RNA–Protein interactions for RNA: ENST00000262215.7

ARFGEF1-201, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARFGEF1, Length 7,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-201ENST00000262215 TMEM170AQ8WVE7 144 aa10.36□□□□□ -0.75
ARFGEF1-201ENST00000262215 ZNF138P52744 262 aa10.36□□□□□ -0.75
ARFGEF1-201ENST00000262215 CCL20P78556 96 aa10.36□□□□□ -0.75
ARFGEF1-201ENST00000262215 GUSBP1Q15486 140 aa10.36□□□□□ -0.75
ARFGEF1-201ENST00000262215 TIMM23O14925 209 aa10.36□□□□□ -0.75
ARFGEF1-201ENST00000262215 PAX8Q06710 450 aa10.36□□□□□ -0.75
ARFGEF1-201ENST00000262215 LY6DQ14210 128 aa10.36□□□□□ -0.75
ARFGEF1-201ENST00000262215 LCN12Q6JVE5 192 aa10.36□□□□□ -0.75
ARFGEF1-201ENST00000262215 SLC25A39Q9BZJ4 359 aaPredicted RBP10.36□□□□□ -0.75
ARFGEF1-201ENST00000262215 DDX60LQ5H9U9 1706 aaKnown RBP10.35□□□□□ -0.75
ARFGEF1-201ENST00000262215 DEFB130BP0DP73 79 aa10.35□□□□□ -0.75
ARFGEF1-201ENST00000262215 DEFB130AP0DP74 79 aa10.35□□□□□ -0.75
ARFGEF1-201ENST00000262215 RIPPLY2Q5TAB7 128 aa10.35□□□□□ -0.75
ARFGEF1-201ENST00000262215 PMS2P5A8MQ11 134 aa10.35□□□□□ -0.75
ARFGEF1-201ENST00000262215 C10orf55Q5SWW7 151 aa10.35□□□□□ -0.75
ARFGEF1-201ENST00000262215 NR2C2APQ86WQ0 139 aa10.35□□□□□ -0.75
ARFGEF1-201ENST00000262215 METRNQ9UJH8 293 aa10.35□□□□□ -0.75
ARFGEF1-201ENST00000262215 FAM186AA6NE01 2351 aa10.35□□□□□ -0.75
ARFGEF1-201ENST00000262215 A0A087WWL8 130 aa10.35□□□□□ -0.75
ARFGEF1-201ENST00000262215 ANXA2RQ3ZCQ2 193 aa10.35□□□□□ -0.75
ARFGEF1-201ENST00000262215 Q8TAT8 98 aa10.35□□□□□ -0.75
ARFGEF1-201ENST00000262215 ZNF319Q9P2F9 582 aa10.35□□□□□ -0.75
ARFGEF1-201ENST00000262215 TRGV11A0A075B6L2 103 aa10.35□□□□□ -0.75
ARFGEF1-201ENST00000262215 DUSP14O95147 198 aaKnown RBP10.35□□□□□ -0.75
ARFGEF1-201ENST00000262215 KLRD1Q13241 179 aa10.35□□□□□ -0.75
ARFGEF1-201ENST00000262215 DDX60Q8IY21 1712 aaKnown RBP10.35□□□□□ -0.75
ARFGEF1-201ENST00000262215 UPK2O00526 184 aa10.35□□□□□ -0.75
ARFGEF1-201ENST00000262215 COX5BP10606 129 aa10.35□□□□□ -0.75
ARFGEF1-201ENST00000262215 LINC00477Q96M19 166 aa10.35□□□□□ -0.75
ARFGEF1-201ENST00000262215 TRAV12-1A0A0B4J245 112 aa10.34□□□□□ -0.75
ARFGEF1-201ENST00000262215 FCN3O75636 299 aa10.34□□□□□ -0.75
ARFGEF1-201ENST00000262215 OR9G9P0C7N8 305 aa10.34□□□□□ -0.75
ARFGEF1-201ENST00000262215 SPATA31B1PQ5VZV4 182 aa10.34□□□□□ -0.75
ARFGEF1-201ENST00000262215 SCN9AQ15858 1988 aa10.34□□□□□ -0.75
ARFGEF1-201ENST00000262215 F8VVB4 439 aa10.34□□□□□ -0.75
ARFGEF1-201ENST00000262215 F8VWA3 439 aa10.34□□□□□ -0.75
ARFGEF1-201ENST00000262215 TM4SF5O14894 197 aa10.34□□□□□ -0.75
ARFGEF1-201ENST00000262215 ECM29Q5VYK3 1845 aa10.34□□□□□ -0.75
ARFGEF1-201ENST00000262215 TMEM238C9JI98 176 aa10.34□□□□□ -0.75
ARFGEF1-201ENST00000262215 NEU4Q8WWR8 484 aaPredicted RBP10.34□□□□□ -0.75
ARFGEF1-201ENST00000262215 HIST1H2BLQ99880 126 aa10.34□□□□□ -0.75
ARFGEF1-201ENST00000262215 TRAV25A0A0B4J276 109 aa10.34□□□□□ -0.75
ARFGEF1-201ENST00000262215 MLNRO43193 412 aa10.34□□□□□ -0.75
ARFGEF1-201ENST00000262215 BMPERQ8N8U9 685 aa10.34□□□□□ -0.75
ARFGEF1-201ENST00000262215 HSD52Q0P140 79 aa10.34□□□□□ -0.75
ARFGEF1-201ENST00000262215 SLC50A1Q9BRV3 221 aa10.34□□□□□ -0.75
ARFGEF1-201ENST00000262215 SCN11AQ9UI33 1791 aa10.33□□□□□ -0.76
ARFGEF1-201ENST00000262215 C17orf100A8MU93 164 aa10.33□□□□□ -0.76
ARFGEF1-201ENST00000262215 DLEU1O43261 78 aa10.33□□□□□ -0.76
ARFGEF1-201ENST00000262215 TEX43Q6ZNM6 134 aa10.33□□□□□ -0.76
ARFGEF1-201ENST00000262215 TOPAZ1Q8N9V7 1692 aa10.33□□□□□ -0.76
ARFGEF1-201ENST00000262215 INTS1Q8N201 2190 aaKnown RBP10.33□□□□□ -0.76
ARFGEF1-201ENST00000262215 SRRM4A7MD48 611 aaKnown RBP10.33□□□□□ -0.76
ARFGEF1-201ENST00000262215 TMEM126AQ9H061 195 aa10.33□□□□□ -0.76
ARFGEF1-201ENST00000262215 RPUSD1Q9UJJ7 312 aaKnown RBP10.33□□□□□ -0.76
ARFGEF1-201ENST00000262215 RGPD1P0DJD0 1748 aa10.33□□□□□ -0.76
ARFGEF1-201ENST00000262215 C9JAW5 83 aa10.33□□□□□ -0.76
ARFGEF1-201ENST00000262215 KLF17Q5JT82 389 aaPredicted RBP10.33□□□□□ -0.76
ARFGEF1-201ENST00000262215 TMEM144Q7Z5S9 345 aa10.33□□□□□ -0.76
ARFGEF1-201ENST00000262215 CEP250Q9BV73 2442 aa10.33□□□□□ -0.76
ARFGEF1-201ENST00000262215 A0A087WV48 116 aa10.33□□□□□ -0.76
ARFGEF1-201ENST00000262215 UCP1P25874 307 aa10.33□□□□□ -0.76
ARFGEF1-201ENST00000262215 TIMP3P35625 211 aa10.33□□□□□ -0.76
ARFGEF1-201ENST00000262215 EFNB3Q15768 340 aa10.33□□□□□ -0.76
ARFGEF1-201ENST00000262215 C14orf178Q8N769 122 aaPredicted RBP10.33□□□□□ -0.76
ARFGEF1-201ENST00000262215 C9orf106Q8NAJ2 232 aa10.33□□□□□ -0.76
ARFGEF1-201ENST00000262215 LYZL1Q6UWQ5 148 aa10.33□□□□□ -0.76
ARFGEF1-201ENST00000262215 ZNF329Q86UD4 541 aa10.33□□□□□ -0.76
ARFGEF1-201ENST00000262215 CACNG8Q8WXS5 425 aa10.33□□□□□ -0.76
ARFGEF1-201ENST00000262215 ABCA1O95477 2261 aa10.33□□□□□ -0.76
ARFGEF1-201ENST00000262215 COLCA2A8K830 154 aa10.33□□□□□ -0.76
ARFGEF1-201ENST00000262215 SPINK8P0C7L1 97 aa10.33□□□□□ -0.76
ARFGEF1-201ENST00000262215 BRD3OSQ6XYD6 125 aa10.33□□□□□ -0.76
ARFGEF1-201ENST00000262215 RS1O15537 224 aa10.32□□□□□ -0.76
ARFGEF1-201ENST00000262215 CGB3P0DN86 165 aa10.32□□□□□ -0.76
ARFGEF1-201ENST00000262215 LINC00312Q9Y6C7 94 aa10.32□□□□□ -0.76
ARFGEF1-201ENST00000262215 CLPSP04118 112 aa10.32□□□□□ -0.76
ARFGEF1-201ENST00000262215 HOXD3P31249 432 aaPredicted RBP10.32□□□□□ -0.76
ARFGEF1-201ENST00000262215 RALGAPA1Q6GYQ0 2036 aa10.32□□□□□ -0.76
ARFGEF1-201ENST00000262215 SPTBN1Q01082 2364 aaKnown RBP10.32□□□□□ -0.76
ARFGEF1-201ENST00000262215 ZDBF2Q9HCK1 2354 aa10.32□□□□□ -0.76
ARFGEF1-201ENST00000262215 PSG1P11464 419 aa10.32□□□□□ -0.76
ARFGEF1-201ENST00000262215 TMEM30BQ3MIR4 351 aa10.32□□□□□ -0.76
ARFGEF1-201ENST00000262215 CXCL1P09341 107 aa10.32□□□□□ -0.76
ARFGEF1-201ENST00000262215 CGB7P0DN87 165 aa10.32□□□□□ -0.76
ARFGEF1-201ENST00000262215 ERCC8Q13216 396 aa10.32□□□□□ -0.76
ARFGEF1-201ENST00000262215 RBMY1FQ15415 496 aaKnown RBP10.32□□□□□ -0.76
ARFGEF1-201ENST00000262215 HIST3H2BBQ8N257 126 aa10.32□□□□□ -0.76
ARFGEF1-201ENST00000262215 SNHG12Q9BXW3 62 aa10.32□□□□□ -0.76
ARFGEF1-201ENST00000262215 CSTL1Q9H114 145 aa10.32□□□□□ -0.76
ARFGEF1-201ENST00000262215 LEPROTO15243 131 aa10.31□□□□□ -0.76
ARFGEF1-201ENST00000262215 ATP5IP56385 69 aaPredicted RBP10.31□□□□□ -0.76
ARFGEF1-201ENST00000262215 PSG3Q16557 428 aa10.31□□□□□ -0.76
ARFGEF1-201ENST00000262215 C15orf61A6NNL5 157 aa10.31□□□□□ -0.76
ARFGEF1-201ENST00000262215 RSPO3Q9BXY4 272 aaPredicted RBP10.31□□□□□ -0.76
ARFGEF1-201ENST00000262215 CACNA1IQ9P0X4 2223 aa10.31□□□□□ -0.76
ARFGEF1-201ENST00000262215 KNCNA6PVL3 124 aa10.31□□□□□ -0.76
ARFGEF1-201ENST00000262215 PRIMA1Q86XR5 153 aa10.31□□□□□ -0.76
ARFGEF1-201ENST00000262215 RFNGQ9Y644 331 aa10.31□□□□□ -0.76
ARFGEF1-201ENST00000262215 NDUFS5O43920 106 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms