RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 PCP4P48539 62 aa4.35□□□□□ -1.71
VPS50-202ENST00000305866 GNG10P50151 68 aa4.35□□□□□ -1.71
VPS50-202ENST00000305866 PRAMEF6Q5VXH4 476 aa4.35□□□□□ -1.71
VPS50-202ENST00000305866 TEPPQ6URK8 271 aa4.35□□□□□ -1.71
VPS50-202ENST00000305866 NUDT10Q8NFP7 164 aa4.35□□□□□ -1.71
VPS50-202ENST00000305866 FAM57AQ8TBR7 257 aa4.35□□□□□ -1.71
VPS50-202ENST00000305866 NUDT11Q96G61 164 aa4.35□□□□□ -1.71
VPS50-202ENST00000305866 SH2D7A6NKC9 451 aaPredicted RBP4.35□□□□□ -1.71
VPS50-202ENST00000305866 THBDP07204 575 aa4.35□□□□□ -1.71
VPS50-202ENST00000305866 SRIP30626 198 aa4.35□□□□□ -1.71
VPS50-202ENST00000305866 GABRA2P47869 451 aa4.35□□□□□ -1.71
VPS50-202ENST00000305866 FXYD3Q14802 87 aa4.35□□□□□ -1.71
VPS50-202ENST00000305866 USF2Q15853 346 aaPredicted RBP4.35□□□□□ -1.71
VPS50-202ENST00000305866 FBXL19-AS1Q494R0 122 aa4.35□□□□□ -1.71
VPS50-202ENST00000305866 CT83Q5H943 113 aa4.35□□□□□ -1.71
VPS50-202ENST00000305866 LINC01545Q5VT33 79 aa4.35□□□□□ -1.71
VPS50-202ENST00000305866 NINJ1Q92982 152 aa4.35□□□□□ -1.71
VPS50-202ENST00000305866 TMEM167BQ9NRX6 74 aa4.35□□□□□ -1.71
VPS50-202ENST00000305866 RNF7Q9UBF6 113 aa4.35□□□□□ -1.71
VPS50-202ENST00000305866 NCR2O95944 276 aa4.34□□□□□ -1.71
VPS50-202ENST00000305866 HNF1AP20823 631 aa4.34□□□□□ -1.71
VPS50-202ENST00000305866 SLC25A24Q6NUK1 477 aa4.34□□□□□ -1.71
VPS50-202ENST00000305866 ZNF705AQ6ZN79 300 aaPredicted RBP4.34□□□□□ -1.71
VPS50-202ENST00000305866 DEFB123Q8N688 67 aa4.34□□□□□ -1.71
VPS50-202ENST00000305866 SLC24A4Q8NFF2 622 aa4.34□□□□□ -1.71
VPS50-202ENST00000305866 OR9G1Q8NH87 305 aa4.34□□□□□ -1.71
VPS50-202ENST00000305866 PHLDA1Q8WV24 401 aaPredicted RBP4.34□□□□□ -1.71
VPS50-202ENST00000305866 SSMEM1Q8WWF3 244 aa4.34□□□□□ -1.71
VPS50-202ENST00000305866 ZNF48Q96MX3 618 aaPredicted RBP4.34□□□□□ -1.71
VPS50-202ENST00000305866 RNF5Q99942 180 aa4.34□□□□□ -1.71
VPS50-202ENST00000305866 NABP2Q9BQ15 211 aa4.34□□□□□ -1.71
VPS50-202ENST00000305866 ZNRD1Q9P1U0 126 aa4.34□□□□□ -1.71
VPS50-202ENST00000305866 KCNS2Q9ULS6 477 aa4.34□□□□□ -1.71
VPS50-202ENST00000305866 PSG11Q9UQ72 335 aa4.34□□□□□ -1.71
VPS50-202ENST00000305866 CUL9Q8IWT3 2517 aa4.34□□□□□ -1.71
VPS50-202ENST00000305866 TRAV30A0A087WSZ9 112 aa4.34□□□□□ -1.71
VPS50-202ENST00000305866 LY6LH3BQJ8 138 aa4.34□□□□□ -1.71
VPS50-202ENST00000305866 TCF21O43680 179 aa4.34□□□□□ -1.71
VPS50-202ENST00000305866 TIMM8AO60220 97 aaPredicted RBP4.34□□□□□ -1.71
VPS50-202ENST00000305866 GRPP07492 148 aa4.34□□□□□ -1.71
VPS50-202ENST00000305866 CD24P25063 80 aa4.34□□□□□ -1.71
VPS50-202ENST00000305866 CRIP1P50238 77 aa4.34□□□□□ -1.71
VPS50-202ENST00000305866 DHRS13Q6UX07 377 aa4.34□□□□□ -1.71
VPS50-202ENST00000305866 NEGR1Q7Z3B1 354 aa4.34□□□□□ -1.71
VPS50-202ENST00000305866 PDPNQ86YL7 162 aa4.34□□□□□ -1.71
VPS50-202ENST00000305866 RBMXL3Q8N7X1 1067 aaKnown RBP4.34□□□□□ -1.71
VPS50-202ENST00000305866 NEU4Q8WWR8 484 aaPredicted RBP4.34□□□□□ -1.71
VPS50-202ENST00000305866 S1PR3Q99500 378 aa4.34□□□□□ -1.71
VPS50-202ENST00000305866 AMMECR1Q9Y4X0 333 aaPredicted RBP4.34□□□□□ -1.71
VPS50-202ENST00000305866 MDFIC2A0A1B0GVS7 189 aa4.34□□□□□ -1.72
VPS50-202ENST00000305866 DEFB108AA8MXU0 73 aa4.34□□□□□ -1.72
VPS50-202ENST00000305866 HLA-DQA1P01909 254 aa4.34□□□□□ -1.72
VPS50-202ENST00000305866 FTH1P19P0C7X4 201 aa4.34□□□□□ -1.72
VPS50-202ENST00000305866 WT1-ASQ06250 92 aa4.34□□□□□ -1.72
VPS50-202ENST00000305866 CD69Q07108 199 aa4.34□□□□□ -1.72
VPS50-202ENST00000305866 ATP1A1-AS1Q5TC04 95 aa4.34□□□□□ -1.72
VPS50-202ENST00000305866 ADAMTSL5Q6ZMM2 481 aa4.34□□□□□ -1.72
VPS50-202ENST00000305866 ATP5L2Q7Z4Y8 100 aa4.34□□□□□ -1.72
VPS50-202ENST00000305866 ZCCHC24Q8N2G6 241 aaKnown RBP4.34□□□□□ -1.72
VPS50-202ENST00000305866 DUSP13Q9UII6 198 aa4.34□□□□□ -1.72
VPS50-202ENST00000305866 TRAV8-6A0A0B4J262 113 aa4.33□□□□□ -1.72
VPS50-202ENST00000305866 FAM231BA6NCW3 169 aa4.33□□□□□ -1.72
VPS50-202ENST00000305866 M0QZ24 198 aa4.33□□□□□ -1.72
VPS50-202ENST00000305866 NPY1RP25929 384 aa4.33□□□□□ -1.72
VPS50-202ENST00000305866 SAPCD1Q5SSQ6 148 aa4.33□□□□□ -1.72
VPS50-202ENST00000305866 WDR73Q6P4I2 378 aa4.33□□□□□ -1.72
VPS50-202ENST00000305866 ABHD17AQ96GS6 310 aa4.33□□□□□ -1.72
VPS50-202ENST00000305866 OR2V2Q96R30 315 aa4.33□□□□□ -1.72
VPS50-202ENST00000305866 NDFIP1Q9BT67 221 aa4.33□□□□□ -1.72
VPS50-202ENST00000305866 ZMAT4Q9H898 229 aa4.33□□□□□ -1.72
VPS50-202ENST00000305866 TMEM14CQ9P0S9 112 aa4.33□□□□□ -1.72
VPS50-202ENST00000305866 ZNF492Q9P255 531 aa4.33□□□□□ -1.72
VPS50-202ENST00000305866 HELTA6NFD8 242 aa4.33□□□□□ -1.72
VPS50-202ENST00000305866 C16orf97H3BN30 126 aa4.33□□□□□ -1.72
VPS50-202ENST00000305866 NKX2-8O15522 239 aa4.33□□□□□ -1.72
VPS50-202ENST00000305866 MT-CO2P00403 227 aa4.33□□□□□ -1.72
VPS50-202ENST00000305866 IGLC1P0CG04 106 aa4.33□□□□□ -1.72
VPS50-202ENST00000305866 RPL8P62917 257 aaKnown RBP4.33□□□□□ -1.72
VPS50-202ENST00000305866 ZNF90Q03938 601 aa4.33□□□□□ -1.72
VPS50-202ENST00000305866 FBLN7Q53RD9 439 aa4.33□□□□□ -1.72
VPS50-202ENST00000305866 ASCL5Q7RTU5 278 aa4.33□□□□□ -1.72
VPS50-202ENST00000305866 ZNF709Q8N972 641 aa4.33□□□□□ -1.72
VPS50-202ENST00000305866 OR2Z1Q8NG97 314 aa4.33□□□□□ -1.72
VPS50-202ENST00000305866 OR4A16Q8NH70 328 aa4.33□□□□□ -1.72
VPS50-202ENST00000305866 GRAMD2BQ96HH9 432 aa4.33□□□□□ -1.72
VPS50-202ENST00000305866 CBY1Q9Y3M2 126 aa4.33□□□□□ -1.72
VPS50-202ENST00000305866 WI2-2373I1.2A0A1W2PRP0 233 aa4.33□□□□□ -1.72
VPS50-202ENST00000305866 OR7C2O60412 319 aa4.33□□□□□ -1.72
VPS50-202ENST00000305866 FCGR3BO75015 233 aa4.33□□□□□ -1.72
VPS50-202ENST00000305866 CD40P25942 277 aa4.33□□□□□ -1.72
VPS50-202ENST00000305866 LY6G5BQ8NDX9 201 aa4.33□□□□□ -1.72
VPS50-202ENST00000305866 OR10W1Q8NGF6 305 aa4.33□□□□□ -1.72
VPS50-202ENST00000305866 TMEM186Q96B77 213 aa4.33□□□□□ -1.72
VPS50-202ENST00000305866 GFRA4Q9GZZ7 299 aa4.33□□□□□ -1.72
VPS50-202ENST00000305866 OR51B2Q9Y5P1 312 aa4.33□□□□□ -1.72
VPS50-202ENST00000305866 INTS1Q8N201 2190 aaKnown RBP4.32□□□□□ -1.72
VPS50-202ENST00000305866 MGAQ8IWI9 3026 aa4.32□□□□□ -1.72
VPS50-202ENST00000305866 SYS1-DBNDD2H3BUS1 97 aa4.32□□□□□ -1.72
VPS50-202ENST00000305866 IGHG4P01861 327 aa4.32□□□□□ -1.72
VPS50-202ENST00000305866 FAM106CPP0CH98 169 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms