RNA–Protein interactions for RNA: ENST00000638573.1

COLCA2-206, Transcript of colorectal cancer associated 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COLCA2, Length 1,080 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-206ENST00000638573 CSN3P07498 182 aa12.47□□□□□ -0.41
COLCA2-206ENST00000638573 NHLRC4P0CG21 123 aaPredicted RBP12.47□□□□□ -0.41
COLCA2-206ENST00000638573 NPY1RP25929 384 aa12.47□□□□□ -0.41
COLCA2-206ENST00000638573 OPRK1P41145 380 aa12.47□□□□□ -0.41
COLCA2-206ENST00000638573 MFAP4P55083 255 aa12.47□□□□□ -0.41
COLCA2-206ENST00000638573 C2orf83Q53S99 150 aa12.47□□□□□ -0.41
COLCA2-206ENST00000638573 OR9G4Q8NGQ1 327 aa12.47□□□□□ -0.41
COLCA2-206ENST00000638573 BSCL2Q96G97 398 aaPredicted RBP12.47□□□□□ -0.41
COLCA2-206ENST00000638573 CIB3Q96Q77 187 aaPredicted RBP12.47□□□□□ -0.41
COLCA2-206ENST00000638573 PALMDQ9NP74 551 aa12.47□□□□□ -0.41
COLCA2-206ENST00000638573 PEMTQ9UBM1 199 aa12.47□□□□□ -0.41
COLCA2-206ENST00000638573 U3KQ87 197 aa12.47□□□□□ -0.41
COLCA2-206ENST00000638573 KMT2CQ8NEZ4 4911 aaKnown RBP12.46□□□□□ -0.41
COLCA2-206ENST00000638573 OR2T8A6NH00 312 aa12.46□□□□□ -0.41
COLCA2-206ENST00000638573 I3L2K1 104 aa12.46□□□□□ -0.41
COLCA2-206ENST00000638573 SCGB2A1O75556 95 aa12.46□□□□□ -0.41
COLCA2-206ENST00000638573 IAH1Q2TAA2 248 aaPredicted RBP12.46□□□□□ -0.41
COLCA2-206ENST00000638573 BSXQ3C1V8 233 aa12.46□□□□□ -0.41
COLCA2-206ENST00000638573 SPSB3Q6PJ21 355 aa12.46□□□□□ -0.41
COLCA2-206ENST00000638573 ZC4H2Q9NQZ6 224 aa12.46□□□□□ -0.41
COLCA2-206ENST00000638573 SORL1Q92673 2214 aa12.45□□□□□ -0.42
COLCA2-206ENST00000638573 MPTX1A8MV57 137 aa12.45□□□□□ -0.42
COLCA2-206ENST00000638573 FAM25EA8MYX2 175 aa12.45□□□□□ -0.42
COLCA2-206ENST00000638573 NUPL2O15504 423 aaKnown RBP12.45□□□□□ -0.42
COLCA2-206ENST00000638573 TGOLN2O43493 480 aa12.45□□□□□ -0.42
COLCA2-206ENST00000638573 SYNGR2O43760 224 aa12.45□□□□□ -0.42
COLCA2-206ENST00000638573 OR2C1O95371 312 aa12.45□□□□□ -0.42
COLCA2-206ENST00000638573 SCGB1D2O95969 90 aa12.45□□□□□ -0.42
COLCA2-206ENST00000638573 PTTG1O95997 202 aa12.45□□□□□ -0.42
COLCA2-206ENST00000638573 IGHV4-30-4P0DP06 118 aa12.45□□□□□ -0.42
COLCA2-206ENST00000638573 IAPPP10997 89 aa12.45□□□□□ -0.42
COLCA2-206ENST00000638573 NKX2-1P43699 371 aaPredicted RBP12.45□□□□□ -0.42
COLCA2-206ENST00000638573 NPBWR1P48145 328 aa12.45□□□□□ -0.42
COLCA2-206ENST00000638573 ATP5IP56385 69 aaPredicted RBP12.45□□□□□ -0.42
COLCA2-206ENST00000638573 RPP30P78346 268 aaKnown RBP12.45□□□□□ -0.42
COLCA2-206ENST00000638573 FAM106AQ4KMX7 169 aa12.45□□□□□ -0.42
COLCA2-206ENST00000638573 RNASEH2CQ8TDP1 164 aaKnown RBP12.45□□□□□ -0.42
COLCA2-206ENST00000638573 RCHY1Q96PM5 261 aa12.45□□□□□ -0.42
COLCA2-206ENST00000638573 TXN2Q99757 166 aa12.45□□□□□ -0.42
COLCA2-206ENST00000638573 MAGT1Q9H0U3 335 aa12.45□□□□□ -0.42
COLCA2-206ENST00000638573 GSKIPQ9P0R6 139 aa12.45□□□□□ -0.42
COLCA2-206ENST00000638573 TENM3Q9P273 2699 aa12.45□□□□□ -0.42
COLCA2-206ENST00000638573 C5orf51A6NDU8 294 aa12.44□□□□□ -0.42
COLCA2-206ENST00000638573 SNRPGP15A8MWD9 76 aa12.44□□□□□ -0.42
COLCA2-206ENST00000638573 CCSO14618 274 aa12.44□□□□□ -0.42
COLCA2-206ENST00000638573 GNG7O60262 68 aa12.44□□□□□ -0.42
COLCA2-206ENST00000638573 RAB11AP62491 216 aa12.44□□□□□ -0.42
COLCA2-206ENST00000638573 PVRIGQ6DKI7 326 aa12.44□□□□□ -0.42
COLCA2-206ENST00000638573 ETFRF1Q6IPR1 90 aa12.44□□□□□ -0.42
COLCA2-206ENST00000638573 OR4D5Q8NGN0 318 aa12.44□□□□□ -0.42
COLCA2-206ENST00000638573 MARVELD1Q9BSK0 173 aa12.44□□□□□ -0.42
COLCA2-206ENST00000638573 PAIP2BQ9ULR5 123 aaKnown RBP12.44□□□□□ -0.42
COLCA2-206ENST00000638573 ZNF320A2RRD8 509 aa12.43□□□□□ -0.42
COLCA2-206ENST00000638573 IGHV3-48P01763 117 aa12.43□□□□□ -0.42
COLCA2-206ENST00000638573 IFNA4P05014 189 aa12.43□□□□□ -0.42
COLCA2-206ENST00000638573 FCGR2BP31994 310 aaPredicted RBP12.43□□□□□ -0.42
COLCA2-206ENST00000638573 RELQ04864 619 aaPredicted RBP12.43□□□□□ -0.42
COLCA2-206ENST00000638573 GSG1LQ6UXU4 331 aa12.43□□□□□ -0.42
COLCA2-206ENST00000638573 GPHB5Q86YW7 130 aa12.43□□□□□ -0.42
COLCA2-206ENST00000638573 ZBTB8BQ8NAP8 495 aaPredicted RBP12.43□□□□□ -0.42
COLCA2-206ENST00000638573 OR10C1Q96KK4 312 aa12.43□□□□□ -0.42
COLCA2-206ENST00000638573 STAB2Q8WWQ8 2551 aa12.43□□□□□ -0.42
COLCA2-206ENST00000638573 HUWE1Q7Z6Z7 4374 aaKnown RBP12.43□□□□□ -0.42
COLCA2-206ENST00000638573 LGALS9O00182 355 aa12.42□□□□□ -0.42
COLCA2-206ENST00000638573 SLC25A4P12235 298 aa12.42□□□□□ -0.42
COLCA2-206ENST00000638573 ID3Q02535 119 aa12.42□□□□□ -0.42
COLCA2-206ENST00000638573 CACNG8Q8WXS5 425 aa12.42□□□□□ -0.42
COLCA2-206ENST00000638573 WFDC10AQ9H1F0 79 aa12.42□□□□□ -0.42
COLCA2-206ENST00000638573 F8W735 103 aaPredicted RBP12.41□□□□□ -0.42
COLCA2-206ENST00000638573 SSSCA1O60232 199 aa12.41□□□□□ -0.42
COLCA2-206ENST00000638573 POLR2GP62487 172 aaKnown RBP eCLIP12.41□□□□□ -0.42
COLCA2-206ENST00000638573 C19orf73Q9NVV2 129 aa12.41□□□□□ -0.42
COLCA2-206ENST00000638573 IGHV3-35A0A0C4DH35 117 aa12.4□□□□□ -0.42
COLCA2-206ENST00000638573 SSNA1O43805 119 aa12.4□□□□□ -0.42
COLCA2-206ENST00000638573 SPANXN5Q5MJ07 72 aa12.4□□□□□ -0.42
COLCA2-206ENST00000638573 OR4X1Q8NH49 305 aa12.4□□□□□ -0.42
COLCA2-206ENST00000638573 DYNLRB2Q8TF09 96 aa12.4□□□□□ -0.42
COLCA2-206ENST00000638573 TMEM170AQ8WVE7 144 aa12.4□□□□□ -0.42
COLCA2-206ENST00000638573 C2orf50Q96LR7 162 aa12.4□□□□□ -0.42
COLCA2-206ENST00000638573 CHRDL1Q9BU40 450 aa12.4□□□□□ -0.42
COLCA2-206ENST00000638573 ZNF436Q9C0F3 470 aaPredicted RBP12.4□□□□□ -0.42
COLCA2-206ENST00000638573 FNDC4Q9H6D8 234 aaPredicted RBP12.4□□□□□ -0.42
COLCA2-206ENST00000638573 RETNQ9HD89 108 aa12.4□□□□□ -0.42
COLCA2-206ENST00000638573 UFC1Q9Y3C8 167 aa12.4□□□□□ -0.42
COLCA2-206ENST00000638573 STRAPQ9Y3F4 350 aaKnown RBP12.4□□□□□ -0.42
COLCA2-206ENST00000638573 TRAV30A0A087WSZ9 112 aa12.39□□□□□ -0.43
COLCA2-206ENST00000638573 A8MWP6 167 aa12.39□□□□□ -0.43
COLCA2-206ENST00000638573 H3BP45 60 aa12.39□□□□□ -0.43
COLCA2-206ENST00000638573 NDUFA4O00483 81 aa12.39□□□□□ -0.43
COLCA2-206ENST00000638573 GOSR2O14653 212 aa12.39□□□□□ -0.43
COLCA2-206ENST00000638573 CLN5O75503 358 aa12.39□□□□□ -0.43
COLCA2-206ENST00000638573 CTSGP08311 255 aa12.39□□□□□ -0.43
COLCA2-206ENST00000638573 RGS21Q2M5E4 152 aa12.39□□□□□ -0.43
COLCA2-206ENST00000638573 CD300EQ496F6 205 aaPredicted RBP12.39□□□□□ -0.43
COLCA2-206ENST00000638573 SLC16A13Q7RTY0 426 aa12.39□□□□□ -0.43
COLCA2-206ENST00000638573 TMEM190Q8WZ59 177 aa12.39□□□□□ -0.43
COLCA2-206ENST00000638573 RAB40CQ96S21 281 aa12.39□□□□□ -0.43
COLCA2-206ENST00000638573 PSENENQ9NZ42 101 aa12.39□□□□□ -0.43
COLCA2-206ENST00000638573 C2orf70A6NJV1 201 aa12.38□□□□□ -0.43
COLCA2-206ENST00000638573 C15orf62A8K5M9 175 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms