RNA–Protein interactions for RNA: ENST00000199706.12

MRPL28-201, Transcript of mitochondrial ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL28, Length 1,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-201ENST00000199706 OR4D5Q8NGN0 318 aa13.07□□□□□ -0.32
MRPL28-201ENST00000199706 ZNF431Q8TF32 576 aaPredicted RBP13.07□□□□□ -0.32
MRPL28-201ENST00000199706 VSIRQ9H7M9 311 aa13.07□□□□□ -0.32
MRPL28-201ENST00000199706 TRAV6A0A075B6T7 132 aa13.06□□□□□ -0.32
MRPL28-201ENST00000199706 IFNA4P05014 189 aa13.06□□□□□ -0.32
MRPL28-201ENST00000199706 H2AFB2P0C5Z0 115 aa13.06□□□□□ -0.32
MRPL28-201ENST00000199706 OR10J1P30954 320 aa13.06□□□□□ -0.32
MRPL28-201ENST00000199706 NKX2-1P43699 371 aaPredicted RBP13.06□□□□□ -0.32
MRPL28-201ENST00000199706 MLANAQ16655 118 aa13.06□□□□□ -0.32
MRPL28-201ENST00000199706 C11orf87Q6NUJ2 197 aa13.06□□□□□ -0.32
MRPL28-201ENST00000199706 RHPN1-AS1Q9BWJ2 59 aa13.06□□□□□ -0.32
MRPL28-201ENST00000199706 TMEM231Q9H6L2 316 aa13.06□□□□□ -0.32
MRPL28-201ENST00000199706 MPTX1A8MV57 137 aa13.05□□□□□ -0.32
MRPL28-201ENST00000199706 IL5P05113 134 aa13.05□□□□□ -0.32
MRPL28-201ENST00000199706 OR52B4Q8NGK2 314 aa13.05□□□□□ -0.32
MRPL28-201ENST00000199706 ENKURQ8TC29 256 aa13.05□□□□□ -0.32
MRPL28-201ENST00000199706 IGHV3OR16-8A0A075B7F1 116 aa13.04□□□□□ -0.32
MRPL28-201ENST00000199706 A0A1W2PS18 150 aa13.04□□□□□ -0.32
MRPL28-201ENST00000199706 OR4C46A6NHA9 309 aa13.04□□□□□ -0.32
MRPL28-201ENST00000199706 PRSS46E5RG02 174 aa13.04□□□□□ -0.32
MRPL28-201ENST00000199706 CD7P09564 240 aa13.04□□□□□ -0.32
MRPL28-201ENST00000199706 IAPPP10997 89 aa13.04□□□□□ -0.32
MRPL28-201ENST00000199706 CRYBB3P26998 211 aa13.04□□□□□ -0.32
MRPL28-201ENST00000199706 TAS2R30P59541 319 aa13.04□□□□□ -0.32
MRPL28-201ENST00000199706 IAH1Q2TAA2 248 aaPredicted RBP13.04□□□□□ -0.32
MRPL28-201ENST00000199706 TIGITQ495A1 244 aa13.04□□□□□ -0.32
MRPL28-201ENST00000199706 FAM90A2PQ658T7 463 aa13.04□□□□□ -0.32
MRPL28-201ENST00000199706 LINC00322Q6ZN03 302 aaPredicted RBP13.04□□□□□ -0.32
MRPL28-201ENST00000199706 Q8WTZ3 238 aa13.04□□□□□ -0.32
MRPL28-201ENST00000199706 NPIPB3Q92617 1050 aa13.04□□□□□ -0.32
MRPL28-201ENST00000199706 SLC35E1Q96K37 410 aa13.04□□□□□ -0.32
MRPL28-201ENST00000199706 METTL26Q96S19 204 aa13.04□□□□□ -0.32
MRPL28-201ENST00000199706 RAB40CQ96S21 281 aa13.04□□□□□ -0.32
MRPL28-201ENST00000199706 TENM3Q9P273 2699 aa13.04□□□□□ -0.32
MRPL28-201ENST00000199706 TRAV2A0A0B4J234 112 aa13.03□□□□□ -0.32
MRPL28-201ENST00000199706 WRBO00258 174 aa13.03□□□□□ -0.32
MRPL28-201ENST00000199706 ZNF207O43670 478 aaKnown RBP13.03□□□□□ -0.32
MRPL28-201ENST00000199706 TOMM40O96008 361 aa13.03□□□□□ -0.32
MRPL28-201ENST00000199706 FABP1P07148 127 aa13.03□□□□□ -0.32
MRPL28-201ENST00000199706 NPPCP23582 126 aa13.03□□□□□ -0.32
MRPL28-201ENST00000199706 DEFA1P59665 94 aa13.03□□□□□ -0.32
MRPL28-201ENST00000199706 DEFA3P59666 94 aa13.03□□□□□ -0.32
MRPL28-201ENST00000199706 IFITM3Q01628 133 aa13.03□□□□□ -0.32
MRPL28-201ENST00000199706 GAMTQ14353 236 aa13.03□□□□□ -0.32
MRPL28-201ENST00000199706 SBSPONQ8IVN8 264 aa13.03□□□□□ -0.32
MRPL28-201ENST00000199706 ZBTB8BQ8NAP8 495 aaPredicted RBP13.03□□□□□ -0.32
MRPL28-201ENST00000199706 ACY3Q96HD9 319 aa13.03□□□□□ -0.32
MRPL28-201ENST00000199706 SMIM8Q96KF7 97 aa13.03□□□□□ -0.32
MRPL28-201ENST00000199706 RNF2Q99496 336 aa13.03□□□□□ -0.32
MRPL28-201ENST00000199706 TM2D3Q9BRN9 247 aa13.03□□□□□ -0.32
MRPL28-201ENST00000199706 MAGT1Q9H0U3 335 aa13.03□□□□□ -0.32
MRPL28-201ENST00000199706 STRAPQ9Y3F4 350 aaKnown RBP13.03□□□□□ -0.32
MRPL28-201ENST00000199706 OR11H12B2RN74 326 aa13.02□□□□□ -0.33
MRPL28-201ENST00000199706 C12orf45Q8N5I9 185 aaPredicted RBP13.02□□□□□ -0.33
MRPL28-201ENST00000199706 THAP8Q8NA92 274 aa13.02□□□□□ -0.33
MRPL28-201ENST00000199706 NARS2Q96I59 477 aaKnown RBP13.02□□□□□ -0.33
MRPL28-201ENST00000199706 TUBA4BQ9H853 241 aa13.02□□□□□ -0.33
MRPL28-201ENST00000199706 U3KQE9 123 aa13.02□□□□□ -0.33
MRPL28-201ENST00000199706 U3KQK5 164 aa13.02□□□□□ -0.33
MRPL28-201ENST00000199706 PRAF2O60831 178 aa13.01□□□□□ -0.33
MRPL28-201ENST00000199706 TSC22D2O75157 780 aa13.01□□□□□ -0.33
MRPL28-201ENST00000199706 RD3LP0DJH9 198 aa13.01□□□□□ -0.33
MRPL28-201ENST00000199706 NUP62P37198 522 aaPredicted RBP13.01□□□□□ -0.33
MRPL28-201ENST00000199706 CMC4P56277 68 aaPredicted RBP13.01□□□□□ -0.33
MRPL28-201ENST00000199706 POLR2GP62487 172 aaKnown RBP eCLIP13.01□□□□□ -0.33
MRPL28-201ENST00000199706 ST8SIA2Q92186 375 aa13.01□□□□□ -0.33
MRPL28-201ENST00000199706 SEC22CQ9BRL7 303 aa13.01□□□□□ -0.33
MRPL28-201ENST00000199706 HUWE1Q7Z6Z7 4374 aaKnown RBP13□□□□□ -0.33
MRPL28-201ENST00000199706 SNRPGP15A8MWD9 76 aa13□□□□□ -0.33
MRPL28-201ENST00000199706 FNDC10F2Z333 226 aa13□□□□□ -0.33
MRPL28-201ENST00000199706 SSSCA1O60232 199 aa13□□□□□ -0.33
MRPL28-201ENST00000199706 CFDP00746 253 aaPredicted RBP13□□□□□ -0.33
MRPL28-201ENST00000199706 SPANXN5Q5MJ07 72 aa13□□□□□ -0.33
MRPL28-201ENST00000199706 OR8G2PQ6IF36 304 aa13□□□□□ -0.33
MRPL28-201ENST00000199706 GRAMD2BQ96HH9 432 aa13□□□□□ -0.33
MRPL28-201ENST00000199706 TRGV9Q99603 122 aa13□□□□□ -0.33
MRPL28-201ENST00000199706 ZMAT4Q9H898 229 aa13□□□□□ -0.33
MRPL28-201ENST00000199706 GPN1Q9HCN4 374 aaPredicted RBP13□□□□□ -0.33
MRPL28-201ENST00000199706 RCL1Q9Y2P8 373 aaKnown RBP13□□□□□ -0.33
MRPL28-201ENST00000199706 NBEAL2Q6ZNJ1 2754 aa12.99□□□□□ -0.33
MRPL28-201ENST00000199706 IGKV1D-37A0A075B6S9 117 aa12.99□□□□□ -0.33
MRPL28-201ENST00000199706 ZFP92A6NM28 416 aa12.99□□□□□ -0.33
MRPL28-201ENST00000199706 HNRNPCP07910 306 aaKnown RBP eCLIP12.99□□□□□ -0.33
MRPL28-201ENST00000199706 PAFAH1B2P68402 229 aa12.99□□□□□ -0.33
MRPL28-201ENST00000199706 TMEM14EPQ6UXP3 125 aa12.99□□□□□ -0.33
MRPL28-201ENST00000199706 NRARPQ7Z6K4 114 aa12.99□□□□□ -0.33
MRPL28-201ENST00000199706 OR51G1Q8NGK1 321 aa12.99□□□□□ -0.33
MRPL28-201ENST00000199706 MARVELD1Q9BSK0 173 aa12.99□□□□□ -0.33
MRPL28-201ENST00000199706 SRD5A3Q9H8P0 318 aa12.99□□□□□ -0.33
MRPL28-201ENST00000199706 PSENENQ9NZ42 101 aa12.99□□□□□ -0.33
MRPL28-201ENST00000199706 MBPP02686 304 aaPredicted RBP12.98□□□□□ -0.33
MRPL28-201ENST00000199706 IL4P05112 153 aa12.98□□□□□ -0.33
MRPL28-201ENST00000199706 PSG1P11464 419 aa12.98□□□□□ -0.33
MRPL28-201ENST00000199706 EIF2B2P49770 351 aaKnown RBP12.98□□□□□ -0.33
MRPL28-201ENST00000199706 PAX9P55771 341 aa12.98□□□□□ -0.33
MRPL28-201ENST00000199706 HAGHQ16775 308 aa12.98□□□□□ -0.33
MRPL28-201ENST00000199706 ODF3L2Q3SX64 289 aa12.98□□□□□ -0.33
MRPL28-201ENST00000199706 TCF24Q7RTU0 167 aa12.98□□□□□ -0.33
MRPL28-201ENST00000199706 DEFB125Q8N687 156 aa12.98□□□□□ -0.33
MRPL28-201ENST00000199706 RNF125Q96EQ8 232 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms