RNA–Protein interactions for RNA: ENST00000608532.1

HDDC2-207, Transcript of HD domain containing 2, humanhuman

TSL 3

Gene HDDC2, Length 553 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-207ENST00000608532 CMTM5Q96DZ9 223 aa-0.11□□□□□ -2.43
HDDC2-207ENST00000608532 IMP4Q96G21 291 aaKnown RBP-0.11□□□□□ -2.43
HDDC2-207ENST00000608532 COMMD5Q9GZQ3 224 aa-0.11□□□□□ -2.43
HDDC2-207ENST00000608532 PLEKHJ1Q9NW61 149 aa-0.11□□□□□ -2.43
HDDC2-207ENST00000608532 HEATR1Q9H583 2144 aaKnown RBP-0.11□□□□□ -2.43
HDDC2-207ENST00000608532 DCCP43146 1447 aa-0.12□□□□□ -2.43
HDDC2-207ENST00000608532 A0A0D9SG42 100 aa-0.12□□□□□ -2.43
HDDC2-207ENST00000608532 GOLGA8KD6RF30 607 aa-0.12□□□□□ -2.43
HDDC2-207ENST00000608532 CCL25O15444 150 aa-0.12□□□□□ -2.43
HDDC2-207ENST00000608532 IGLV3-1P01715 115 aa-0.12□□□□□ -2.43
HDDC2-207ENST00000608532 COX6A1P12074 109 aa-0.12□□□□□ -2.43
HDDC2-207ENST00000608532 UCHL3P15374 230 aa-0.12□□□□□ -2.43
HDDC2-207ENST00000608532 BLVRAP53004 296 aa-0.12□□□□□ -2.43
HDDC2-207ENST00000608532 UBE2G2P60604 165 aa-0.12□□□□□ -2.43
HDDC2-207ENST00000608532 SFXN4Q6P4A7 337 aa-0.12□□□□□ -2.43
HDDC2-207ENST00000608532 Q6ZS49 121 aa-0.12□□□□□ -2.43
HDDC2-207ENST00000608532 TSPAN32Q96QS1 320 aa-0.12□□□□□ -2.43
HDDC2-207ENST00000608532 PRRT1Q99946 306 aa-0.12□□□□□ -2.43
HDDC2-207ENST00000608532 UPF3BQ9BZI7 483 aaKnown RBP-0.12□□□□□ -2.43
HDDC2-207ENST00000608532 TLNRD1Q9H1K6 362 aa-0.12□□□□□ -2.43
HDDC2-207ENST00000608532 MIXL1Q9H2W2 232 aa-0.12□□□□□ -2.43
HDDC2-207ENST00000608532 NCOR2Q9Y618 2525 aa-0.12□□□□□ -2.43
HDDC2-207ENST00000608532 SIP14410 1827 aa-0.13□□□□□ -2.43
HDDC2-207ENST00000608532 FANCMQ8IYD8 2048 aa-0.13□□□□□ -2.43
HDDC2-207ENST00000608532 TRAV3A0A0B4J244 114 aa-0.13□□□□□ -2.43
HDDC2-207ENST00000608532 FAAHO00519 579 aa-0.13□□□□□ -2.43
HDDC2-207ENST00000608532 COX5BP10606 129 aa-0.13□□□□□ -2.43
HDDC2-207ENST00000608532 HBA1P69905 142 aa-0.13□□□□□ -2.43
HDDC2-207ENST00000608532 DEFB113Q30KQ7 82 aa-0.13□□□□□ -2.43
HDDC2-207ENST00000608532 CLEC6AQ6EIG7 209 aa-0.13□□□□□ -2.43
HDDC2-207ENST00000608532 SPINK6Q6UWN8 80 aa-0.13□□□□□ -2.43
HDDC2-207ENST00000608532 LINC00575Q6W349 94 aa-0.13□□□□□ -2.43
HDDC2-207ENST00000608532 GRINAQ7Z429 371 aa-0.13□□□□□ -2.43
HDDC2-207ENST00000608532 CLECL1Q8IZS7 167 aa-0.13□□□□□ -2.43
HDDC2-207ENST00000608532 C3orf56Q8N813 242 aa-0.13□□□□□ -2.43
HDDC2-207ENST00000608532 PLPP5Q8NEB5 264 aa-0.13□□□□□ -2.43
HDDC2-207ENST00000608532 MRPL30Q8TCC3 161 aaKnown RBP-0.13□□□□□ -2.43
HDDC2-207ENST00000608532 ITFG2Q969R8 447 aa-0.13□□□□□ -2.43
HDDC2-207ENST00000608532 NABP2Q9BQ15 211 aa-0.13□□□□□ -2.43
HDDC2-207ENST00000608532 TMEM14CQ9P0S9 112 aa-0.13□□□□□ -2.43
HDDC2-207ENST00000608532 C3orf18Q9UK00 162 aa-0.13□□□□□ -2.43
HDDC2-207ENST00000608532 CHD3Q12873 2000 aaKnown RBP-0.13□□□□□ -2.43
HDDC2-207ENST00000608532 TAF1LQ8IZX4 1826 aa-0.13□□□□□ -2.43
HDDC2-207ENST00000608532 MYO18AQ92614 2054 aaKnown RBP-0.14□□□□□ -2.43
HDDC2-207ENST00000608532 TET1Q8NFU7 2136 aa-0.14□□□□□ -2.43
HDDC2-207ENST00000608532 ZDBF2Q9HCK1 2354 aa-0.14□□□□□ -2.43
HDDC2-207ENST00000608532 OR2B3O76000 313 aa-0.14□□□□□ -2.43
HDDC2-207ENST00000608532 TCL1BO95988 128 aa-0.14□□□□□ -2.43
HDDC2-207ENST00000608532 MLLT11Q13015 90 aaPredicted RBP-0.14□□□□□ -2.43
HDDC2-207ENST00000608532 CLVS2Q5SYC1 327 aa-0.14□□□□□ -2.43
HDDC2-207ENST00000608532 LINC00322Q6ZN03 302 aaPredicted RBP-0.14□□□□□ -2.43
HDDC2-207ENST00000608532 Q6ZS92 163 aa-0.14□□□□□ -2.43
HDDC2-207ENST00000608532 TERB2Q8NHR7 220 aa-0.14□□□□□ -2.43
HDDC2-207ENST00000608532 DCSTAMPQ9H295 470 aa-0.14□□□□□ -2.43
HDDC2-207ENST00000608532 XPNPEP1Q9NQW7 623 aa-0.14□□□□□ -2.43
HDDC2-207ENST00000608532 CMTM6Q9NX76 183 aa-0.14□□□□□ -2.43
HDDC2-207ENST00000608532 MYH10P35580 1976 aa-0.14□□□□□ -2.43
HDDC2-207ENST00000608532 IGF2RP11717 2491 aa-0.15□□□□□ -2.43
HDDC2-207ENST00000608532 LINC00854A0A1B0GVQ3 168 aa-0.15□□□□□ -2.43
HDDC2-207ENST00000608532 BUB1B-PAK6H3BSN5 160 aa-0.15□□□□□ -2.43
HDDC2-207ENST00000608532 CXCR6O00574 342 aa-0.15□□□□□ -2.43
HDDC2-207ENST00000608532 C8orf88P0DMB2 117 aa-0.15□□□□□ -2.43
HDDC2-207ENST00000608532 MYL12AP19105 171 aa-0.15□□□□□ -2.43
HDDC2-207ENST00000608532 NAA20P61599 178 aa-0.15□□□□□ -2.43
HDDC2-207ENST00000608532 SIGLECL1Q8N7X8 197 aa-0.15□□□□□ -2.43
HDDC2-207ENST00000608532 OR52R1Q8NGF1 315 aa-0.15□□□□□ -2.43
HDDC2-207ENST00000608532 OR51I1Q9H343 314 aa-0.15□□□□□ -2.43
HDDC2-207ENST00000608532 SLC35A3Q9Y2D2 325 aa-0.15□□□□□ -2.43
HDDC2-207ENST00000608532 MUC4Q99102 2169 aa-0.15□□□□□ -2.43
HDDC2-207ENST00000608532 UNC13CQ8NB66 2214 aa-0.15□□□□□ -2.43
HDDC2-207ENST00000608532 A0A1B0GV50 99 aa-0.16□□□□□ -2.44
HDDC2-207ENST00000608532 M0R378 163 aa-0.16□□□□□ -2.44
HDDC2-207ENST00000608532 CALUO43852 315 aaPredicted RBP-0.16□□□□□ -2.44
HDDC2-207ENST00000608532 KLF7O75840 302 aaPredicted RBP-0.16□□□□□ -2.44
HDDC2-207ENST00000608532 HOXA6P31267 233 aa-0.16□□□□□ -2.44
HDDC2-207ENST00000608532 ZNF137PP52743 207 aa-0.16□□□□□ -2.44
HDDC2-207ENST00000608532 C6orf52Q5T4I8 152 aa-0.16□□□□□ -2.44
HDDC2-207ENST00000608532 PLEKHG7Q6ZR37 379 aa-0.16□□□□□ -2.44
HDDC2-207ENST00000608532 TMEM86BQ8N661 226 aa-0.16□□□□□ -2.44
HDDC2-207ENST00000608532 OR51D1Q8NGF3 324 aa-0.16□□□□□ -2.44
HDDC2-207ENST00000608532 OR13C4Q8NGS5 318 aa-0.16□□□□□ -2.44
HDDC2-207ENST00000608532 SLC39A9Q9NUM3 307 aa-0.16□□□□□ -2.44
HDDC2-207ENST00000608532 JPT1Q9UK76 154 aa-0.16□□□□□ -2.44
HDDC2-207ENST00000608532 ARHGEF28Q8N1W1 1705 aaKnown RBP-0.16□□□□□ -2.44
HDDC2-207ENST00000608532 HRNRQ86YZ3 2850 aaPredicted RBP-0.16□□□□□ -2.44
HDDC2-207ENST00000608532 ABCC11Q96J66 1382 aa-0.17□□□□□ -2.44
HDDC2-207ENST00000608532 SCN8AQ9UQD0 1980 aa-0.17□□□□□ -2.44
HDDC2-207ENST00000608532 TRBV6-4A0A1B0GX49 114 aa-0.17□□□□□ -2.44
HDDC2-207ENST00000608532 TLCD2A6NGC4 264 aa-0.17□□□□□ -2.44
HDDC2-207ENST00000608532 OBSL1O75147 1896 aa-0.17□□□□□ -2.44
HDDC2-207ENST00000608532 RPS12P25398 132 aaKnown RBP-0.17□□□□□ -2.44
HDDC2-207ENST00000608532 FXYD6P3P58550 94 aa-0.17□□□□□ -2.44
HDDC2-207ENST00000608532 SKP1P63208 163 aa-0.17□□□□□ -2.44
HDDC2-207ENST00000608532 WRNQ14191 1432 aaPredicted RBP eCLIP-0.17□□□□□ -2.44
HDDC2-207ENST00000608532 HIST3H2BBQ8N257 126 aa-0.17□□□□□ -2.44
HDDC2-207ENST00000608532 OR10J5Q8NHC4 309 aa-0.17□□□□□ -2.44
HDDC2-207ENST00000608532 NHP2Q9NX24 153 aaKnown RBP-0.17□□□□□ -2.44
HDDC2-207ENST00000608532 TNFSF18Q9UNG2 199 aa-0.17□□□□□ -2.44
HDDC2-207ENST00000608532 HS3ST2Q9Y278 367 aa-0.17□□□□□ -2.44
HDDC2-207ENST00000608532 PTPRFP10586 1907 aa-0.17□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms