RNA–Protein interactions for RNA: ENST00000262795.5

SHANK3-201, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS P5 TSL 5 BASIC

Gene SHANK3, Length 7,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-201ENST00000262795 FGFBP3Q8TAT2 258 aa13.15□□□□□ -0.3
SHANK3-201ENST00000262795 PLPPR1Q8TBJ4 325 aa13.15□□□□□ -0.3
SHANK3-201ENST00000262795 SIGMAR1Q99720 223 aa13.15□□□□□ -0.3
SHANK3-201ENST00000262795 TRAV8-4A0A0B4J246 113 aa13.15□□□□□ -0.3
SHANK3-201ENST00000262795 NRGNQ92686 78 aa13.15□□□□□ -0.3
SHANK3-201ENST00000262795 LRRC37AA6NMS7 1700 aa13.15□□□□□ -0.3
SHANK3-201ENST00000262795 DOCK8Q8NF50 2099 aa13.15□□□□□ -0.3
SHANK3-201ENST00000262795 RND3P61587 244 aa13.15□□□□□ -0.3
SHANK3-201ENST00000262795 LIMS1P48059 325 aa13.15□□□□□ -0.3
SHANK3-201ENST00000262795 HIST1H4AP62805 103 aaKnown RBP13.15□□□□□ -0.3
SHANK3-201ENST00000262795 C2orf68Q2NKX9 166 aa13.15□□□□□ -0.3
SHANK3-201ENST00000262795 LYPD2Q6UXB3 125 aa13.15□□□□□ -0.3
SHANK3-201ENST00000262795 DLX4Q92988 240 aaPredicted RBP13.15□□□□□ -0.3
SHANK3-201ENST00000262795 XCL2Q9UBD3 114 aa13.14□□□□□ -0.31
SHANK3-201ENST00000262795 LINC00477Q96M19 166 aa13.14□□□□□ -0.31
SHANK3-201ENST00000262795 IMMP2LQ96T52 175 aa13.14□□□□□ -0.31
SHANK3-201ENST00000262795 TMEM30BQ3MIR4 351 aa13.14□□□□□ -0.31
SHANK3-201ENST00000262795 VCX2Q9H322 139 aa13.14□□□□□ -0.31
SHANK3-201ENST00000262795 SIPA1L3O60292 1781 aaPredicted RBP13.14□□□□□ -0.31
SHANK3-201ENST00000262795 IGKV2-40A0A087WW87 121 aaPredicted RBP13.14□□□□□ -0.31
SHANK3-201ENST00000262795 TMEM50AO95807 157 aa13.14□□□□□ -0.31
SHANK3-201ENST00000262795 IGKV2D-40P01614 121 aaPredicted RBP13.14□□□□□ -0.31
SHANK3-201ENST00000262795 IGLV3-19P01714 112 aa13.14□□□□□ -0.31
SHANK3-201ENST00000262795 GCHFRP30047 84 aa13.14□□□□□ -0.31
SHANK3-201ENST00000262795 PAPPA-AS1Q5QFB9 102 aa13.14□□□□□ -0.31
SHANK3-201ENST00000262795 RPRMLQ8N4K4 120 aa13.14□□□□□ -0.31
SHANK3-201ENST00000262795 J3QW42 95 aa13.14□□□□□ -0.31
SHANK3-201ENST00000262795 PRR31Q5SQ13 230 aa13.14□□□□□ -0.31
SHANK3-201ENST00000262795 SDHCQ99643 169 aaPredicted RBP13.14□□□□□ -0.31
SHANK3-201ENST00000262795 ST20Q9HBF5 79 aa13.14□□□□□ -0.31
SHANK3-201ENST00000262795 HEATR1Q9H583 2144 aaKnown RBP13.14□□□□□ -0.31
SHANK3-201ENST00000262795 H3BUT2 72 aa13.14□□□□□ -0.31
SHANK3-201ENST00000262795 MIR17HGQ75NE6 70 aa13.13□□□□□ -0.31
SHANK3-201ENST00000262795 PQLC2LA1A4F0 135 aa13.13□□□□□ -0.31
SHANK3-201ENST00000262795 TBX6O95947 436 aaPredicted RBP13.13□□□□□ -0.31
SHANK3-201ENST00000262795 IGHMP01871 453 aa13.13□□□□□ -0.31
SHANK3-201ENST00000262795 MRPL32Q9BYC8 188 aaKnown RBP13.13□□□□□ -0.31
SHANK3-201ENST00000262795 TMEM178BH3BS89 294 aa13.13□□□□□ -0.31
SHANK3-201ENST00000262795 WISP1O95388 367 aa13.13□□□□□ -0.31
SHANK3-201ENST00000262795 FER1L6-AS1Q8NA97 138 aa13.13□□□□□ -0.31
SHANK3-201ENST00000262795 LINC00614P0C842 121 aa13.13□□□□□ -0.31
SHANK3-201ENST00000262795 HOXA5P20719 270 aa13.13□□□□□ -0.31
SHANK3-201ENST00000262795 COL4A6Q14031 1691 aa13.13□□□□□ -0.31
SHANK3-201ENST00000262795 TRGV11A0A075B6L2 103 aa13.12□□□□□ -0.31
SHANK3-201ENST00000262795 ALPK2Q86TB3 2170 aa13.12□□□□□ -0.31
SHANK3-201ENST00000262795 IGHV3-16A0A0C4DH30 117 aa13.12□□□□□ -0.31
SHANK3-201ENST00000262795 RAMP3O60896 148 aa13.12□□□□□ -0.31
SHANK3-201ENST00000262795 CBLN1P23435 193 aa13.12□□□□□ -0.31
SHANK3-201ENST00000262795 P2RY4P51582 365 aa13.12□□□□□ -0.31
SHANK3-201ENST00000262795 TPTE2P1Q5T6R2 138 aa13.12□□□□□ -0.31
SHANK3-201ENST00000262795 ZNF474Q6S9Z5 364 aaPredicted RBP13.12□□□□□ -0.31
SHANK3-201ENST00000262795 KCNS1Q96KK3 526 aa13.12□□□□□ -0.31
SHANK3-201ENST00000262795 MPTX1A8MV57 137 aa13.12□□□□□ -0.31
SHANK3-201ENST00000262795 E7EQL1 145 aa13.12□□□□□ -0.31
SHANK3-201ENST00000262795 RNF125Q96EQ8 232 aa13.12□□□□□ -0.31
SHANK3-201ENST00000262795 C1QTNF5Q9BXJ0 243 aa13.12□□□□□ -0.31
SHANK3-201ENST00000262795 MRPL52Q86TS9 123 aaKnown RBP13.12□□□□□ -0.31
SHANK3-201ENST00000262795 A0A1B0GW15 77 aa13.11□□□□□ -0.31
SHANK3-201ENST00000262795 SSBP4Q9BWG4 385 aaPredicted RBP13.11□□□□□ -0.31
SHANK3-201ENST00000262795 FAM90A10PA6NDY2 464 aa13.11□□□□□ -0.31
SHANK3-201ENST00000262795 FAM90A18PA6NE21 464 aa13.11□□□□□ -0.31
SHANK3-201ENST00000262795 FAM90A16PA6NEW6 464 aa13.11□□□□□ -0.31
SHANK3-201ENST00000262795 FAM90A20PA6NIJ5 464 aa13.11□□□□□ -0.31
SHANK3-201ENST00000262795 FAM90A8PA6NJQ4 464 aa13.11□□□□□ -0.31
SHANK3-201ENST00000262795 FAM90A7PA6NKC0 464 aa13.11□□□□□ -0.31
SHANK3-201ENST00000262795 FAM90A22PA8MWA6 464 aa13.11□□□□□ -0.31
SHANK3-201ENST00000262795 FAM90A12PA8MX19 464 aa13.11□□□□□ -0.31
SHANK3-201ENST00000262795 FAM90A5PA8MXJ8 464 aa13.11□□□□□ -0.31
SHANK3-201ENST00000262795 FAM90A23PA8MXZ1 464 aa13.11□□□□□ -0.31
SHANK3-201ENST00000262795 FAM90A15PP0C7V4 464 aa13.11□□□□□ -0.31
SHANK3-201ENST00000262795 FAM90A13PP0C7W8 464 aa13.11□□□□□ -0.31
SHANK3-201ENST00000262795 FAM90A14PP0C7W9 464 aa13.11□□□□□ -0.31
SHANK3-201ENST00000262795 FAM90A24PP0C7X0 464 aa13.11□□□□□ -0.31
SHANK3-201ENST00000262795 HBBP68871 147 aa13.11□□□□□ -0.31
SHANK3-201ENST00000262795 AGAP20933 346 aa13.11□□□□□ -0.31
SHANK3-201ENST00000262795 HOXD3P31249 432 aaPredicted RBP13.11□□□□□ -0.31
SHANK3-201ENST00000262795 ZNF562Q6V9R5 426 aa13.11□□□□□ -0.31
SHANK3-201ENST00000262795 CTHRC1Q96CG8 243 aa13.11□□□□□ -0.31
SHANK3-201ENST00000262795 TMEM250H0YL14 139 aa13.11□□□□□ -0.31
SHANK3-201ENST00000262795 PAQR4Q8N4S7 273 aaPredicted RBP13.11□□□□□ -0.31
SHANK3-201ENST00000262795 ASCL2Q99929 193 aa13.11□□□□□ -0.31
SHANK3-201ENST00000262795 NRXN2Q9P2S2 1712 aa13.11□□□□□ -0.31
SHANK3-201ENST00000262795 C10orf55Q5SWW7 151 aa13.11□□□□□ -0.31
SHANK3-201ENST00000262795 AKAP6Q13023 2319 aa13.11□□□□□ -0.31
SHANK3-201ENST00000262795 NDUFS6O75380 124 aaKnown RBP13.11□□□□□ -0.31
SHANK3-201ENST00000262795 DEFB131AP59861 70 aa13.11□□□□□ -0.31
SHANK3-201ENST00000262795 IFI27P40305 119 aaPredicted RBP13.1□□□□□ -0.31
SHANK3-201ENST00000262795 SERF2P84101 59 aa13.1□□□□□ -0.31
SHANK3-201ENST00000262795 MORN2Q502X0 79 aa13.1□□□□□ -0.31
SHANK3-201ENST00000262795 REG4Q9BYZ8 158 aa13.1□□□□□ -0.31
SHANK3-201ENST00000262795 DKK4Q9UBT3 224 aa13.1□□□□□ -0.31
SHANK3-201ENST00000262795 FSTP19883 344 aa13.1□□□□□ -0.31
SHANK3-201ENST00000262795 SPSB3Q6PJ21 355 aa13.1□□□□□ -0.31
SHANK3-201ENST00000262795 NR2C2APQ86WQ0 139 aa13.1□□□□□ -0.31
SHANK3-201ENST00000262795 SCO2A0A1W2PP80 73 aa13.1□□□□□ -0.31
SHANK3-201ENST00000262795 CMC4P56277 68 aaPredicted RBP13.1□□□□□ -0.31
SHANK3-201ENST00000262795 MEF2BQ02080 365 aaPredicted RBP13.1□□□□□ -0.31
SHANK3-201ENST00000262795 LCN12Q6JVE5 192 aa13.1□□□□□ -0.31
SHANK3-201ENST00000262795 JPT2Q9H910 190 aa13.1□□□□□ -0.31
SHANK3-201ENST00000262795 FAM90A1Q86YD7 464 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 122.8 ms