
COL9A1-201ENST00000320755 PNKDQ8N490 385 aa14□□□□□ -0.17
COL9A1-201ENST00000320755 OR1L4Q8NGR5 311 aa14□□□□□ -0.17
COL9A1-201ENST00000320755 AKAP6Q13023 2319 aa14□□□□□ -0.17
COL9A1-201ENST00000320755 C22orf46C9J442 243 aa13.99□□□□□ -0.17
COL9A1-201ENST00000320755 EREGO14944 169 aa13.99□□□□□ -0.17
COL9A1-201ENST00000320755 FAM87AP0C7U9 286 aa13.99□□□□□ -0.17
COL9A1-201ENST00000320755 PAX1P15863 534 aa13.99□□□□□ -0.17
COL9A1-201ENST00000320755 PMCHP20382 165 aa13.99□□□□□ -0.17
COL9A1-201ENST00000320755 SRIP30626 198 aa13.99□□□□□ -0.17
COL9A1-201ENST00000320755 KRTDAPP60985 99 aa13.99□□□□□ -0.17
COL9A1-201ENST00000320755 GNB1LQ9BYB4 327 aa13.99□□□□□ -0.17
COL9A1-201ENST00000320755 TMEM133Q9H2Q1 129 aa13.99□□□□□ -0.17
COL9A1-201ENST00000320755 TNFRSF13BO14836 293 aaPredicted RBP13.99□□□□□ -0.17
COL9A1-201ENST00000320755 ZNF253O75346 499 aa13.99□□□□□ -0.17
COL9A1-201ENST00000320755 MFAP2P55001 183 aa13.99□□□□□ -0.17
COL9A1-201ENST00000320755 DLX6P56179 175 aa13.99□□□□□ -0.17
COL9A1-201ENST00000320755 TMEM136Q6ZRR5 245 aa13.99□□□□□ -0.17
COL9A1-201ENST00000320755 C11orf42Q8N5U0 333 aa13.99□□□□□ -0.17
COL9A1-201ENST00000320755 IGFBPL1Q8WX77 278 aa13.99□□□□□ -0.17
COL9A1-201ENST00000320755 ATG101Q9BSB4 218 aa13.99□□□□□ -0.17
COL9A1-201ENST00000320755 NGBQ9NPG2 151 aa13.99□□□□□ -0.17
COL9A1-201ENST00000320755 PAM16Q9Y3D7 125 aa13.99□□□□□ -0.17
COL9A1-201ENST00000320755 ASCL5Q7RTU5 278 aa13.99□□□□□ -0.17
COL9A1-201ENST00000320755 ZNF329Q86UD4 541 aa13.99□□□□□ -0.17
COL9A1-201ENST00000320755 SIGLECL1Q8N7X8 197 aa13.99□□□□□ -0.17
COL9A1-201ENST00000320755 RCHY1Q96PM5 261 aa13.99□□□□□ -0.17
COL9A1-201ENST00000320755 INSIG2Q9Y5U4 225 aa13.99□□□□□ -0.17
COL9A1-201ENST00000320755 CACNA1BQ00975 2339 aa13.98□□□□□ -0.17
COL9A1-201ENST00000320755 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.98□□□□□ -0.17
COL9A1-201ENST00000320755 PEX7O00628 323 aa13.98□□□□□ -0.17
COL9A1-201ENST00000320755 SLC25A5P05141 298 aaKnown RBP13.98□□□□□ -0.17
COL9A1-201ENST00000320755 MC5RP33032 325 aa13.98□□□□□ -0.17
COL9A1-201ENST00000320755 RPL19P84098 196 aaKnown RBP13.98□□□□□ -0.17
COL9A1-201ENST00000320755 ZNF705AQ6ZN79 300 aaPredicted RBP13.98□□□□□ -0.17
COL9A1-201ENST00000320755 TOX4O94842 621 aa13.98□□□□□ -0.17
COL9A1-201ENST00000320755 RPL27AP46776 148 aaKnown RBP13.98□□□□□ -0.17
COL9A1-201ENST00000320755 PAFAH1B2P68402 229 aa13.98□□□□□ -0.17
COL9A1-201ENST00000320755 OR4A5Q8NH83 315 aa13.98□□□□□ -0.17
COL9A1-201ENST00000320755 RNF2Q99496 336 aa13.98□□□□□ -0.17
COL9A1-201ENST00000320755 CDC42EP3Q9UKI2 254 aa13.98□□□□□ -0.17
COL9A1-201ENST00000320755 IGLC7A0M8Q6 106 aa13.97□□□□□ -0.17
COL9A1-201ENST00000320755 PGPA6NDG6 321 aa13.97□□□□□ -0.17
COL9A1-201ENST00000320755 LY6HO94772 140 aa13.97□□□□□ -0.17
COL9A1-201ENST00000320755 LINC00311Q8N616 119 aa13.97□□□□□ -0.17
COL9A1-201ENST00000320755 FXYD5Q96DB9 178 aa13.97□□□□□ -0.17
COL9A1-201ENST00000320755 ZNF331Q9NQX6 463 aaPredicted RBP13.97□□□□□ -0.17
COL9A1-201ENST00000320755 JKAMPQ9P055 326 aa13.97□□□□□ -0.17
COL9A1-201ENST00000320755 RNF114Q9Y508 228 aa13.97□□□□□ -0.17
COL9A1-201ENST00000320755 FAM90A27PA6NNH2 459 aa13.97□□□□□ -0.17
COL9A1-201ENST00000320755 AMTP48728 403 aa13.97□□□□□ -0.17
COL9A1-201ENST00000320755 MRGPRG-AS1Q2M3A8 158 aa13.97□□□□□ -0.17
COL9A1-201ENST00000320755 SPACA3Q8IXA5 215 aa13.97□□□□□ -0.17
COL9A1-201ENST00000320755 FAM19A2Q8N3H0 131 aa13.97□□□□□ -0.17
COL9A1-201ENST00000320755 CORTO00230 105 aa13.96□□□□□ -0.17
COL9A1-201ENST00000320755 GRNP28799 593 aaKnown RBP13.96□□□□□ -0.17
COL9A1-201ENST00000320755 C1orf194Q5T5A4 169 aa13.96□□□□□ -0.17
COL9A1-201ENST00000320755 WDR73Q6P4I2 378 aa13.96□□□□□ -0.17
COL9A1-201ENST00000320755 FBXL15Q9H469 300 aa13.96□□□□□ -0.17
COL9A1-201ENST00000320755 IGHV2-26A0A0B4J1V2 119 aa13.96□□□□□ -0.17
COL9A1-201ENST00000320755 LGALS7P47929 136 aa13.96□□□□□ -0.17
COL9A1-201ENST00000320755 CAMPP49913 170 aa13.96□□□□□ -0.17
COL9A1-201ENST00000320755 UBE2G1P62253 170 aa13.96□□□□□ -0.17
COL9A1-201ENST00000320755 NUDT10Q8NFP7 164 aa13.96□□□□□ -0.17
COL9A1-201ENST00000320755 NUDT11Q96G61 164 aa13.96□□□□□ -0.17
COL9A1-201ENST00000320755 RALYQ9UKM9 306 aaKnown RBP13.96□□□□□ -0.17
COL9A1-201ENST00000320755 AMY1AP04745 511 aa13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms