RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 A0A1B0GW15 77 aa14.27□□□□□ -0.12
SHANK1-201ENST00000293441 PSG8Q9UQ74 426 aa14.27□□□□□ -0.12
SHANK1-201ENST00000293441 FAM19A2Q8N3H0 131 aa14.27□□□□□ -0.12
SHANK1-201ENST00000293441 CRIM1Q9NZV1 1036 aa14.27□□□□□ -0.12
SHANK1-201ENST00000293441 LY6HO94772 140 aa14.27□□□□□ -0.12
SHANK1-201ENST00000293441 RPL15P61313 204 aaKnown RBP14.27□□□□□ -0.12
SHANK1-201ENST00000293441 ST6GALNAC6Q969X2 333 aa14.27□□□□□ -0.12
SHANK1-201ENST00000293441 TMEM183AQ8IXX5 376 aa14.27□□□□□ -0.13
SHANK1-201ENST00000293441 RPUSD1Q9UJJ7 312 aaKnown RBP14.27□□□□□ -0.13
SHANK1-201ENST00000293441 COL4A6Q14031 1691 aa14.27□□□□□ -0.13
SHANK1-201ENST00000293441 TRBV7-9A0A0J9YWB2 115 aa14.27□□□□□ -0.13
SHANK1-201ENST00000293441 K7ERU9 68 aa14.27□□□□□ -0.13
SHANK1-201ENST00000293441 SRSF7Q16629 238 aaKnown RBP eCLIP14.27□□□□□ -0.13
SHANK1-201ENST00000293441 SSBP4Q9BWG4 385 aaPredicted RBP14.27□□□□□ -0.13
SHANK1-201ENST00000293441 VCX2Q9H322 139 aa14.27□□□□□ -0.13
SHANK1-201ENST00000293441 DPH3P1Q9H4G8 78 aa14.27□□□□□ -0.13
SHANK1-201ENST00000293441 C1QTNF9BB2RNN3 333 aa14.26□□□□□ -0.13
SHANK1-201ENST00000293441 J3QRE1 110 aa14.26□□□□□ -0.13
SHANK1-201ENST00000293441 EVI2AP22794 236 aa14.26□□□□□ -0.13
SHANK1-201ENST00000293441 FAM89BQ8N5H3 189 aa14.26□□□□□ -0.13
SHANK1-201ENST00000293441 RNF126Q9BV68 326 aa14.26□□□□□ -0.13
SHANK1-201ENST00000293441 COTL1Q14019 142 aa14.26□□□□□ -0.13
SHANK1-201ENST00000293441 TRGV11A0A075B6L2 103 aa14.26□□□□□ -0.13
SHANK1-201ENST00000293441 IGKV1-27A0A075B6S5 117 aa14.26□□□□□ -0.13
SHANK1-201ENST00000293441 RPL35AP18077 110 aaKnown RBP14.26□□□□□ -0.13
SHANK1-201ENST00000293441 IFI27P40305 119 aaPredicted RBP14.26□□□□□ -0.13
SHANK1-201ENST00000293441 OR9G4Q8NGQ1 327 aa14.26□□□□□ -0.13
SHANK1-201ENST00000293441 NEUROG1Q92886 237 aa14.26□□□□□ -0.13
SHANK1-201ENST00000293441 KLHDC3Q9BQ90 382 aa14.26□□□□□ -0.13
SHANK1-201ENST00000293441 CACNA1EQ15878 2313 aa14.26□□□□□ -0.13
SHANK1-201ENST00000293441 TRAV5A0A0B4J249 113 aa14.26□□□□□ -0.13
SHANK1-201ENST00000293441 C14orf144Q96I85 54 aa14.26□□□□□ -0.13
SHANK1-201ENST00000293441 EFNB3Q15768 340 aa14.25□□□□□ -0.13
SHANK1-201ENST00000293441 PGPEP1Q9NXJ5 209 aa14.25□□□□□ -0.13
SHANK1-201ENST00000293441 NEUROG3Q9Y4Z2 214 aa14.25□□□□□ -0.13
SHANK1-201ENST00000293441 PSPNO60542 156 aa14.25□□□□□ -0.13
SHANK1-201ENST00000293441 HEPN1Q6WQI6 88 aa14.25□□□□□ -0.13
SHANK1-201ENST00000293441 FBLN5Q9UBX5 448 aa14.25□□□□□ -0.13
SHANK1-201ENST00000293441 C19orf67A6NJJ6 358 aa14.25□□□□□ -0.13
SHANK1-201ENST00000293441 LILRA1O75019 489 aa14.25□□□□□ -0.13
SHANK1-201ENST00000293441 COL8A2P25067 703 aa14.25□□□□□ -0.13
SHANK1-201ENST00000293441 FXYD7P58549 80 aa14.25□□□□□ -0.13
SHANK1-201ENST00000293441 IGKV2-40A0A087WW87 121 aaPredicted RBP14.25□□□□□ -0.13
SHANK1-201ENST00000293441 IGKV2D-40P01614 121 aaPredicted RBP14.25□□□□□ -0.13
SHANK1-201ENST00000293441 RPL23P62829 140 aaKnown RBP14.25□□□□□ -0.13
SHANK1-201ENST00000293441 TCF23Q7RTU1 214 aa14.25□□□□□ -0.13
SHANK1-201ENST00000293441 LINC00469Q8N7U9 141 aa14.25□□□□□ -0.13
SHANK1-201ENST00000293441 FER1L5A0AVI2 2057 aa14.24□□□□□ -0.13
SHANK1-201ENST00000293441 MINOS1Q5TGZ0 78 aa14.24□□□□□ -0.13
SHANK1-201ENST00000293441 MSRB2Q9Y3D2 182 aa14.24□□□□□ -0.13
SHANK1-201ENST00000293441 MINOS1-NBL1R4GNA1 71 aa14.24□□□□□ -0.13
SHANK1-201ENST00000293441 GFI1Q99684 422 aa14.24□□□□□ -0.13
SHANK1-201ENST00000293441 TP53BP1Q12888 1972 aaPredicted RBP14.24□□□□□ -0.13
SHANK1-201ENST00000293441 FREM3P0C091 2139 aa14.24□□□□□ -0.13
SHANK1-201ENST00000293441 RBMY1BA6NDE4 496 aaKnown RBP14.24□□□□□ -0.13
SHANK1-201ENST00000293441 RBMY1EA6NEQ0 496 aaKnown RBP14.24□□□□□ -0.13
SHANK1-201ENST00000293441 RBMY1DP0C7P1 496 aaKnown RBP14.24□□□□□ -0.13
SHANK1-201ENST00000293441 RBMY1A1P0DJD3 496 aaKnown RBP14.24□□□□□ -0.13
SHANK1-201ENST00000293441 RBMY1CP0DJD4 496 aa14.24□□□□□ -0.13
SHANK1-201ENST00000293441 CCL20P78556 96 aa14.24□□□□□ -0.13
SHANK1-201ENST00000293441 PRR30Q53SZ7 412 aaPredicted RBP14.24□□□□□ -0.13
SHANK1-201ENST00000293441 TCF20Q9UGU0 1960 aaKnown RBP14.24□□□□□ -0.13
SHANK1-201ENST00000293441 MBD3L4A6NDZ8 208 aaPredicted RBP14.24□□□□□ -0.13
SHANK1-201ENST00000293441 MBD3L3A6NE82 208 aaPredicted RBP14.24□□□□□ -0.13
SHANK1-201ENST00000293441 MBD3L5A6NJ08 208 aaPredicted RBP14.24□□□□□ -0.13
SHANK1-201ENST00000293441 OVOL1O14753 267 aa14.24□□□□□ -0.13
SHANK1-201ENST00000293441 C1QTNF9P0C862 333 aa14.24□□□□□ -0.13
SHANK1-201ENST00000293441 DDTP30046 118 aa14.24□□□□□ -0.13
SHANK1-201ENST00000293441 MBD3L2Q8NHZ7 208 aaPredicted RBP14.24□□□□□ -0.13
SHANK1-201ENST00000293441 FNDC1Q4ZHG4 1894 aaPredicted RBP14.24□□□□□ -0.13
SHANK1-201ENST00000293441 FAM90A9PA6NNJ1 464 aa14.24□□□□□ -0.13
SHANK1-201ENST00000293441 GAS1P54826 345 aa14.23□□□□□ -0.13
SHANK1-201ENST00000293441 SP5Q6BEB4 398 aaPredicted RBP14.23□□□□□ -0.13
SHANK1-201ENST00000293441 APOMO95445 188 aa14.23□□□□□ -0.13
SHANK1-201ENST00000293441 NUDT11Q96G61 164 aa14.23□□□□□ -0.13
SHANK1-201ENST00000293441 BPESC1Q9GZL8 116 aa14.23□□□□□ -0.13
SHANK1-201ENST00000293441 NDPQ00604 133 aa14.23□□□□□ -0.13
SHANK1-201ENST00000293441 Q6ZS92 163 aa14.23□□□□□ -0.13
SHANK1-201ENST00000293441 TTC9CQ8N5M4 171 aa14.23□□□□□ -0.13
SHANK1-201ENST00000293441 KLHL30-AS1Q8NEE0 82 aa14.23□□□□□ -0.13
SHANK1-201ENST00000293441 GAFA1Q96PS6 74 aa14.23□□□□□ -0.13
SHANK1-201ENST00000293441 CHCHD5Q9BSY4 110 aa14.23□□□□□ -0.13
SHANK1-201ENST00000293441 DTX2Q86UW9 622 aa14.23□□□□□ -0.13
SHANK1-201ENST00000293441 BMPERQ8N8U9 685 aa14.23□□□□□ -0.13
SHANK1-201ENST00000293441 LINC01356Q8N9X3 169 aa14.23□□□□□ -0.13
SHANK1-201ENST00000293441 PARD6GQ9BYG4 376 aaPredicted RBP14.23□□□□□ -0.13
SHANK1-201ENST00000293441 IGHV3-73A0A0B4J1V6 119 aa14.22□□□□□ -0.13
SHANK1-201ENST00000293441 BTCP35070 178 aa14.22□□□□□ -0.13
SHANK1-201ENST00000293441 LCNL1Q6ZST4 164 aa14.22□□□□□ -0.13
SHANK1-201ENST00000293441 ZNF329Q86UD4 541 aa14.22□□□□□ -0.13
SHANK1-201ENST00000293441 C11orf68Q9H3H3 251 aaKnown RBP14.22□□□□□ -0.13
SHANK1-201ENST00000293441 NPIPB5A8MRT5 1133 aa14.22□□□□□ -0.13
SHANK1-201ENST00000293441 CTAG1AP78358 180 aa14.22□□□□□ -0.13
SHANK1-201ENST00000293441 LYPD2Q6UXB3 125 aa14.22□□□□□ -0.13
SHANK1-201ENST00000293441 SLC25A48Q6ZT89 311 aaKnown RBP14.22□□□□□ -0.13
SHANK1-201ENST00000293441 SSC4DQ8WTU2 575 aa14.22□□□□□ -0.13
SHANK1-201ENST00000293441 THSD7BQ9C0I4 1608 aa14.22□□□□□ -0.13
SHANK1-201ENST00000293441 F8VVB4 439 aa14.22□□□□□ -0.13
SHANK1-201ENST00000293441 F8VWA3 439 aa14.22□□□□□ -0.13
SHANK1-201ENST00000293441 PMS2P5A8MQ11 134 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms