RNA–Protein interactions for RNA: ENST00000303407.11

BRD3-201, Transcript of bromodomain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BRD3, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-201ENST00000303407 H0YJW9 148 aa13.45□□□□□ -0.26
BRD3-201ENST00000303407 ST6GALNAC6Q969X2 333 aa13.44□□□□□ -0.26
BRD3-201ENST00000303407 SEPSECSQ9HD40 501 aaKnown RBP13.44□□□□□ -0.26
BRD3-201ENST00000303407 NRN1Q9NPD7 142 aa13.44□□□□□ -0.26
BRD3-201ENST00000303407 IGHV1-3A0A0C4DH29 117 aa13.44□□□□□ -0.26
BRD3-201ENST00000303407 CEACAM4O75871 244 aa13.44□□□□□ -0.26
BRD3-201ENST00000303407 RHOGP84095 191 aa13.44□□□□□ -0.26
BRD3-201ENST00000303407 PRSS8Q16651 343 aa13.44□□□□□ -0.26
BRD3-201ENST00000303407 ZNF474Q6S9Z5 364 aaPredicted RBP13.44□□□□□ -0.26
BRD3-201ENST00000303407 LOC107984156A0A0G2JMH3 177 aa13.44□□□□□ -0.26
BRD3-201ENST00000303407 VMO1Q7Z5L0 202 aa13.44□□□□□ -0.26
BRD3-201ENST00000303407 ARL17AQ8IVW1 177 aa13.44□□□□□ -0.26
BRD3-201ENST00000303407 GNB1LQ9BYB4 327 aa13.44□□□□□ -0.26
BRD3-201ENST00000303407 NUP210Q8TEM1 1887 aaPredicted RBP13.44□□□□□ -0.26
BRD3-201ENST00000303407 TP53BP1Q12888 1972 aaPredicted RBP13.44□□□□□ -0.26
BRD3-201ENST00000303407 ORMDL3Q8N138 153 aa13.44□□□□□ -0.26
BRD3-201ENST00000303407 PSG8Q9UQ74 426 aa13.44□□□□□ -0.26
BRD3-201ENST00000303407 IGKV1-6A0A0C4DH72 117 aa13.43□□□□□ -0.26
BRD3-201ENST00000303407 CA1P00915 261 aaPredicted RBP13.43□□□□□ -0.26
BRD3-201ENST00000303407 C1orf147Q96MC9 270 aaPredicted RBP13.43□□□□□ -0.26
BRD3-201ENST00000303407 DERL1Q9BUN8 251 aa13.43□□□□□ -0.26
BRD3-201ENST00000303407 KLRD1Q13241 179 aa13.43□□□□□ -0.26
BRD3-201ENST00000303407 Q6ZRM9 215 aa13.43□□□□□ -0.26
BRD3-201ENST00000303407 MBNL3Q9NUK0 354 aaKnown RBP13.43□□□□□ -0.26
BRD3-201ENST00000303407 PLXND1Q9Y4D7 1925 aa13.43□□□□□ -0.26
BRD3-201ENST00000303407 LINC00587B1AMM8 73 aa13.43□□□□□ -0.26
BRD3-201ENST00000303407 NPFFO15130 113 aa13.43□□□□□ -0.26
BRD3-201ENST00000303407 ADCYAP1P18509 176 aa13.42□□□□□ -0.26
BRD3-201ENST00000303407 NTF4P34130 210 aa13.42□□□□□ -0.26
BRD3-201ENST00000303407 PRB4P10163 310 aaPredicted RBP13.42□□□□□ -0.26
BRD3-201ENST00000303407 SLC50A1Q9BRV3 221 aa13.42□□□□□ -0.26
BRD3-201ENST00000303407 TRBV24-1A0A075B6N3 115 aa13.42□□□□□ -0.26
BRD3-201ENST00000303407 OR10J3Q5JRS4 329 aa13.42□□□□□ -0.26
BRD3-201ENST00000303407 TPTE2P1Q5T6R2 138 aa13.42□□□□□ -0.26
BRD3-201ENST00000303407 ZNF600Q6ZNG1 722 aa13.42□□□□□ -0.26
BRD3-201ENST00000303407 PARD6GQ9BYG4 376 aaPredicted RBP13.42□□□□□ -0.26
BRD3-201ENST00000303407 CEP290O15078 2479 aa13.42□□□□□ -0.26
BRD3-201ENST00000303407 C15orf62A8K5M9 175 aa13.42□□□□□ -0.26
BRD3-201ENST00000303407 Q6ZS92 163 aa13.42□□□□□ -0.26
BRD3-201ENST00000303407 FAM169BQ8N8A8 192 aa13.42□□□□□ -0.26
BRD3-201ENST00000303407 TMEM167AQ8TBQ9 72 aa13.42□□□□□ -0.26
BRD3-201ENST00000303407 ERASQ7Z444 233 aa13.41□□□□□ -0.26
BRD3-201ENST00000303407 AGMATQ9BSE5 352 aa13.41□□□□□ -0.26
BRD3-201ENST00000303407 K7ERU9 68 aa13.41□□□□□ -0.26
BRD3-201ENST00000303407 SNAI2O43623 268 aa13.41□□□□□ -0.26
BRD3-201ENST00000303407 FAM71F2Q6NXP2 309 aa13.41□□□□□ -0.26
BRD3-201ENST00000303407 FOXC2Q99958 501 aa13.41□□□□□ -0.26
BRD3-201ENST00000303407 MIEN1Q9BRT3 115 aa13.41□□□□□ -0.26
BRD3-201ENST00000303407 FABP5P3A8MUU1 101 aa13.41□□□□□ -0.26
BRD3-201ENST00000303407 GFI1BQ5VTD9 330 aa13.41□□□□□ -0.26
BRD3-201ENST00000303407 TSKUQ8WUA8 353 aa13.41□□□□□ -0.26
BRD3-201ENST00000303407 TGFAP01135 160 aa13.41□□□□□ -0.26
BRD3-201ENST00000303407 WNT2P09544 360 aa13.41□□□□□ -0.26
BRD3-201ENST00000303407 ZNF585BQ52M93 769 aa13.41□□□□□ -0.26
BRD3-201ENST00000303407 HIST3H2BBQ8N257 126 aa13.41□□□□□ -0.26
BRD3-201ENST00000303407 NUDT10Q8NFP7 164 aa13.41□□□□□ -0.26
BRD3-201ENST00000303407 NUDT11Q96G61 164 aa13.41□□□□□ -0.26
BRD3-201ENST00000303407 PAX1P15863 534 aa13.4□□□□□ -0.26
BRD3-201ENST00000303407 LINC01551Q86U37 167 aa13.4□□□□□ -0.26
BRD3-201ENST00000303407 ARL6IP6Q8N6S5 226 aa13.4□□□□□ -0.26
BRD3-201ENST00000303407 HIST1H2BLQ99880 126 aa13.4□□□□□ -0.26
BRD3-201ENST00000303407 KIAA1671Q9BY89 1806 aa13.4□□□□□ -0.26
BRD3-201ENST00000303407 JOSD1Q15040 202 aaPredicted RBP13.4□□□□□ -0.26
BRD3-201ENST00000303407 C21orf62-AS1Q17RA5 79 aa13.4□□□□□ -0.26
BRD3-201ENST00000303407 LYPD2Q6UXB3 125 aa13.4□□□□□ -0.26
BRD3-201ENST00000303407 SMIM12Q96EX1 92 aa13.4□□□□□ -0.26
BRD3-201ENST00000303407 SCGB3A1Q96QR1 104 aa13.4□□□□□ -0.26
BRD3-201ENST00000303407 TRIOBPQ9H2D6 2365 aa13.4□□□□□ -0.26
BRD3-201ENST00000303407 TRAV8-6A0A0B4J262 113 aa13.4□□□□□ -0.26
BRD3-201ENST00000303407 LEPP41159 167 aa13.4□□□□□ -0.26
BRD3-201ENST00000303407 ZNF503-AS2A6NEH8 195 aa13.39□□□□□ -0.27
BRD3-201ENST00000303407 MST1LQ2TV78 715 aa13.39□□□□□ -0.27
BRD3-201ENST00000303407 GLMPQ8WWB7 406 aa13.39□□□□□ -0.27
BRD3-201ENST00000303407 ASCL2Q99929 193 aa13.39□□□□□ -0.27
BRD3-201ENST00000303407 ATP5LO75964 103 aa13.39□□□□□ -0.27
BRD3-201ENST00000303407 KIR3DL3Q8N743 410 aa13.39□□□□□ -0.27
BRD3-201ENST00000303407 PSG1P11464 419 aa13.39□□□□□ -0.27
BRD3-201ENST00000303407 SCRT1Q9BWW7 348 aa13.39□□□□□ -0.27
BRD3-201ENST00000303407 PLXNB3Q9ULL4 1909 aa13.39□□□□□ -0.27
BRD3-201ENST00000303407 ADIPOQQ15848 244 aa13.39□□□□□ -0.27
BRD3-201ENST00000303407 SLC25A39Q9BZJ4 359 aaPredicted RBP13.39□□□□□ -0.27
BRD3-201ENST00000303407 BUB1B-PAK6H3BSN5 160 aa13.38□□□□□ -0.27
BRD3-201ENST00000303407 PPP1R17O96001 155 aa13.38□□□□□ -0.27
BRD3-201ENST00000303407 SMIM13P0DJ93 91 aa13.38□□□□□ -0.27
BRD3-201ENST00000303407 PLP1P60201 277 aa13.38□□□□□ -0.27
BRD3-201ENST00000303407 TRGV9Q99603 122 aa13.38□□□□□ -0.27
BRD3-201ENST00000303407 FOXL1Q12952 345 aa13.38□□□□□ -0.27
BRD3-201ENST00000303407 DUX3Q96PT4 197 aa13.38□□□□□ -0.27
BRD3-201ENST00000303407 TRAV40A0A0B4J280 105 aa13.38□□□□□ -0.27
BRD3-201ENST00000303407 OR11H12B2RN74 326 aa13.38□□□□□ -0.27
BRD3-201ENST00000303407 OR11H1Q8NG94 326 aa13.38□□□□□ -0.27
BRD3-201ENST00000303407 OR11H2Q8NH07 326 aa13.38□□□□□ -0.27
BRD3-201ENST00000303407 ITLN2Q8WWU7 325 aaPredicted RBP13.37□□□□□ -0.27
BRD3-201ENST00000303407 NEUROG1Q92886 237 aa13.37□□□□□ -0.27
BRD3-201ENST00000303407 PRDM13Q9H4Q3 707 aa13.37□□□□□ -0.27
BRD3-201ENST00000303407 TMEM170BQ5T4T1 132 aa13.37□□□□□ -0.27
BRD3-201ENST00000303407 EXOC3-AS1Q8N2X6 119 aa13.37□□□□□ -0.27
BRD3-201ENST00000303407 COX6CP09669 75 aa13.37□□□□□ -0.27
BRD3-201ENST00000303407 ACTL10Q5JWF8 245 aa13.37□□□□□ -0.27
BRD3-201ENST00000303407 PMS2P5A8MQ11 134 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms