RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 MBD3L3A6NE82 208 aaPredicted RBP11.86□□□□□ -0.51
SCARB2-221ENST00000640341 MBD3L5A6NJ08 208 aaPredicted RBP11.86□□□□□ -0.51
SCARB2-221ENST00000640341 SLC25A17O43808 307 aa11.86□□□□□ -0.51
SCARB2-221ENST00000640341 RNASE2P10153 161 aaKnown RBP11.86□□□□□ -0.51
SCARB2-221ENST00000640341 MBD3L2Q8NHZ7 208 aaPredicted RBP11.86□□□□□ -0.51
SCARB2-221ENST00000640341 PPIAL4AQ9Y536 164 aa11.86□□□□□ -0.51
SCARB2-221ENST00000640341 TIMM8BQ9Y5J9 83 aaPredicted RBP11.86□□□□□ -0.51
SCARB2-221ENST00000640341 CACNA1BQ00975 2339 aa11.86□□□□□ -0.51
SCARB2-221ENST00000640341 SVEP1Q4LDE5 3571 aa11.86□□□□□ -0.51
SCARB2-221ENST00000640341 TLN1Q9Y490 2541 aaKnown RBP11.86□□□□□ -0.51
SCARB2-221ENST00000640341 DIRC3C9JPN6 131 aa11.86□□□□□ -0.51
SCARB2-221ENST00000640341 PAX1P15863 534 aa11.86□□□□□ -0.51
SCARB2-221ENST00000640341 CFHR2P36980 270 aa11.86□□□□□ -0.51
SCARB2-221ENST00000640341 CR1LQ2VPA4 569 aa11.86□□□□□ -0.51
SCARB2-221ENST00000640341 SLC25A33Q9BSK2 321 aa11.86□□□□□ -0.51
SCARB2-221ENST00000640341 SAP30LQ9HAJ7 183 aa11.86□□□□□ -0.51
SCARB2-221ENST00000640341 ZNF586Q9NXT0 402 aa11.86□□□□□ -0.51
SCARB2-221ENST00000640341 LRBAP50851 2863 aa11.86□□□□□ -0.51
SCARB2-221ENST00000640341 C9JCJ5 164 aa11.86□□□□□ -0.51
SCARB2-221ENST00000640341 USF1P22415 310 aaPredicted RBP11.86□□□□□ -0.51
SCARB2-221ENST00000640341 TFPI2P48307 235 aa11.86□□□□□ -0.51
SCARB2-221ENST00000640341 MFAP2P55001 183 aa11.86□□□□□ -0.51
SCARB2-221ENST00000640341 C21orf62-AS1Q17RA5 79 aa11.86□□□□□ -0.51
SCARB2-221ENST00000640341 TMEM183BQ1AE95 376 aa11.86□□□□□ -0.51
SCARB2-221ENST00000640341 TPTE2P1Q5T6R2 138 aa11.86□□□□□ -0.51
SCARB2-221ENST00000640341 ZNF788Q6ZQV5 615 aa11.86□□□□□ -0.51
SCARB2-221ENST00000640341 SLC25A48Q6ZT89 311 aaKnown RBP11.86□□□□□ -0.51
SCARB2-221ENST00000640341 ZNF439Q8NDP4 499 aa11.86□□□□□ -0.51
SCARB2-221ENST00000640341 ZNF331Q9NQX6 463 aaPredicted RBP11.86□□□□□ -0.51
SCARB2-221ENST00000640341 TPSG1Q9NRR2 321 aa11.86□□□□□ -0.51
SCARB2-221ENST00000640341 MALRD1Q5VYJ5 2156 aa11.86□□□□□ -0.51
SCARB2-221ENST00000640341 CHD8Q9HCK8 2581 aa11.86□□□□□ -0.51
SCARB2-221ENST00000640341 BRS3P32247 399 aa11.85□□□□□ -0.51
SCARB2-221ENST00000640341 PAFAH1B2P68402 229 aa11.85□□□□□ -0.51
SCARB2-221ENST00000640341 CD69Q07108 199 aa11.85□□□□□ -0.51
SCARB2-221ENST00000640341 LEMD1Q68G75 181 aa11.85□□□□□ -0.51
SCARB2-221ENST00000640341 DNAJC4Q9NNZ3 241 aa11.85□□□□□ -0.51
SCARB2-221ENST00000640341 AMMECR1Q9Y4X0 333 aaPredicted RBP11.85□□□□□ -0.51
SCARB2-221ENST00000640341 LBHQ53QV2 105 aaPredicted RBP11.85□□□□□ -0.51
SCARB2-221ENST00000640341 OR1B1Q8NGR6 318 aa11.85□□□□□ -0.51
SCARB2-221ENST00000640341 C11orf52Q96A22 123 aa11.85□□□□□ -0.51
SCARB2-221ENST00000640341 ZZEF1O43149 2961 aa11.85□□□□□ -0.51
SCARB2-221ENST00000640341 NKX6-3A6NJ46 265 aa11.85□□□□□ -0.51
SCARB2-221ENST00000640341 RPL19P84098 196 aaKnown RBP11.85□□□□□ -0.51
SCARB2-221ENST00000640341 C10orf113Q5VZT2 155 aa11.84□□□□□ -0.51
SCARB2-221ENST00000640341 LYPD2Q6UXB3 125 aa11.84□□□□□ -0.51
SCARB2-221ENST00000640341 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.84□□□□□ -0.51
SCARB2-221ENST00000640341 OR1L8Q8NGR8 309 aa11.84□□□□□ -0.51
SCARB2-221ENST00000640341 ZNF714Q96N38 554 aa11.84□□□□□ -0.51
SCARB2-221ENST00000640341 PAXXQ9BUH6 204 aa11.84□□□□□ -0.51
SCARB2-221ENST00000640341 FNDC4Q9H6D8 234 aaPredicted RBP11.84□□□□□ -0.51
SCARB2-221ENST00000640341 NRN1Q9NPD7 142 aa11.84□□□□□ -0.51
SCARB2-221ENST00000640341 MRPL36Q9P0J6 103 aaKnown RBP11.84□□□□□ -0.51
SCARB2-221ENST00000640341 IGLV3-9A0A075B6K5 115 aa11.84□□□□□ -0.51
SCARB2-221ENST00000640341 CD24P25063 80 aa11.84□□□□□ -0.51
SCARB2-221ENST00000640341 SELENOTP62341 195 aa11.84□□□□□ -0.51
SCARB2-221ENST00000640341 CX3CL1P78423 397 aa11.84□□□□□ -0.51
SCARB2-221ENST00000640341 WT1-ASQ06250 92 aa11.84□□□□□ -0.51
SCARB2-221ENST00000640341 C1orf185Q5T7R7 199 aa11.84□□□□□ -0.51
SCARB2-221ENST00000640341 GSX1Q9H4S2 264 aaPredicted RBP11.84□□□□□ -0.51
SCARB2-221ENST00000640341 WNK2Q9Y3S1 2297 aa11.84□□□□□ -0.51
SCARB2-221ENST00000640341 IGFL2Q6UWQ7 119 aa11.83□□□□□ -0.51
SCARB2-221ENST00000640341 NCOR2Q9Y618 2525 aa11.83□□□□□ -0.52
SCARB2-221ENST00000640341 ISLRO14498 428 aa11.83□□□□□ -0.52
SCARB2-221ENST00000640341 KLK10O43240 276 aa11.83□□□□□ -0.52
SCARB2-221ENST00000640341 APCSP02743 223 aa11.83□□□□□ -0.52
SCARB2-221ENST00000640341 SLAQ13239 276 aa11.83□□□□□ -0.52
SCARB2-221ENST00000640341 LCN12Q6JVE5 192 aa11.83□□□□□ -0.52
SCARB2-221ENST00000640341 TMEM136Q6ZRR5 245 aa11.83□□□□□ -0.52
SCARB2-221ENST00000640341 C1orf174Q8IYL3 243 aa11.83□□□□□ -0.52
SCARB2-221ENST00000640341 OR5B3Q8NH48 314 aa11.83□□□□□ -0.52
SCARB2-221ENST00000640341 RITA1Q96K30 269 aa11.83□□□□□ -0.52
SCARB2-221ENST00000640341 GAL3ST2Q9H3Q3 398 aa11.83□□□□□ -0.52
SCARB2-221ENST00000640341 CDC42EP3Q9UKI2 254 aa11.83□□□□□ -0.52
SCARB2-221ENST00000640341 KIR2DL5BA0A0G2JN68 375 aa11.83□□□□□ -0.52
SCARB2-221ENST00000640341 KIR2DL5BA0A0G2JPC4 375 aa11.83□□□□□ -0.52
SCARB2-221ENST00000640341 GPX1P07203 203 aa11.83□□□□□ -0.52
SCARB2-221ENST00000640341 TDGF1P3P51864 188 aa11.83□□□□□ -0.52
SCARB2-221ENST00000640341 TMEM200BQ69YZ2 307 aa11.83□□□□□ -0.52
SCARB2-221ENST00000640341 KIR2DL5AQ8N109 375 aa11.83□□□□□ -0.52
SCARB2-221ENST00000640341 SLC25A2Q9BXI2 301 aa11.83□□□□□ -0.52
SCARB2-221ENST00000640341 AKAP6Q13023 2319 aa11.82□□□□□ -0.52
SCARB2-221ENST00000640341 H0YJW9 148 aa11.82□□□□□ -0.52
SCARB2-221ENST00000640341 CORTO00230 105 aa11.82□□□□□ -0.52
SCARB2-221ENST00000640341 BMPR1BO00238 502 aa11.82□□□□□ -0.52
SCARB2-221ENST00000640341 C2orf83Q53S99 150 aa11.82□□□□□ -0.52
SCARB2-221ENST00000640341 TMEM108Q6UXF1 575 aa11.82□□□□□ -0.52
SCARB2-221ENST00000640341 LINC00305Q7Z4B0 112 aa11.82□□□□□ -0.52
SCARB2-221ENST00000640341 OR2D3Q8NGH3 330 aa11.82□□□□□ -0.52
SCARB2-221ENST00000640341 GNB1LQ9BYB4 327 aa11.82□□□□□ -0.52
SCARB2-221ENST00000640341 ZNF430Q9H8G1 570 aaPredicted RBP11.82□□□□□ -0.52
SCARB2-221ENST00000640341 SSUH2Q9Y2M2 353 aa11.82□□□□□ -0.52
SCARB2-221ENST00000640341 ZNF257Q9Y2Q1 563 aa11.82□□□□□ -0.52
SCARB2-221ENST00000640341 DLL1O00548 723 aa11.82□□□□□ -0.52
SCARB2-221ENST00000640341 TXN2Q99757 166 aa11.82□□□□□ -0.52
SCARB2-221ENST00000640341 ZNF292O60281 2723 aa11.82□□□□□ -0.52
SCARB2-221ENST00000640341 IGF2RP11717 2491 aa11.82□□□□□ -0.52
SCARB2-221ENST00000640341 A0A1W2PN81 502 aa11.82□□□□□ -0.52
SCARB2-221ENST00000640341 A0A1W2PS18 150 aa11.82□□□□□ -0.52
SCARB2-221ENST00000640341 SLC25A5P05141 298 aaKnown RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms