RNA–Protein interactions for RNA: ENST00000629045.1

SCARNA4-201, small Cajal body-specific RNA 4, humanhuman

BASIC

Gene SCARNA4, Length 128 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA4-201ENST00000629045 ZNF736B4DX44 427 aaPredicted RBP0.15□□□□□ -2.39
SCARNA4-201ENST00000629045 AP2S1P53680 142 aaPredicted RBP0.15□□□□□ -2.39
SCARNA4-201ENST00000629045 C20orf196Q8IYI0 205 aa0.15□□□□□ -2.39
SCARNA4-201ENST00000629045 OR10J5Q8NHC4 309 aa0.15□□□□□ -2.39
SCARNA4-201ENST00000629045 C4orf3Q8WVX3 66 aa0.15□□□□□ -2.39
SCARNA4-201ENST00000629045 SLC35B4Q969S0 331 aa0.15□□□□□ -2.39
SCARNA4-201ENST00000629045 TOMM6Q96B49 74 aa0.15□□□□□ -2.39
SCARNA4-201ENST00000629045 CFAP53Q96M91 514 aa0.15□□□□□ -2.39
SCARNA4-201ENST00000629045 C10orf95Q9H7T3 257 aa0.15□□□□□ -2.39
SCARNA4-201ENST00000629045 PRTFDC1Q9NRG1 225 aa0.15□□□□□ -2.39
SCARNA4-201ENST00000629045 HS3ST2Q9Y278 367 aa0.15□□□□□ -2.39
SCARNA4-201ENST00000629045 ANAPC1Q9H1A4 1944 aa0.15□□□□□ -2.39
SCARNA4-201ENST00000629045 MDN1Q9NU22 5596 aa0.14□□□□□ -2.39
SCARNA4-201ENST00000629045 C9orf84Q5VXU9 1444 aa0.14□□□□□ -2.39
SCARNA4-201ENST00000629045 TOPBP1Q92547 1522 aa0.14□□□□□ -2.39
SCARNA4-201ENST00000629045 TRAV3A0A0B4J244 114 aa0.14□□□□□ -2.39
SCARNA4-201ENST00000629045 EXOC1LA0A1B0GW35 172 aa0.14□□□□□ -2.39
SCARNA4-201ENST00000629045 BUB1B-PAK6H3BSN5 160 aa0.14□□□□□ -2.39
SCARNA4-201ENST00000629045 PSMD12O00232 456 aaPredicted RBP0.14□□□□□ -2.39
SCARNA4-201ENST00000629045 FAAHO00519 579 aa0.14□□□□□ -2.39
SCARNA4-201ENST00000629045 DNAL4O96015 105 aa0.14□□□□□ -2.39
SCARNA4-201ENST00000629045 TNNC2P02585 160 aa0.14□□□□□ -2.39
SCARNA4-201ENST00000629045 PRH1P02810 166 aa0.14□□□□□ -2.39
SCARNA4-201ENST00000629045 EFNA4P52798 201 aa0.14□□□□□ -2.39
SCARNA4-201ENST00000629045 CDC42P60953 191 aa0.14□□□□□ -2.39
SCARNA4-201ENST00000629045 SRSF6Q13247 344 aaKnown RBP0.14□□□□□ -2.39
SCARNA4-201ENST00000629045 GKN2Q86XP6 184 aa0.14□□□□□ -2.39
SCARNA4-201ENST00000629045 ANKRD29Q8N6D5 301 aa0.14□□□□□ -2.39
SCARNA4-201ENST00000629045 C3orf56Q8N813 242 aa0.14□□□□□ -2.39
SCARNA4-201ENST00000629045 OR13D1Q8NGV5 346 aa0.14□□□□□ -2.39
SCARNA4-201ENST00000629045 GPR146Q96CH1 333 aa0.14□□□□□ -2.39
SCARNA4-201ENST00000629045 OR52E6Q96RD3 313 aa0.14□□□□□ -2.39
SCARNA4-201ENST00000629045 SMR3AQ99954 134 aa0.14□□□□□ -2.39
SCARNA4-201ENST00000629045 OSTCQ9NRP0 149 aa0.14□□□□□ -2.39
SCARNA4-201ENST00000629045 NHP2Q9NX24 153 aaKnown RBP0.14□□□□□ -2.39
SCARNA4-201ENST00000629045 SLC35A3Q9Y2D2 325 aa0.14□□□□□ -2.39
SCARNA4-201ENST00000629045 MTUS2Q5JR59 1369 aa0.14□□□□□ -2.39
SCARNA4-201ENST00000629045 COL4A5P29400 1685 aa0.14□□□□□ -2.39
SCARNA4-201ENST00000629045 STRCQ7RTU9 1775 aa0.14□□□□□ -2.39
SCARNA4-201ENST00000629045 TGIF2-C20orf24A0A0A6YYL0 155 aa0.13□□□□□ -2.39
SCARNA4-201ENST00000629045 CCL25O15444 150 aa0.13□□□□□ -2.39
SCARNA4-201ENST00000629045 TGOLN2O43493 480 aa0.13□□□□□ -2.39
SCARNA4-201ENST00000629045 CALB1P05937 261 aa0.13□□□□□ -2.39
SCARNA4-201ENST00000629045 TPM3P06753 285 aa0.13□□□□□ -2.39
SCARNA4-201ENST00000629045 CD79AP11912 226 aa0.13□□□□□ -2.39
SCARNA4-201ENST00000629045 HIST1H1TP22492 207 aaPredicted RBP0.13□□□□□ -2.39
SCARNA4-201ENST00000629045 S100A4P26447 101 aaKnown RBP0.13□□□□□ -2.39
SCARNA4-201ENST00000629045 SPCS3P61009 180 aa0.13□□□□□ -2.39
SCARNA4-201ENST00000629045 PSME3P61289 254 aa0.13□□□□□ -2.39
SCARNA4-201ENST00000629045 SNRPD2P62316 118 aaKnown RBP0.13□□□□□ -2.39
SCARNA4-201ENST00000629045 PSG9Q00887 426 aa0.13□□□□□ -2.39
SCARNA4-201ENST00000629045 HIST3H3Q16695 136 aa0.13□□□□□ -2.39
SCARNA4-201ENST00000629045 DEFB113Q30KQ7 82 aa0.13□□□□□ -2.39
SCARNA4-201ENST00000629045 TRAPPC6BQ86SZ2 158 aa0.13□□□□□ -2.39
SCARNA4-201ENST00000629045 CLECL1Q8IZS7 167 aa0.13□□□□□ -2.39
SCARNA4-201ENST00000629045 TMEM86BQ8N661 226 aa0.13□□□□□ -2.39
SCARNA4-201ENST00000629045 OR52R1Q8NGF1 315 aa0.13□□□□□ -2.39
SCARNA4-201ENST00000629045 PTH2Q96A98 100 aa0.13□□□□□ -2.39
SCARNA4-201ENST00000629045 PPP1R2P1Q96PQ5 205 aa0.13□□□□□ -2.39
SCARNA4-201ENST00000629045 MRPS26Q9BYN8 205 aaKnown RBP0.13□□□□□ -2.39
SCARNA4-201ENST00000629045 NKIRAS1Q9NYS0 192 aa0.13□□□□□ -2.39
SCARNA4-201ENST00000629045 PKIGQ9Y2B9 76 aa0.13□□□□□ -2.39
SCARNA4-201ENST00000629045 ATP6V1DQ9Y5K8 247 aa0.13□□□□□ -2.39
SCARNA4-201ENST00000629045 TMEM56-RWDD3S4R434 201 aa0.13□□□□□ -2.39
SCARNA4-201ENST00000629045 MUC5ACP98088 5654 aa0.13□□□□□ -2.39
SCARNA4-201ENST00000629045 OR2T8A6NH00 312 aa0.12□□□□□ -2.39
SCARNA4-201ENST00000629045 CRYZL1O95825 349 aa0.12□□□□□ -2.39
SCARNA4-201ENST00000629045 RPL5P46777 297 aaKnown RBP0.12□□□□□ -2.39
SCARNA4-201ENST00000629045 DEFA1P59665 94 aa0.12□□□□□ -2.39
SCARNA4-201ENST00000629045 RPS20P60866 119 aaKnown RBP0.12□□□□□ -2.39
SCARNA4-201ENST00000629045 TPM4P67936 248 aa0.12□□□□□ -2.39
SCARNA4-201ENST00000629045 SPRNQ5BIV9 151 aa0.12□□□□□ -2.39
SCARNA4-201ENST00000629045 FAM74A1Q5RGS3 127 aa0.12□□□□□ -2.39
SCARNA4-201ENST00000629045 SPOPLQ6IQ16 392 aa0.12□□□□□ -2.39
SCARNA4-201ENST00000629045 ITFG2Q969R8 447 aa0.12□□□□□ -2.39
SCARNA4-201ENST00000629045 LLPHQ9BRT6 129 aaKnown RBP0.12□□□□□ -2.39
SCARNA4-201ENST00000629045 C6orf62Q9GZU0 229 aaPredicted RBP0.12□□□□□ -2.39
SCARNA4-201ENST00000629045 NIT2Q9NQR4 276 aa0.12□□□□□ -2.39
SCARNA4-201ENST00000629045 EPDR1Q9UM22 224 aa0.12□□□□□ -2.39
SCARNA4-201ENST00000629045 V9GYY5 206 aaPredicted RBP0.12□□□□□ -2.39
SCARNA4-201ENST00000629045 ZNF462Q96JM2 2506 aa0.12□□□□□ -2.39
SCARNA4-201ENST00000629045 SCN3AQ9NY46 2000 aa0.11□□□□□ -2.39
SCARNA4-201ENST00000629045 C7orf71A4D174 169 aa0.11□□□□□ -2.39
SCARNA4-201ENST00000629045 OR4C46A6NHA9 309 aa0.11□□□□□ -2.39
SCARNA4-201ENST00000629045 CCL16O15467 120 aa0.11□□□□□ -2.39
SCARNA4-201ENST00000629045 KLF7O75840 302 aaPredicted RBP0.11□□□□□ -2.39
SCARNA4-201ENST00000629045 HIST1H1EP10412 219 aaKnown RBP0.11□□□□□ -2.39
SCARNA4-201ENST00000629045 YPEL3P61236 119 aaPredicted RBP0.11□□□□□ -2.39
SCARNA4-201ENST00000629045 ESRGQ1W209 222 aa0.11□□□□□ -2.39
SCARNA4-201ENST00000629045 ACOT6Q3I5F7 207 aaPredicted RBP0.11□□□□□ -2.39
SCARNA4-201ENST00000629045 LINC01554Q52M75 96 aa0.11□□□□□ -2.39
SCARNA4-201ENST00000629045 BRMS1LQ5PSV4 323 aa0.11□□□□□ -2.39
SCARNA4-201ENST00000629045 C8orf74Q6P047 294 aa0.11□□□□□ -2.39
SCARNA4-201ENST00000629045 LINC00322Q6ZN03 302 aaPredicted RBP0.11□□□□□ -2.39
SCARNA4-201ENST00000629045 TEX47Q8TBZ9 253 aa0.11□□□□□ -2.39
SCARNA4-201ENST00000629045 TSPAN32Q96QS1 320 aa0.11□□□□□ -2.39
SCARNA4-201ENST00000629045 C20orf27Q9GZN8 174 aa0.11□□□□□ -2.39
SCARNA4-201ENST00000629045 TLNRD1Q9H1K6 362 aa0.11□□□□□ -2.39
SCARNA4-201ENST00000629045 DCSTAMPQ9H295 470 aa0.11□□□□□ -2.39
SCARNA4-201ENST00000629045 OR51V1Q9H2C8 321 aa0.11□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms