RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 UHRF2Q96PU4 802 aa10.91□□□□□ -0.66
NEK3-205ENST00000610828 SLC25A33Q9BSK2 321 aa10.91□□□□□ -0.66
NEK3-205ENST00000610828 UBTD1Q9HAC8 227 aa10.91□□□□□ -0.66
NEK3-205ENST00000610828 HILPDAQ9Y5L2 63 aa10.91□□□□□ -0.66
NEK3-205ENST00000610828 PIEZO1Q92508 2521 aa10.91□□□□□ -0.66
NEK3-205ENST00000610828 TCRBV4S1A1TA0A5B7 111 aa10.91□□□□□ -0.66
NEK3-205ENST00000610828 NDUFS7O75251 213 aa10.91□□□□□ -0.66
NEK3-205ENST00000610828 S100A9P06702 114 aaKnown RBP10.91□□□□□ -0.66
NEK3-205ENST00000610828 C8orf88P0DMB2 117 aa10.91□□□□□ -0.66
NEK3-205ENST00000610828 HNF1AP20823 631 aa10.91□□□□□ -0.66
NEK3-205ENST00000610828 GNLYP22749 145 aa10.91□□□□□ -0.66
NEK3-205ENST00000610828 TPTE2P1Q5T6R2 138 aa10.91□□□□□ -0.66
NEK3-205ENST00000610828 LURAP1LQ8IV03 231 aa10.91□□□□□ -0.66
NEK3-205ENST00000610828 ITLN2Q8WWU7 325 aaPredicted RBP10.91□□□□□ -0.66
NEK3-205ENST00000610828 DNAJC4Q9NNZ3 241 aa10.91□□□□□ -0.66
NEK3-205ENST00000610828 CSMD1Q96PZ7 3565 aa10.91□□□□□ -0.66
NEK3-205ENST00000610828 IGKV1D-37A0A075B6S9 117 aa10.9□□□□□ -0.66
NEK3-205ENST00000610828 A0A1W2PPQ1 181 aa10.9□□□□□ -0.66
NEK3-205ENST00000610828 COX7A2P2O60397 106 aa10.9□□□□□ -0.66
NEK3-205ENST00000610828 HIST1H2BKO60814 126 aa10.9□□□□□ -0.66
NEK3-205ENST00000610828 HIST1H2BJP06899 126 aa10.9□□□□□ -0.66
NEK3-205ENST00000610828 HIST1H2BOP23527 126 aa10.9□□□□□ -0.66
NEK3-205ENST00000610828 HIST1H2BBP33778 126 aa10.9□□□□□ -0.66
NEK3-205ENST00000610828 GPR6P46095 362 aaPredicted RBP10.9□□□□□ -0.66
NEK3-205ENST00000610828 MFAP2P55001 183 aa10.9□□□□□ -0.66
NEK3-205ENST00000610828 NDUFA6P56556 154 aa10.9□□□□□ -0.66
NEK3-205ENST00000610828 HIST1H2BDP58876 126 aa10.9□□□□□ -0.66
NEK3-205ENST00000610828 HIST1H2BCP62807 126 aa10.9□□□□□ -0.66
NEK3-205ENST00000610828 HIST2H2BEQ16778 126 aa10.9□□□□□ -0.66
NEK3-205ENST00000610828 C4orf17Q53FE4 359 aa10.9□□□□□ -0.66
NEK3-205ENST00000610828 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.9□□□□□ -0.66
NEK3-205ENST00000610828 MORN5Q5VZ52 161 aa10.9□□□□□ -0.66
NEK3-205ENST00000610828 HIST1H2BHQ93079 126 aa10.9□□□□□ -0.66
NEK3-205ENST00000610828 HIST1H2BNQ99877 126 aa10.9□□□□□ -0.66
NEK3-205ENST00000610828 HIST1H2BMQ99879 126 aa10.9□□□□□ -0.66
NEK3-205ENST00000610828 DPM3Q9P2X0 92 aa10.9□□□□□ -0.66
NEK3-205ENST00000610828 A0A1W2PRD5 423 aa10.9□□□□□ -0.66
NEK3-205ENST00000610828 A0A1W2PRF3 423 aa10.9□□□□□ -0.66
NEK3-205ENST00000610828 A0A1W2PRM7 423 aa10.9□□□□□ -0.66
NEK3-205ENST00000610828 PSMB11A5LHX3 300 aa10.9□□□□□ -0.66
NEK3-205ENST00000610828 M0R1W7 72 aa10.9□□□□□ -0.66
NEK3-205ENST00000610828 FCN1O00602 326 aa10.9□□□□□ -0.66
NEK3-205ENST00000610828 RUSC1-AS1Q66K80 236 aa10.9□□□□□ -0.66
NEK3-205ENST00000610828 ETFRF1Q6IPR1 90 aa10.9□□□□□ -0.66
NEK3-205ENST00000610828 OR11H6Q8NGC7 330 aa10.9□□□□□ -0.66
NEK3-205ENST00000610828 MRPL32Q9BYC8 188 aaKnown RBP10.9□□□□□ -0.66
NEK3-205ENST00000610828 IGHV3-21A0A0B4J1V1 117 aa10.89□□□□□ -0.67
NEK3-205ENST00000610828 TRAV5A0A0B4J249 113 aa10.89□□□□□ -0.67
NEK3-205ENST00000610828 SMIM6P0DI80 62 aa10.89□□□□□ -0.67
NEK3-205ENST00000610828 MMDQ15546 238 aa10.89□□□□□ -0.67
NEK3-205ENST00000610828 LHFPL4Q7Z7J7 247 aa10.89□□□□□ -0.67
NEK3-205ENST00000610828 THAP8Q8NA92 274 aa10.89□□□□□ -0.67
NEK3-205ENST00000610828 OR4X1Q8NH49 305 aa10.89□□□□□ -0.67
NEK3-205ENST00000610828 IGFBPL1Q8WX77 278 aa10.89□□□□□ -0.67
NEK3-205ENST00000610828 SRSF12Q8WXF0 261 aaKnown RBP10.89□□□□□ -0.67
NEK3-205ENST00000610828 FRZBQ92765 325 aa10.89□□□□□ -0.67
NEK3-205ENST00000610828 PKD1L2Q7Z442 2459 aa10.89□□□□□ -0.67
NEK3-205ENST00000610828 TGOLN2O43493 480 aa10.89□□□□□ -0.67
NEK3-205ENST00000610828 MOSP00540 346 aa10.89□□□□□ -0.67
NEK3-205ENST00000610828 CEACAM3P40198 252 aa10.89□□□□□ -0.67
NEK3-205ENST00000610828 LGALS4P56470 323 aa10.89□□□□□ -0.67
NEK3-205ENST00000610828 C10orf113Q5VZT2 155 aa10.89□□□□□ -0.67
NEK3-205ENST00000610828 OR1L4Q8NGR5 311 aa10.89□□□□□ -0.67
NEK3-205ENST00000610828 OR1P1Q8NH06 330 aa10.89□□□□□ -0.67
NEK3-205ENST00000610828 OCC1Q8TAD7 63 aa10.89□□□□□ -0.67
NEK3-205ENST00000610828 SFRP2Q96HF1 295 aa10.89□□□□□ -0.67
NEK3-205ENST00000610828 PFDN5Q99471 154 aa10.89□□□□□ -0.67
NEK3-205ENST00000610828 RNF2Q99496 336 aa10.89□□□□□ -0.67
NEK3-205ENST00000610828 RNF5Q99942 180 aa10.89□□□□□ -0.67
NEK3-205ENST00000610828 ARL2-SNX15V9GYD0 113 aa10.89□□□□□ -0.67
NEK3-205ENST00000610828 MDFIC2A0A1B0GVS7 189 aa10.88□□□□□ -0.67
NEK3-205ENST00000610828 TEX22C9J3V5 150 aa10.88□□□□□ -0.67
NEK3-205ENST00000610828 PPP5D1E7EU14 171 aa10.88□□□□□ -0.67
NEK3-205ENST00000610828 TRGC1P0CF51 173 aa10.88□□□□□ -0.67
NEK3-205ENST00000610828 CD99P14209 185 aa10.88□□□□□ -0.67
NEK3-205ENST00000610828 PRTN3P24158 256 aa10.88□□□□□ -0.67
NEK3-205ENST00000610828 CD24P25063 80 aa10.88□□□□□ -0.67
NEK3-205ENST00000610828 BPIFB3P59826 476 aa10.88□□□□□ -0.67
NEK3-205ENST00000610828 SELENOTP62341 195 aa10.88□□□□□ -0.67
NEK3-205ENST00000610828 OR5AU1Q8NGC0 362 aa10.88□□□□□ -0.67
NEK3-205ENST00000610828 C22orf15Q8WYQ4 148 aa10.88□□□□□ -0.67
NEK3-205ENST00000610828 C11orf52Q96A22 123 aa10.88□□□□□ -0.67
NEK3-205ENST00000610828 PYGO2Q9BRQ0 406 aa10.88□□□□□ -0.67
NEK3-205ENST00000610828 SLC25A2Q9BXI2 301 aa10.88□□□□□ -0.67
NEK3-205ENST00000610828 C19orf84I3L1E1 186 aa10.88□□□□□ -0.67
NEK3-205ENST00000610828 CNIH1O95406 144 aa10.88□□□□□ -0.67
NEK3-205ENST00000610828 CRYBB3P26998 211 aa10.88□□□□□ -0.67
NEK3-205ENST00000610828 SRP14P37108 136 aaKnown RBP10.88□□□□□ -0.67
NEK3-205ENST00000610828 KCNIP4Q6PIL6 250 aa10.88□□□□□ -0.67
NEK3-205ENST00000610828 PATE2Q6UY27 113 aa10.88□□□□□ -0.67
NEK3-205ENST00000610828 FAM167A-AS1Q96KT0 104 aa10.88□□□□□ -0.67
NEK3-205ENST00000610828 TCEAL7Q9BRU2 100 aa10.88□□□□□ -0.67
NEK3-205ENST00000610828 SRD5A3Q9H8P0 318 aa10.88□□□□□ -0.67
NEK3-205ENST00000610828 TNFRSF19Q9NS68 423 aa10.88□□□□□ -0.67
NEK3-205ENST00000610828 ZNF355PQ9NSJ1 428 aa10.88□□□□□ -0.67
NEK3-205ENST00000610828 F11RQ9Y624 299 aaKnown RBP10.88□□□□□ -0.67
NEK3-205ENST00000610828 CRYGCP07315 174 aa10.87□□□□□ -0.67
NEK3-205ENST00000610828 FAM3BP58499 235 aaPredicted RBP10.87□□□□□ -0.67
NEK3-205ENST00000610828 SUMO1P63165 101 aaKnown RBP10.87□□□□□ -0.67
NEK3-205ENST00000610828 UBE2L3P68036 154 aaKnown RBP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms