RNA–Protein interactions for RNA: ENST00000638029.1

CACNA1A-258, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-258ENST00000638029 DEFB130BP0DP73 79 aa13.8□□□□□ -0.2
CACNA1A-258ENST00000638029 DEFB130AP0DP74 79 aa13.8□□□□□ -0.2
CACNA1A-258ENST00000638029 ZNF257Q9Y2Q1 563 aa13.8□□□□□ -0.2
CACNA1A-258ENST00000638029 C19orf24Q9BVV8 132 aa13.8□□□□□ -0.2
CACNA1A-258ENST00000638029 EFEMP2O95967 443 aa13.8□□□□□ -0.2
CACNA1A-258ENST00000638029 NEU4Q8WWR8 484 aaPredicted RBP13.8□□□□□ -0.2
CACNA1A-258ENST00000638029 TMEM126AQ9H061 195 aa13.8□□□□□ -0.2
CACNA1A-258ENST00000638029 PILRBQ9UKJ0 227 aa13.8□□□□□ -0.2
CACNA1A-258ENST00000638029 EML6Q6ZMW3 1958 aa13.8□□□□□ -0.2
CACNA1A-258ENST00000638029 TRAV25A0A0B4J276 109 aa13.79□□□□□ -0.2
CACNA1A-258ENST00000638029 TNFRSF6BO95407 300 aa13.79□□□□□ -0.2
CACNA1A-258ENST00000638029 SCO2A0A1W2PP80 73 aa13.79□□□□□ -0.2
CACNA1A-258ENST00000638029 PTP4A3O75365 173 aa13.79□□□□□ -0.2
CACNA1A-258ENST00000638029 IGKV1D-16P01601 117 aa13.79□□□□□ -0.2
CACNA1A-258ENST00000638029 C1QAP02745 245 aa13.79□□□□□ -0.2
CACNA1A-258ENST00000638029 SIRT4Q9Y6E7 314 aaPredicted RBP13.79□□□□□ -0.2
CACNA1A-258ENST00000638029 TCF23Q7RTU1 214 aa13.79□□□□□ -0.2
CACNA1A-258ENST00000638029 GATA2P23769 480 aaPredicted RBP13.79□□□□□ -0.2
CACNA1A-258ENST00000638029 TNFRSF9Q07011 255 aa13.79□□□□□ -0.2
CACNA1A-258ENST00000638029 SRXN1Q9BYN0 137 aa13.79□□□□□ -0.2
CACNA1A-258ENST00000638029 TRAV14DV4A0A0A6YYC5 116 aa13.79□□□□□ -0.2
CACNA1A-258ENST00000638029 MYOD1P15172 320 aa13.79□□□□□ -0.2
CACNA1A-258ENST00000638029 C5orf47Q569G3 176 aa13.79□□□□□ -0.2
CACNA1A-258ENST00000638029 TMEM186Q96B77 213 aa13.79□□□□□ -0.2
CACNA1A-258ENST00000638029 ZNF474Q6S9Z5 364 aaPredicted RBP13.79□□□□□ -0.2
CACNA1A-258ENST00000638029 LY75O60449 1722 aa13.78□□□□□ -0.2
CACNA1A-258ENST00000638029 GHRHP01286 108 aa13.78□□□□□ -0.2
CACNA1A-258ENST00000638029 FER1L6-AS1Q8NA97 138 aa13.78□□□□□ -0.2
CACNA1A-258ENST00000638029 FOXS1O43638 330 aa13.78□□□□□ -0.2
CACNA1A-258ENST00000638029 GAGE2BQ13066 116 aa13.78□□□□□ -0.2
CACNA1A-258ENST00000638029 RBMY1FQ15415 496 aaKnown RBP13.78□□□□□ -0.2
CACNA1A-258ENST00000638029 A0A1B0GW15 77 aa13.78□□□□□ -0.2
CACNA1A-258ENST00000638029 SMDT1Q9H4I9 107 aa13.78□□□□□ -0.2
CACNA1A-258ENST00000638029 ZMAT4Q9H898 229 aa13.78□□□□□ -0.2
CACNA1A-258ENST00000638029 FREM1Q5H8C1 2179 aa13.78□□□□□ -0.2
CACNA1A-258ENST00000638029 TRBV9A0A0B4J1U6 114 aa13.78□□□□□ -0.2
CACNA1A-258ENST00000638029 THAP8Q8NA92 274 aa13.78□□□□□ -0.2
CACNA1A-258ENST00000638029 TMEM52Q8NDY8 209 aa13.78□□□□□ -0.2
CACNA1A-258ENST00000638029 ZIC4Q8N9L1 334 aa13.78□□□□□ -0.2
CACNA1A-258ENST00000638029 RSPO3Q9BXY4 272 aaPredicted RBP13.78□□□□□ -0.2
CACNA1A-258ENST00000638029 A0A1W2PQF6 199 aa13.77□□□□□ -0.2
CACNA1A-258ENST00000638029 ACACAQ13085 2346 aa13.77□□□□□ -0.2
CACNA1A-258ENST00000638029 EGR4Q05215 589 aa13.77□□□□□ -0.2
CACNA1A-258ENST00000638029 DPM3Q9P2X0 92 aa13.77□□□□□ -0.2
CACNA1A-258ENST00000638029 ZNF124Q15973 351 aa13.77□□□□□ -0.2
CACNA1A-258ENST00000638029 TMEM54Q969K7 222 aa13.77□□□□□ -0.2
CACNA1A-258ENST00000638029 GGTLC1Q9BX51 225 aa13.77□□□□□ -0.2
CACNA1A-258ENST00000638029 NPCDR1Q9BY65 106 aa13.77□□□□□ -0.2
CACNA1A-258ENST00000638029 MED12LQ86YW9 2145 aa13.77□□□□□ -0.2
CACNA1A-258ENST00000638029 F5H768 121 aa13.77□□□□□ -0.21
CACNA1A-258ENST00000638029 CHTOPQ9Y3Y2 248 aaKnown RBP13.77□□□□□ -0.21
CACNA1A-258ENST00000638029 IGFBP2P18065 325 aa13.77□□□□□ -0.21
CACNA1A-258ENST00000638029 GNLYP22749 145 aa13.77□□□□□ -0.21
CACNA1A-258ENST00000638029 G6PC2Q9NQR9 355 aa13.77□□□□□ -0.21
CACNA1A-258ENST00000638029 RND3P61587 244 aa13.77□□□□□ -0.21
CACNA1A-258ENST00000638029 SCN10AQ9Y5Y9 1956 aa13.77□□□□□ -0.21
CACNA1A-258ENST00000638029 LOC102723996A0A087X1L8 192 aa13.76□□□□□ -0.21
CACNA1A-258ENST00000638029 CCL1P22362 96 aa13.76□□□□□ -0.21
CACNA1A-258ENST00000638029 RCHY1Q96PM5 261 aa13.76□□□□□ -0.21
CACNA1A-258ENST00000638029 C22orf46C9J442 243 aa13.76□□□□□ -0.21
CACNA1A-258ENST00000638029 DLL3Q9NYJ7 618 aa13.76□□□□□ -0.21
CACNA1A-258ENST00000638029 TRAV5A0A0B4J249 113 aa13.76□□□□□ -0.21
CACNA1A-258ENST00000638029 NANOS3P60323 173 aaKnown RBP13.76□□□□□ -0.21
CACNA1A-258ENST00000638029 CD300EQ496F6 205 aaPredicted RBP13.76□□□□□ -0.21
CACNA1A-258ENST00000638029 FAM166AQ6J272 317 aa13.76□□□□□ -0.21
CACNA1A-258ENST00000638029 OSR1Q8TAX0 266 aaPredicted RBP13.76□□□□□ -0.21
CACNA1A-258ENST00000638029 DKK4Q9UBT3 224 aa13.76□□□□□ -0.21
CACNA1A-258ENST00000638029 UCP3P55916 312 aa13.76□□□□□ -0.21
CACNA1A-258ENST00000638029 ZNF660Q6AZW8 331 aaPredicted RBP13.75□□□□□ -0.21
CACNA1A-258ENST00000638029 COL11A2P13942 1736 aaPredicted RBP13.75□□□□□ -0.21
CACNA1A-258ENST00000638029 PLA2G10O15496 165 aa13.75□□□□□ -0.21
CACNA1A-258ENST00000638029 TFF3Q07654 80 aa13.75□□□□□ -0.21
CACNA1A-258ENST00000638029 Q9H3A6 140 aa13.75□□□□□ -0.21
CACNA1A-258ENST00000638029 OR10W1Q8NGF6 305 aa13.75□□□□□ -0.21
CACNA1A-258ENST00000638029 EPDR1Q9UM22 224 aa13.75□□□□□ -0.21
CACNA1A-258ENST00000638029 PTGDSP41222 190 aa13.75□□□□□ -0.21
CACNA1A-258ENST00000638029 SAMD5Q5TGI4 173 aa13.75□□□□□ -0.21
CACNA1A-258ENST00000638029 COL24A1Q17RW2 1714 aa13.75□□□□□ -0.21
CACNA1A-258ENST00000638029 NBEAP1P0C6P0 100 aa13.75□□□□□ -0.21
CACNA1A-258ENST00000638029 PAX1P15863 534 aa13.75□□□□□ -0.21
CACNA1A-258ENST00000638029 TIMM23BQ5SRD1 257 aa13.75□□□□□ -0.21
CACNA1A-258ENST00000638029 C5orf30Q96GV9 206 aa13.75□□□□□ -0.21
CACNA1A-258ENST00000638029 SCRT1Q9BWW7 348 aa13.74□□□□□ -0.21
CACNA1A-258ENST00000638029 TMEM222Q9H0R3 208 aa13.74□□□□□ -0.21
CACNA1A-258ENST00000638029 H3BMM0 161 aa13.74□□□□□ -0.21
CACNA1A-258ENST00000638029 SLC25A45Q8N413 288 aa13.74□□□□□ -0.21
CACNA1A-258ENST00000638029 UBE2WQ96B02 151 aa13.74□□□□□ -0.21
CACNA1A-258ENST00000638029 NAA38Q9BRA0 125 aaKnown RBP13.74□□□□□ -0.21
CACNA1A-258ENST00000638029 hADV29S1A0JD25 119 aa13.74□□□□□ -0.21
CACNA1A-258ENST00000638029 TCRAP04437 139 aa13.74□□□□□ -0.21
CACNA1A-258ENST00000638029 LGALS1P09382 135 aaKnown RBP13.74□□□□□ -0.21
CACNA1A-258ENST00000638029 HSPE1P61604 102 aaKnown RBP13.74□□□□□ -0.21
CACNA1A-258ENST00000638029 CENPVL1A0A0U1RR11 272 aa13.74□□□□□ -0.21
CACNA1A-258ENST00000638029 TMEM8BA6NDV4 472 aa13.74□□□□□ -0.21
CACNA1A-258ENST00000638029 TRAV12-1A0A0B4J245 112 aa13.74□□□□□ -0.21
CACNA1A-258ENST00000638029 CD5LO43866 347 aa13.74□□□□□ -0.21
CACNA1A-258ENST00000638029 GCHFRP30047 84 aa13.74□□□□□ -0.21
CACNA1A-258ENST00000638029 HIST1H2BAQ96A08 127 aa13.74□□□□□ -0.21
CACNA1A-258ENST00000638029 LINC00587B1AMM8 73 aa13.74□□□□□ -0.21
CACNA1A-258ENST00000638029 TBR1Q16650 682 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms