RNA–Protein interactions for RNA: ENST00000594387.1

IRF3-208, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-208ENST00000594387 DEFB125Q8N687 156 aa13.05□□□□□ -0.32
IRF3-208ENST00000594387 TMEM116Q8NCL8 245 aa13.05□□□□□ -0.32
IRF3-208ENST00000594387 TRIM63Q969Q1 353 aa13.05□□□□□ -0.32
IRF3-208ENST00000594387 TMEM230Q96A57 120 aa13.05□□□□□ -0.32
IRF3-208ENST00000594387 SPAG8Q99932 426 aaPredicted RBP13.05□□□□□ -0.32
IRF3-208ENST00000594387 SHPKQ9UHJ6 478 aa13.05□□□□□ -0.32
IRF3-208ENST00000594387 TRAV30A0A087WSZ9 112 aa13.04□□□□□ -0.32
IRF3-208ENST00000594387 VAMP1P23763 118 aa13.04□□□□□ -0.32
IRF3-208ENST00000594387 SMCO1Q147U7 214 aa13.04□□□□□ -0.32
IRF3-208ENST00000594387 ZNF79Q15937 498 aa13.04□□□□□ -0.32
IRF3-208ENST00000594387 AARDQ4LEZ3 155 aa13.04□□□□□ -0.32
IRF3-208ENST00000594387 ETFRF1Q6IPR1 90 aa13.04□□□□□ -0.32
IRF3-208ENST00000594387 ZNF600Q6ZNG1 722 aa13.04□□□□□ -0.32
IRF3-208ENST00000594387 OR1S1Q8NH92 325 aa13.04□□□□□ -0.32
IRF3-208ENST00000594387 SMPXQ9UHP9 88 aa13.04□□□□□ -0.32
IRF3-208ENST00000594387 COL7A1Q02388 2944 aa13.03□□□□□ -0.32
IRF3-208ENST00000594387 IGHV7-4-1A0A0J9YVY3 117 aa13.03□□□□□ -0.32
IRF3-208ENST00000594387 DUXBA0A1W2PPF3 345 aa13.03□□□□□ -0.32
IRF3-208ENST00000594387 NAP1L6A6NFF2 107 aa13.03□□□□□ -0.32
IRF3-208ENST00000594387 OR4C46A6NHA9 309 aa13.03□□□□□ -0.32
IRF3-208ENST00000594387 CENPXA8MT69 81 aa13.03□□□□□ -0.32
IRF3-208ENST00000594387 TSPAN4O14817 238 aa13.03□□□□□ -0.32
IRF3-208ENST00000594387 TMEM50AO95807 157 aa13.03□□□□□ -0.32
IRF3-208ENST00000594387 CD5P06127 495 aa13.03□□□□□ -0.32
IRF3-208ENST00000594387 SLC24A4Q8NFF2 622 aa13.03□□□□□ -0.32
IRF3-208ENST00000594387 C3orf84H3BNL1 204 aa13.02□□□□□ -0.33
IRF3-208ENST00000594387 CLN5O75503 358 aa13.02□□□□□ -0.33
IRF3-208ENST00000594387 NXPH3O95157 252 aa13.02□□□□□ -0.33
IRF3-208ENST00000594387 IFNA10P01566 189 aa13.02□□□□□ -0.33
IRF3-208ENST00000594387 CMC4P56277 68 aaPredicted RBP13.02□□□□□ -0.33
IRF3-208ENST00000594387 PAFAH1B2P68402 229 aa13.02□□□□□ -0.33
IRF3-208ENST00000594387 C2orf83Q53S99 150 aa13.02□□□□□ -0.33
IRF3-208ENST00000594387 LYZL2Q7Z4W2 148 aa13.02□□□□□ -0.33
IRF3-208ENST00000594387 CENPSQ8N2Z9 138 aa13.02□□□□□ -0.33
IRF3-208ENST00000594387 RNASEH2CQ8TDP1 164 aaKnown RBP13.02□□□□□ -0.33
IRF3-208ENST00000594387 NARS2Q96I59 477 aaKnown RBP13.02□□□□□ -0.33
IRF3-208ENST00000594387 OR10C1Q96KK4 312 aa13.02□□□□□ -0.33
IRF3-208ENST00000594387 RHPN1-AS1Q9BWJ2 59 aa13.02□□□□□ -0.33
IRF3-208ENST00000594387 PRR13Q9NZ81 148 aa13.02□□□□□ -0.33
IRF3-208ENST00000594387 A0A1B0GU03 582 aa13.01□□□□□ -0.33
IRF3-208ENST00000594387 SLC25A4P12235 298 aa13.01□□□□□ -0.33
IRF3-208ENST00000594387 SUPT4H1P63272 117 aaKnown RBP13.01□□□□□ -0.33
IRF3-208ENST00000594387 RBMS2Q15434 407 aaKnown RBP13.01□□□□□ -0.33
IRF3-208ENST00000594387 PVRIGQ6DKI7 326 aa13.01□□□□□ -0.33
IRF3-208ENST00000594387 OR4X1Q8NH49 305 aa13.01□□□□□ -0.33
IRF3-208ENST00000594387 SRRQ9GZT4 340 aa13.01□□□□□ -0.33
IRF3-208ENST00000594387 TMEM231Q9H6L2 316 aa13.01□□□□□ -0.33
IRF3-208ENST00000594387 PUS1Q9Y606 427 aaKnown RBP eCLIP13.01□□□□□ -0.33
IRF3-208ENST00000594387 U3KQ87 197 aa13.01□□□□□ -0.33
IRF3-208ENST00000594387 A0A1W2PS18 150 aa13□□□□□ -0.33
IRF3-208ENST00000594387 CHEK1O14757 476 aa13□□□□□ -0.33
IRF3-208ENST00000594387 NPY1RP25929 384 aa13□□□□□ -0.33
IRF3-208ENST00000594387 TNFRSF9Q07011 255 aa13□□□□□ -0.33
IRF3-208ENST00000594387 BSXQ3C1V8 233 aa13□□□□□ -0.33
IRF3-208ENST00000594387 TOMM20LQ6UXN7 152 aa13□□□□□ -0.33
IRF3-208ENST00000594387 WFDC10AQ9H1F0 79 aa13□□□□□ -0.33
IRF3-208ENST00000594387 LOC102724200A0A096LPH7 203 aaPredicted RBP12.99□□□□□ -0.33
IRF3-208ENST00000594387 IGHV3-49A0A0A0MS15 119 aa12.99□□□□□ -0.33
IRF3-208ENST00000594387 NPPCP23582 126 aa12.99□□□□□ -0.33
IRF3-208ENST00000594387 ATP5IP56385 69 aaPredicted RBP12.99□□□□□ -0.33
IRF3-208ENST00000594387 MUC7Q8TAX7 377 aa12.99□□□□□ -0.33
IRF3-208ENST00000594387 DTD1Q8TEA8 209 aa12.99□□□□□ -0.33
IRF3-208ENST00000594387 CITED4Q96RK1 184 aa12.99□□□□□ -0.33
IRF3-208ENST00000594387 HSPB7Q9UBY9 170 aa12.99□□□□□ -0.33
IRF3-208ENST00000594387 RBMY1BA6NDE4 496 aaKnown RBP12.98□□□□□ -0.33
IRF3-208ENST00000594387 RBMY1EA6NEQ0 496 aaKnown RBP12.98□□□□□ -0.33
IRF3-208ENST00000594387 MED6O75586 246 aa12.98□□□□□ -0.33
IRF3-208ENST00000594387 SFT2D2O95562 160 aa12.98□□□□□ -0.33
IRF3-208ENST00000594387 RBMY1DP0C7P1 496 aaKnown RBP12.98□□□□□ -0.33
IRF3-208ENST00000594387 UBE2MP61081 183 aaKnown RBP12.98□□□□□ -0.33
IRF3-208ENST00000594387 RPL11P62913 178 aaKnown RBP12.98□□□□□ -0.33
IRF3-208ENST00000594387 MLANAQ16655 118 aa12.98□□□□□ -0.33
IRF3-208ENST00000594387 NMSQ5H8A3 153 aa12.98□□□□□ -0.33
IRF3-208ENST00000594387 LINC00322Q6ZN03 302 aaPredicted RBP12.98□□□□□ -0.33
IRF3-208ENST00000594387 OR1S2Q8NGQ3 325 aa12.98□□□□□ -0.33
IRF3-208ENST00000594387 Q8WTZ3 238 aa12.98□□□□□ -0.33
IRF3-208ENST00000594387 METTL26Q96S19 204 aa12.98□□□□□ -0.33
IRF3-208ENST00000594387 RNF2Q99496 336 aa12.98□□□□□ -0.33
IRF3-208ENST00000594387 GGTLC1Q9BX51 225 aa12.98□□□□□ -0.33
IRF3-208ENST00000594387 RBKSQ9H477 322 aa12.98□□□□□ -0.33
IRF3-208ENST00000594387 FNDC4Q9H6D8 234 aaPredicted RBP12.98□□□□□ -0.33
IRF3-208ENST00000594387 UBQLN2Q9UHD9 624 aa12.98□□□□□ -0.33
IRF3-208ENST00000594387 TMED3Q9Y3Q3 217 aa12.98□□□□□ -0.33
IRF3-208ENST00000594387 IGKV3-7A0A075B6H7 116 aa12.97□□□□□ -0.33
IRF3-208ENST00000594387 IGHV3OR16-13A0A075B7E8 117 aa12.97□□□□□ -0.33
IRF3-208ENST00000594387 IGHV3-74A0A0B4J1X5 117 aa12.97□□□□□ -0.33
IRF3-208ENST00000594387 LINC00854A0A1B0GVQ3 168 aa12.97□□□□□ -0.33
IRF3-208ENST00000594387 DNASE2O00115 360 aaPredicted RBP12.97□□□□□ -0.33
IRF3-208ENST00000594387 IFNA4P05014 189 aa12.97□□□□□ -0.33
IRF3-208ENST00000594387 APOC4P55056 127 aa12.97□□□□□ -0.33
IRF3-208ENST00000594387 RPP30P78346 268 aaKnown RBP12.97□□□□□ -0.33
IRF3-208ENST00000594387 GRAMD2BQ96HH9 432 aa12.97□□□□□ -0.33
IRF3-208ENST00000594387 C7orf50Q9BRJ6 194 aaKnown RBP12.97□□□□□ -0.33
IRF3-208ENST00000594387 SLC25A6P12236 298 aa12.96□□□□□ -0.33
IRF3-208ENST00000594387 LYL1P12980 280 aa12.96□□□□□ -0.33
IRF3-208ENST00000594387 TFPI2P48307 235 aa12.96□□□□□ -0.33
IRF3-208ENST00000594387 RND2P52198 227 aa12.96□□□□□ -0.33
IRF3-208ENST00000594387 RAB11AP62491 216 aa12.96□□□□□ -0.33
IRF3-208ENST00000594387 PPP1R1AQ13522 171 aa12.96□□□□□ -0.33
IRF3-208ENST00000594387 BAK1Q16611 211 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms