RNA–Protein interactions for RNA: ENST00000307522.3

CCDC8-201, Transcript of coiled-coil domain containing 8, humanhuman

APPRIS P1 BASIC

Gene CCDC8, Length 3,213 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC8-201ENST00000307522 MORN5Q5VZ52 161 aa13.24□□□□□ -0.29
CCDC8-201ENST00000307522 RAB1CQ92928 201 aa13.24□□□□□ -0.29
CCDC8-201ENST00000307522 TNFRSF14Q92956 283 aa13.24□□□□□ -0.29
CCDC8-201ENST00000307522 TRAV9-1A0A075B6T8 112 aa13.24□□□□□ -0.29
CCDC8-201ENST00000307522 TRAV17A0A0B4J275 112 aa13.24□□□□□ -0.29
CCDC8-201ENST00000307522 FAM90A10PA6NDY2 464 aa13.24□□□□□ -0.29
CCDC8-201ENST00000307522 FAM90A18PA6NE21 464 aa13.24□□□□□ -0.29
CCDC8-201ENST00000307522 FAM90A16PA6NEW6 464 aa13.24□□□□□ -0.29
CCDC8-201ENST00000307522 FAM90A20PA6NIJ5 464 aa13.24□□□□□ -0.29
CCDC8-201ENST00000307522 FAM90A8PA6NJQ4 464 aa13.24□□□□□ -0.29
CCDC8-201ENST00000307522 FAM90A7PA6NKC0 464 aa13.24□□□□□ -0.29
CCDC8-201ENST00000307522 FAM90A22PA8MWA6 464 aa13.24□□□□□ -0.29
CCDC8-201ENST00000307522 FAM90A12PA8MX19 464 aa13.24□□□□□ -0.29
CCDC8-201ENST00000307522 FAM90A5PA8MXJ8 464 aa13.24□□□□□ -0.29
CCDC8-201ENST00000307522 FAM90A23PA8MXZ1 464 aa13.24□□□□□ -0.29
CCDC8-201ENST00000307522 FAM90A15PP0C7V4 464 aa13.24□□□□□ -0.29
CCDC8-201ENST00000307522 FAM90A13PP0C7W8 464 aa13.24□□□□□ -0.29
CCDC8-201ENST00000307522 FAM90A14PP0C7W9 464 aa13.24□□□□□ -0.29
CCDC8-201ENST00000307522 FAM90A24PP0C7X0 464 aa13.24□□□□□ -0.29
CCDC8-201ENST00000307522 EDDM3AQ14507 147 aa13.24□□□□□ -0.29
CCDC8-201ENST00000307522 FAM201AQ5SY85 155 aa13.24□□□□□ -0.29
CCDC8-201ENST00000307522 Q6P435 159 aa13.24□□□□□ -0.29
CCDC8-201ENST00000307522 C22orf34Q6ZV56 151 aa13.24□□□□□ -0.29
CCDC8-201ENST00000307522 OR4A16Q8NH70 328 aa13.24□□□□□ -0.29
CCDC8-201ENST00000307522 LEAP2Q969E1 77 aa13.24□□□□□ -0.29
CCDC8-201ENST00000307522 SNRNP40Q96DI7 357 aaKnown RBP13.24□□□□□ -0.29
CCDC8-201ENST00000307522 HBZP02008 142 aa13.24□□□□□ -0.29
CCDC8-201ENST00000307522 PLP1P60201 277 aa13.24□□□□□ -0.29
CCDC8-201ENST00000307522 ARF6P62330 175 aa13.24□□□□□ -0.29
CCDC8-201ENST00000307522 GNG5P63218 68 aa13.24□□□□□ -0.29
CCDC8-201ENST00000307522 FAM120AOSQ5T036 256 aa13.24□□□□□ -0.29
CCDC8-201ENST00000307522 ZCCHC24Q8N2G6 241 aaKnown RBP13.24□□□□□ -0.29
CCDC8-201ENST00000307522 OR4S2Q8NH73 311 aa13.24□□□□□ -0.29
CCDC8-201ENST00000307522 COMMD5Q9GZQ3 224 aa13.24□□□□□ -0.29
CCDC8-201ENST00000307522 CACNA1AO00555 2505 aa13.23□□□□□ -0.29
CCDC8-201ENST00000307522 CENPEQ02224 2701 aa13.23□□□□□ -0.29
CCDC8-201ENST00000307522 IZUMO1RA6ND01 250 aa13.23□□□□□ -0.29
CCDC8-201ENST00000307522 C9JCJ5 164 aa13.23□□□□□ -0.29
CCDC8-201ENST00000307522 HOXC12P31275 282 aa13.23□□□□□ -0.29
CCDC8-201ENST00000307522 WDR86Q86TI4 376 aa13.23□□□□□ -0.29
CCDC8-201ENST00000307522 SAP30LQ9HAJ7 183 aa13.23□□□□□ -0.29
CCDC8-201ENST00000307522 F11RQ9Y624 299 aaKnown RBP13.23□□□□□ -0.29
CCDC8-201ENST00000307522 A0A1W2PRE2 83 aa13.23□□□□□ -0.29
CCDC8-201ENST00000307522 H3BTX0 84 aa13.23□□□□□ -0.29
CCDC8-201ENST00000307522 CD5LO43866 347 aa13.23□□□□□ -0.29
CCDC8-201ENST00000307522 P0C879 139 aa13.23□□□□□ -0.29
CCDC8-201ENST00000307522 PPIAL4GP0DN37 164 aa13.23□□□□□ -0.29
CCDC8-201ENST00000307522 CATR1Q13166 79 aa13.23□□□□□ -0.29
CCDC8-201ENST00000307522 ZNF497Q6ZNH5 498 aa13.23□□□□□ -0.29
CCDC8-201ENST00000307522 GALMQ96C23 342 aa13.23□□□□□ -0.29
CCDC8-201ENST00000307522 ASCL2Q99929 193 aa13.23□□□□□ -0.29
CCDC8-201ENST00000307522 COL25A1Q9BXS0 654 aaPredicted RBP13.23□□□□□ -0.29
CCDC8-201ENST00000307522 RPL39P5Q59GN2 51 aa13.22□□□□□ -0.29
CCDC8-201ENST00000307522 SVIPQ8NHG7 77 aa13.22□□□□□ -0.29
CCDC8-201ENST00000307522 PRDM14Q9GZV8 571 aa13.22□□□□□ -0.29
CCDC8-201ENST00000307522 SMIM27A0A1W2PRY6 76 aa13.22□□□□□ -0.29
CCDC8-201ENST00000307522 C22orf46C9J442 243 aa13.22□□□□□ -0.29
CCDC8-201ENST00000307522 ZADH2Q8N4Q0 377 aa13.22□□□□□ -0.29
CCDC8-201ENST00000307522 Q8TCH9 128 aa13.22□□□□□ -0.29
CCDC8-201ENST00000307522 ST20Q9HBF5 79 aa13.22□□□□□ -0.29
CCDC8-201ENST00000307522 PPIAL4CA0A0B4J2A2 164 aa13.22□□□□□ -0.29
CCDC8-201ENST00000307522 NCR2O95944 276 aa13.22□□□□□ -0.29
CCDC8-201ENST00000307522 PYYP10082 97 aa13.22□□□□□ -0.29
CCDC8-201ENST00000307522 RBPJQ06330 500 aa13.22□□□□□ -0.29
CCDC8-201ENST00000307522 TBC1D28Q2M2D7 210 aa13.22□□□□□ -0.29
CCDC8-201ENST00000307522 SPRNQ5BIV9 151 aa13.22□□□□□ -0.29
CCDC8-201ENST00000307522 UTF1Q5T230 341 aa13.22□□□□□ -0.29
CCDC8-201ENST00000307522 ZNF503Q96F45 646 aa13.22□□□□□ -0.29
CCDC8-201ENST00000307522 SCRT2Q9NQ03 307 aa13.22□□□□□ -0.29
CCDC8-201ENST00000307522 TEX48A0A1B0GUV7 120 aa13.21□□□□□ -0.29
CCDC8-201ENST00000307522 FAM27E3Q08E93 113 aa13.21□□□□□ -0.29
CCDC8-201ENST00000307522 SRSF7Q16629 238 aaKnown RBP eCLIP13.21□□□□□ -0.29
CCDC8-201ENST00000307522 ABHD17AQ96GS6 310 aa13.21□□□□□ -0.29
CCDC8-201ENST00000307522 SCNM1Q9BWG6 230 aa13.21□□□□□ -0.29
CCDC8-201ENST00000307522 OSTCQ9NRP0 149 aa13.21□□□□□ -0.29
CCDC8-201ENST00000307522 KCNIP1Q9NZI2 227 aa13.21□□□□□ -0.29
CCDC8-201ENST00000307522 ZNF835Q9Y2P0 537 aa13.21□□□□□ -0.29
CCDC8-201ENST00000307522 M0R1B8 84 aa13.21□□□□□ -0.29
CCDC8-201ENST00000307522 HIST1H1EP10412 219 aaKnown RBP13.21□□□□□ -0.29
CCDC8-201ENST00000307522 PGLYRP4Q96LB8 373 aa13.21□□□□□ -0.29
CCDC8-201ENST00000307522 METRNQ9UJH8 293 aa13.21□□□□□ -0.29
CCDC8-201ENST00000307522 PRR33A8MZF0 331 aa13.2□□□□□ -0.3
CCDC8-201ENST00000307522 FAM87AP0C7U9 286 aa13.2□□□□□ -0.3
CCDC8-201ENST00000307522 CEACAM3P40198 252 aa13.2□□□□□ -0.3
CCDC8-201ENST00000307522 COLCA1Q6ZS62 124 aa13.2□□□□□ -0.3
CCDC8-201ENST00000307522 C2orf91Q6ZV80 131 aa13.2□□□□□ -0.3
CCDC8-201ENST00000307522 BPIFA4PQ86YQ2 179 aa13.2□□□□□ -0.3
CCDC8-201ENST00000307522 LINC00470Q9BZP3 86 aa13.2□□□□□ -0.3
CCDC8-201ENST00000307522 MT-CO2P00403 227 aa13.2□□□□□ -0.3
CCDC8-201ENST00000307522 GNG3P63215 75 aa13.2□□□□□ -0.3
CCDC8-201ENST00000307522 ZNF788Q6ZQV5 615 aa13.2□□□□□ -0.3
CCDC8-201ENST00000307522 CACNA1BQ00975 2339 aa13.2□□□□□ -0.3
CCDC8-201ENST00000307522 IGHV3OR15-7A0A075B7D8 119 aa13.2□□□□□ -0.3
CCDC8-201ENST00000307522 TIMM8AO60220 97 aaPredicted RBP13.2□□□□□ -0.3
CCDC8-201ENST00000307522 GFRA3O60609 400 aa13.2□□□□□ -0.3
CCDC8-201ENST00000307522 TEPPQ6URK8 271 aa13.2□□□□□ -0.3
CCDC8-201ENST00000307522 SEM1Q6ZVN7 128 aa13.2□□□□□ -0.3
CCDC8-201ENST00000307522 KLF14Q8TD94 323 aaPredicted RBP13.2□□□□□ -0.3
CCDC8-201ENST00000307522 C11orf52Q96A22 123 aa13.2□□□□□ -0.3
CCDC8-201ENST00000307522 NABP2Q9BQ15 211 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms